FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5714, 786 aa 1>>>pF1KE5714 786 - 786 aa - 786 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.2690+/-0.000925; mu= 15.2720+/- 0.056 mean_var=75.2737+/-14.946, 0's: 0 Z-trim(106.1): 23 B-trim: 0 in 0/51 Lambda= 0.147827 statistics sampled from 8804 (8808) to 8804 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.641), E-opt: 0.2 (0.271), width: 16 Scan time: 2.600 The best scores are: opt bits E(32554) CCDS7287.1 SUPV3L1 gene_id:6832|Hs108|chr10 ( 786) 5261 1131.8 0 >>CCDS7287.1 SUPV3L1 gene_id:6832|Hs108|chr10 (786 aa) initn: 5261 init1: 5261 opt: 5261 Z-score: 6058.2 bits: 1131.8 E(32554): 0 Smith-Waterman score: 5261; 100.0% identity (100.0% similar) in 786 aa overlap (1-786:1-786) 10 20 30 40 50 60 pF1KE5 MSFSRALLWARLPAGRQAGHRAAICSALRPHFGPFPGVLGQVSVLATASSSASGGSKIPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 MSFSRALLWARLPAGRQAGHRAAICSALRPHFGPFPGVLGQVSVLATASSSASGGSKIPN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 TSLFVPLTVKPQGPSADGDVGAELTRPLDKNEVKKVLDKFYKRKEIQKLGADYGLDARLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 TSLFVPLTVKPQGPSADGDVGAELTRPLDKNEVKKVLDKFYKRKEIQKLGADYGLDARLF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 HQAFISFRNYIMQSHSLDVDIHIVLNDICFGAAHADDLFPFFLRHAKQIFPVLDCKDDLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 HQAFISFRNYIMQSHSLDVDIHIVLNDICFGAAHADDLFPFFLRHAKQIFPVLDCKDDLR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 KISDLRIPPNWYPDARAMQRKIIFHSGPTNSGKTYHAIQKYFSAKSGVYCGPLKLLAHEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 KISDLRIPPNWYPDARAMQRKIIFHSGPTNSGKTYHAIQKYFSAKSGVYCGPLKLLAHEI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 FEKSNAAGVPCDLVTGEERVTVQPNGKQASHVSCTVEMCSVTTPYEVAVIDEIQMIRDPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 FEKSNAAGVPCDLVTGEERVTVQPNGKQASHVSCTVEMCSVTTPYEVAVIDEIQMIRDPA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 RGWAWTRALLGLCAEEVHLCGEPAAIDLVMELMYTTGEEVEVRDYKRLTPISVLDHALES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 RGWAWTRALLGLCAEEVHLCGEPAAIDLVMELMYTTGEEVEVRDYKRLTPISVLDHALES 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 LDNLRPGDCIVCFSKNDIYSVSRQIEIRGLESAVIYGSLPPGTKLAQAKKFNDPNDPCKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 LDNLRPGDCIVCFSKNDIYSVSRQIEIRGLESAVIYGSLPPGTKLAQAKKFNDPNDPCKI 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 LVATDAIGMGLNLSIRRIIFYSLIKPSINEKGERELEPITTSQALQIAGRAGRFSSRFKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 LVATDAIGMGLNLSIRRIIFYSLIKPSINEKGERELEPITTSQALQIAGRAGRFSSRFKE 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 GEVTTMNHEDLSLLKEILKRPVDPIRAAGLHPTAEQIEMFAYHLPDATLSNLIDIFVDFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 GEVTTMNHEDLSLLKEILKRPVDPIRAAGLHPTAEQIEMFAYHLPDATLSNLIDIFVDFS 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE5 QVDGQYFVCNMDDFKFSAELIQHIPLSLRVRYVFCTAPINKKQPFVCSSLLQFARQYSRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 QVDGQYFVCNMDDFKFSAELIQHIPLSLRVRYVFCTAPINKKQPFVCSSLLQFARQYSRN 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE5 EPLTFAWLRRYIKWPLLPPKNIKDLMDLEAVHDVLDLYLWLSYRFMDMFPDASLIRDLQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 EPLTFAWLRRYIKWPLLPPKNIKDLMDLEAVHDVLDLYLWLSYRFMDMFPDASLIRDLQK 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE5 ELDGIIQDGVHNITKLIKMSETHKLLNLEGFPSGSQSRLSGTLKSQARRTRGTKALGSKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 ELDGIIQDGVHNITKLIKMSETHKLLNLEGFPSGSQSRLSGTLKSQARRTRGTKALGSKA 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE5 TEPPSPDAGELSLASRLVQQGLLTPDMLKQLEKEWMTQQTEHNKEKTESGTHPKGTRRKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 TEPPSPDAGELSLASRLVQQGLLTPDMLKQLEKEWMTQQTEHNKEKTESGTHPKGTRRKK 730 740 750 760 770 780 pF1KE5 KEPDSD :::::: CCDS72 KEPDSD 786 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 06:00:21 2016 done: Tue Nov 8 06:00:22 2016 Total Scan time: 2.600 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]