FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5520, 464 aa 1>>>pF1KE5520 464 - 464 aa - 464 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2471+/-0.000408; mu= 17.7872+/- 0.025 mean_var=69.7109+/-14.047, 0's: 0 Z-trim(110.9): 160 B-trim: 71 in 1/52 Lambda= 0.153612 statistics sampled from 19167 (19344) to 19167 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.59), E-opt: 0.2 (0.227), width: 16 Scan time: 5.440 The best scores are: opt bits E(85289) NP_006520 (OMIM: 600421) glycine receptor subunit ( 464) 3128 702.8 4.9e-202 XP_016864119 (OMIM: 600421) PREDICTED: glycine rec ( 424) 2872 646.1 5.5e-185 NP_001139512 (OMIM: 138491,149400) glycine recepto ( 457) 2504 564.5 2.1e-160 NP_001036008 (OMIM: 600421) glycine receptor subun ( 449) 2391 539.5 7.1e-153 NP_000162 (OMIM: 138491,149400) glycine receptor s ( 449) 2387 538.6 1.3e-152 XP_016864838 (OMIM: 138491,149400) PREDICTED: glyc ( 465) 2365 533.7 4e-151 XP_011530569 (OMIM: 600421) PREDICTED: glycine rec ( 313) 2076 469.6 5.5e-132 XP_016884916 (OMIM: 305990) PREDICTED: glycine rec ( 452) 2030 459.5 8.6e-129 NP_001112358 (OMIM: 305990) glycine receptor subun ( 452) 2030 459.5 8.6e-129 NP_001112357 (OMIM: 305990) glycine receptor subun ( 452) 2024 458.1 2.2e-128 NP_002054 (OMIM: 305990) glycine receptor subunit ( 452) 2024 458.1 2.2e-128 XP_011543797 (OMIM: 305990) PREDICTED: glycine rec ( 436) 2022 457.7 2.9e-128 XP_006724550 (OMIM: 305990) PREDICTED: glycine rec ( 436) 2022 457.7 2.9e-128 XP_011543798 (OMIM: 305990) PREDICTED: glycine rec ( 436) 2022 457.7 2.9e-128 NP_001278929 (OMIM: 138491,149400) glycine recepto ( 366) 1977 447.7 2.5e-125 XP_011530570 (OMIM: 600421) PREDICTED: glycine rec ( 269) 1811 410.8 2.3e-114 XP_016884918 (OMIM: 305990) PREDICTED: glycine rec ( 363) 1696 385.4 1.4e-106 XP_016884917 (OMIM: 305990) PREDICTED: glycine rec ( 363) 1696 385.4 1.4e-106 NP_001165413 (OMIM: 305990) glycine receptor subun ( 363) 1696 385.4 1.4e-106 NP_001159532 (OMIM: 138492,614619) glycine recepto ( 497) 1218 279.6 1.4e-74 NP_000815 (OMIM: 138492,614619) glycine receptor s ( 497) 1218 279.6 1.4e-74 XP_016863524 (OMIM: 138492,614619) PREDICTED: glyc ( 303) 1040 240.0 6.9e-63 NP_001159533 (OMIM: 138492,614619) glycine recepto ( 303) 1040 240.0 6.9e-63 XP_016863523 (OMIM: 138492,614619) PREDICTED: glyc ( 399) 1033 238.5 2.5e-62 NP_000802 (OMIM: 137143) gamma-aminobutyric acid r ( 453) 978 226.3 1.3e-58 NP_000806 (OMIM: 137163,613060) gamma-aminobutyric ( 452) 965 223.5 9.7e-58 XP_011539496 (OMIM: 137163,613060) PREDICTED: gamm ( 465) 965 223.5 9.9e-58 XP_016863472 (OMIM: 103780,137140) PREDICTED: gamm ( 451) 963 223.0 1.3e-57 XP_016863471 (OMIM: 103780,137140) PREDICTED: gamm ( 451) 963 223.0 1.3e-57 NP_000798 (OMIM: 103780,137140) gamma-aminobutyric ( 451) 963 223.0 1.3e-57 NP_001107647 (OMIM: 103780,137140) gamma-aminobuty ( 451) 963 223.0 1.3e-57 XP_016856425 (OMIM: 137163,613060) PREDICTED: gamm ( 687) 965 223.6 1.4e-57 NP_068712 (OMIM: 137192,612269,617113) gamma-amino ( 473) 943 218.6 2.9e-56 NP_000805 (OMIM: 137192,612269,617113) gamma-amino ( 473) 940 217.9 4.7e-56 NP_000804 (OMIM: 600232) gamma-aminobutyric acid r ( 474) 940 217.9 4.7e-56 NP_068711 (OMIM: 600232) gamma-aminobutyric acid r ( 512) 940 218.0 5e-56 NP_001121117 (OMIM: 137160,611136,615744) gamma-am ( 456) 939 217.7 5.3e-56 NP_001121116 (OMIM: 137160,611136,615744) gamma-am ( 456) 939 217.7 5.3e-56 NP_001121115 (OMIM: 137160,611136,615744) gamma-am ( 456) 939 217.7 5.3e-56 NP_001121120 (OMIM: 137160,611136,615744) gamma-am ( 456) 939 217.7 5.3e-56 NP_000797 (OMIM: 137160,611136,615744) gamma-amino ( 456) 939 217.7 5.3e-56 NP_002034 (OMIM: 137162) gamma-aminobutyric acid r ( 465) 939 217.7 5.4e-56 NP_055026 (OMIM: 602729) gamma-aminobutyric acid r ( 440) 937 217.2 7e-56 NP_000807 (OMIM: 137164,607681,611277) gamma-amino ( 467) 934 216.6 1.2e-55 NP_000799 (OMIM: 305660) gamma-aminobutyric acid r ( 492) 929 215.5 2.6e-55 NP_000803 (OMIM: 137190,617153) gamma-aminobutyric ( 474) 928 215.3 3e-55 NP_001243632 (OMIM: 137161) gamma-aminobutyric aci ( 462) 927 215.0 3.4e-55 NP_002033 (OMIM: 137161) gamma-aminobutyric acid r ( 479) 927 215.1 3.5e-55 NP_775807 (OMIM: 137166) gamma-aminobutyric acid r ( 465) 925 214.6 4.6e-55 NP_944494 (OMIM: 137164,607681,611277) gamma-amino ( 475) 921 213.7 8.7e-55 >>NP_006520 (OMIM: 600421) glycine receptor subunit alph (464 aa) initn: 3128 init1: 3128 opt: 3128 Z-score: 3748.1 bits: 702.8 E(85289): 4.9e-202 Smith-Waterman score: 3128; 100.0% identity (100.0% similar) in 464 aa overlap (1-464:1-464) 10 20 30 40 50 60 pF1KE5 MAHVRHFRTLVSGFYFWEAALLLSLVATKETDSARSRSAPMSPSDFLDKLMGRTSGYDAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 MAHVRHFRTLVSGFYFWEAALLLSLVATKETDSARSRSAPMSPSDFLDKLMGRTSGYDAR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 IRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDSLDLDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 IRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDSLDLDP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 SMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 SMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPM 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 DVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 DVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 TCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 TCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 SGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRKNKTEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 SGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRKNKTEA 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 FALEKFYRFSDMDDEVRESRFSFTAYGMGPCLQAKDGMTPKGPNHPVQVMPKSPDEMRKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 FALEKFYRFSDMDDEVRESRFSFTAYGMGPCLQAKDGMTPKGPNHPVQVMPKSPDEMRKV 370 380 390 400 410 420 430 440 450 460 pF1KE5 FIDRAKKIDTISRACFPLAFLIFNIFYWVIYKILRHEDIHQQQD :::::::::::::::::::::::::::::::::::::::::::: NP_006 FIDRAKKIDTISRACFPLAFLIFNIFYWVIYKILRHEDIHQQQD 430 440 450 460 >>XP_016864119 (OMIM: 600421) PREDICTED: glycine recepto (424 aa) initn: 2872 init1: 2872 opt: 2872 Z-score: 3442.1 bits: 646.1 E(85289): 5.5e-185 Smith-Waterman score: 2872; 100.0% identity (100.0% similar) in 424 aa overlap (41-464:1-424) 20 30 40 50 60 70 pF1KE5 VSGFYFWEAALLLSLVATKETDSARSRSAPMSPSDFLDKLMGRTSGYDARIRPNFKGPPV :::::::::::::::::::::::::::::: XP_016 MSPSDFLDKLMGRTSGYDARIRPNFKGPPV 10 20 30 80 90 100 110 120 130 pF1KE5 NVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDSLDLDPSMLDSIWKPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDSLDLDPSMLDSIWKPD 40 50 60 70 80 90 140 150 160 170 180 190 pF1KE5 LFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLE 100 110 120 130 140 150 200 210 220 230 240 250 pF1KE5 SFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLE 160 170 180 190 200 210 260 270 280 290 300 310 pF1KE5 RQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKV 220 230 240 250 260 270 320 330 340 350 360 370 pF1KE5 SYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRKNKTEAFALEKFYRFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRKNKTEAFALEKFYRFS 280 290 300 310 320 330 380 390 400 410 420 430 pF1KE5 DMDDEVRESRFSFTAYGMGPCLQAKDGMTPKGPNHPVQVMPKSPDEMRKVFIDRAKKIDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DMDDEVRESRFSFTAYGMGPCLQAKDGMTPKGPNHPVQVMPKSPDEMRKVFIDRAKKIDT 340 350 360 370 380 390 440 450 460 pF1KE5 ISRACFPLAFLIFNIFYWVIYKILRHEDIHQQQD :::::::::::::::::::::::::::::::::: XP_016 ISRACFPLAFLIFNIFYWVIYKILRHEDIHQQQD 400 410 420 >>NP_001139512 (OMIM: 138491,149400) glycine receptor su (457 aa) initn: 2457 init1: 2320 opt: 2504 Z-score: 3000.8 bits: 564.5 E(85289): 2.1e-160 Smith-Waterman score: 2504; 81.5% identity (93.2% similar) in 455 aa overlap (14-462:9-457) 10 20 30 40 50 60 pF1KE5 MAHVRHFRTLVSGFYFWEAALLLSLVATKETDSARSRSAPMSPSDFLDKLMGRTSGYDAR .:.::. ...::.:.::...::: ::::::::::::::::::::: NP_001 MYSFNTLRLYLWETIVFFSLAASKEAEAARSAPKPMSPSDFLDKLMGRTSGYDAR 10 20 30 40 50 70 80 90 100 110 120 pF1KE5 IRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDSLDLDP ::::::::::::.::::::::::::::::::::::::::.::::::::.::::::::::: NP_001 IRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDP 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE5 SMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPM :::::::::::::::::::.:::.::::::::: .:::::::::.::::.:::::::::: NP_001 SMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPM 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE5 DVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKF ::::::::::::::::::::::::... ::::.:::::::.::::::::::::::::::: NP_001 DVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKF 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE5 TCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQS ::::.:::::::::::::::::::::::::::.:::::::::::::.::::::::::::: NP_001 TCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQS 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE5 SGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRKNKTEA ::::::::::::::::::::::::::::::::::::::::::::::::::::::... .. NP_001 SGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRRHH-KS 300 310 320 330 340 350 370 380 390 400 410 pF1KE5 FALEKFYRFSDMDDEVRESRFSFTAYGMGP-CLQAKDGMTPKGPNHPVQVMP-----KSP :. : ..::. :.::.:.:::::: :::::::.. :: :. . : ::: NP_001 PMLNLF-----QEDEAGEGRFNFSAYGMGPACLQAKDGISVKGANNSNTTNPPPAPSKSP 360 370 380 390 400 420 430 440 450 460 pF1KE5 DEMRKVFIDRAKKIDTISRACFPLAFLIFNIFYWVIYKILRHEDIHQQQD .::::.::.:::::: ::: ::.::::::.:::.::::.:.::.:.: NP_001 EEMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIYKIVRREDVHNQ 410 420 430 440 450 >>NP_001036008 (OMIM: 600421) glycine receptor subunit a (449 aa) initn: 2385 init1: 2385 opt: 2391 Z-score: 2865.6 bits: 539.5 E(85289): 7.1e-153 Smith-Waterman score: 2991; 96.8% identity (96.8% similar) in 464 aa overlap (1-464:1-449) 10 20 30 40 50 60 pF1KE5 MAHVRHFRTLVSGFYFWEAALLLSLVATKETDSARSRSAPMSPSDFLDKLMGRTSGYDAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MAHVRHFRTLVSGFYFWEAALLLSLVATKETDSARSRSAPMSPSDFLDKLMGRTSGYDAR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 IRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDSLDLDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDSLDLDP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 SMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPM 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 DVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 TCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 SGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRKNKTEA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRKNK--- 310 320 330 340 350 370 380 390 400 410 420 pF1KE5 FALEKFYRFSDMDDEVRESRFSFTAYGMGPCLQAKDGMTPKGPNHPVQVMPKSPDEMRKV :::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ------------DDEVRESRFSFTAYGMGPCLQAKDGMTPKGPNHPVQVMPKSPDEMRKV 360 370 380 390 400 430 440 450 460 pF1KE5 FIDRAKKIDTISRACFPLAFLIFNIFYWVIYKILRHEDIHQQQD :::::::::::::::::::::::::::::::::::::::::::: NP_001 FIDRAKKIDTISRACFPLAFLIFNIFYWVIYKILRHEDIHQQQD 410 420 430 440 >>NP_000162 (OMIM: 138491,149400) glycine receptor subun (449 aa) initn: 2457 init1: 2136 opt: 2387 Z-score: 2860.8 bits: 538.6 E(85289): 1.3e-152 Smith-Waterman score: 2494; 81.3% identity (91.9% similar) in 455 aa overlap (14-462:9-449) 10 20 30 40 50 60 pF1KE5 MAHVRHFRTLVSGFYFWEAALLLSLVATKETDSARSRSAPMSPSDFLDKLMGRTSGYDAR .:.::. ...::.:.::...::: ::::::::::::::::::::: NP_000 MYSFNTLRLYLWETIVFFSLAASKEAEAARSAPKPMSPSDFLDKLMGRTSGYDAR 10 20 30 40 50 70 80 90 100 110 120 pF1KE5 IRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDSLDLDP ::::::::::::.::::::::::::::::::::::::::.::::::::.::::::::::: NP_000 IRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDP 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE5 SMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPM :::::::::::::::::::.:::.::::::::: .:::::::::.::::.:::::::::: NP_000 SMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPM 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE5 DVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKF ::::::::::::::::::::::::... ::::.:::::::.::::::::::::::::::: NP_000 DVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKF 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE5 TCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQS ::::.:::::::::::::::::::::::::::.:::::::::::::.::::::::::::: NP_000 TCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQS 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE5 SGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRKNKTEA ::::::::::::::::::::::::::::::::::::::::::::::::::::::... : NP_000 SGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRRHHKE- 300 310 320 330 340 350 370 380 390 400 410 pF1KE5 FALEKFYRFSDMDDEVRESRFSFTAYGMGP-CLQAKDGMTPKGPNHPVQVMP-----KSP ::. :.::.:.:::::: :::::::.. :: :. . : ::: NP_000 -------------DEAGEGRFNFSAYGMGPACLQAKDGISVKGANNSNTTNPPPAPSKSP 360 370 380 390 400 420 430 440 450 460 pF1KE5 DEMRKVFIDRAKKIDTISRACFPLAFLIFNIFYWVIYKILRHEDIHQQQD .::::.::.:::::: ::: ::.::::::.:::.::::.:.::.:.: NP_000 EEMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIYKIVRREDVHNQ 410 420 430 440 >>XP_016864838 (OMIM: 138491,149400) PREDICTED: glycine (465 aa) initn: 2435 init1: 2114 opt: 2365 Z-score: 2834.2 bits: 533.7 E(85289): 4e-151 Smith-Waterman score: 2472; 82.4% identity (92.0% similar) in 448 aa overlap (21-462:32-465) 10 20 30 40 50 pF1KE5 MAHVRHFRTLVSGFYFWEAALLLSLVATKETDSARSRSAPMSPSDFLDKL .::::.:.::...::: ::::::::::: XP_016 GIQPNLEPTLIKGNLYQHEKEPSLTFCSPLFLLSLAASKEAEAARSAPKPMSPSDFLDKL 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE5 MGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSE ::::::::::::::::::::::.::::::::::::::::::::::::::.::::::::.: XP_016 MGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNE 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE5 YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLS :::::::::::::::::::::::::::::.:::.::::::::: .:::::::::.::::. XP_016 YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLA 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE5 CPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRY ::::::::::::::::::::::::::::::::::... ::::.:::::::.::::::::: XP_016 CPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRY 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE5 CTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGI ::::::::::::::.:::::::::::::::::::::::::::.:::::::::::::.::: XP_016 CTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGI 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE5 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRF 310 320 330 340 350 360 360 370 380 390 400 pF1KE5 RRKRKNKTEAFALEKFYRFSDMDDEVRESRFSFTAYGMGP-CLQAKDGMTPKGPNHPVQV ::::... : ::. :.::.:.:::::: :::::::.. :: :. . XP_016 RRKRRHHKE--------------DEAGEGRFNFSAYGMGPACLQAKDGISVKGANNSNTT 370 380 390 400 410 420 430 440 450 460 pF1KE5 MP-----KSPDEMRKVFIDRAKKIDTISRACFPLAFLIFNIFYWVIYKILRHEDIHQQQD : :::.::::.::.:::::: ::: ::.::::::.:::.::::.:.::.:.: XP_016 NPPPAPSKSPEEMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIYKIVRREDVHNQ 410 420 430 440 450 460 >>XP_011530569 (OMIM: 600421) PREDICTED: glycine recepto (313 aa) initn: 2122 init1: 2076 opt: 2076 Z-score: 2490.6 bits: 469.6 E(85289): 5.5e-132 Smith-Waterman score: 2076; 99.4% identity (100.0% similar) in 311 aa overlap (1-311:1-311) 10 20 30 40 50 60 pF1KE5 MAHVRHFRTLVSGFYFWEAALLLSLVATKETDSARSRSAPMSPSDFLDKLMGRTSGYDAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MAHVRHFRTLVSGFYFWEAALLLSLVATKETDSARSRSAPMSPSDFLDKLMGRTSGYDAR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 IRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDSLDLDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 IRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDSLDLDP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 SMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPM 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 DVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 DVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 TCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 SGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRKNKTEA :::::::::.. XP_011 SGSRASLPKANVS 310 >>XP_016884916 (OMIM: 305990) PREDICTED: glycine recepto (452 aa) initn: 2388 init1: 2015 opt: 2030 Z-score: 2433.2 bits: 459.5 E(85289): 8.6e-129 Smith-Waterman score: 2387; 78.8% identity (88.8% similar) in 457 aa overlap (9-462:10-452) 10 20 30 40 50 pF1KE5 MAHVRHFRTLVSGFYFWEAALLLSLVATKETDSARSRSAPMSPSDFLDKLMGRTSGYDA : . .:.. . .. ... :... : .:::::::::::::::::: XP_016 MNRQLVNILTALFAFFLETNHFRTAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDA 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE5 RIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDSLDLD ::::::::::::::::::::::::::::::::::::::::.::: ::::::::::::::: XP_016 RIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLD 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE5 PSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFP :::::::::::::::::::::::.:::::::::: :::.::::::::::::::::::::: XP_016 PSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFP 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE5 MDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGK :::::: ::::::::::::::::: ...:::::::::::::.:::::.: :::::::::: XP_016 MDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGK 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE5 FTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQ ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQ 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE5 SSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRR--KRKNK :::::::::::::::::::::::::::::.:::::::::::::::::.::.:: ::.:: XP_016 SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQNK 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE5 TEAFALEKFYRFSDMDDEVRESRFSFTAYGMGPCLQAKDGMTPKG-PNHPVQVMPKSPDE : : .:::::.:..:::: :::.::: . :. : .:. ::. : XP_016 EE--------------DVTRESRFNFSGYGMGHCLQVKDGTAVKATPANPLPQPPKDGDA 370 380 390 400 420 430 440 450 460 pF1KE5 MRKVFIDRAKKIDTISRACFPLAFLIFNIFYWVIYKILRHEDIHQQQD ..: :.::::.::::::: :::::::::::::. :::.::::.:.. XP_016 IKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWITYKIIRHEDVHKK 410 420 430 440 450 >>NP_001112358 (OMIM: 305990) glycine receptor subunit a (452 aa) initn: 2388 init1: 2015 opt: 2030 Z-score: 2433.2 bits: 459.5 E(85289): 8.6e-129 Smith-Waterman score: 2387; 78.8% identity (88.8% similar) in 457 aa overlap (9-462:10-452) 10 20 30 40 50 pF1KE5 MAHVRHFRTLVSGFYFWEAALLLSLVATKETDSARSRSAPMSPSDFLDKLMGRTSGYDA : . .:.. . .. ... :... : .:::::::::::::::::: NP_001 MNRQLVNILTALFAFFLETNHFRTAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDA 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE5 RIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDSLDLD ::::::::::::::::::::::::::::::::::::::::.::: ::::::::::::::: NP_001 RIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLD 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE5 PSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFP :::::::::::::::::::::::.:::::::::: :::.::::::::::::::::::::: NP_001 PSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFP 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE5 MDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGK :::::: ::::::::::::::::: ...:::::::::::::.:::::.: :::::::::: NP_001 MDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGK 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE5 FTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQ ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQ 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE5 SSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRR--KRKNK :::::::::::::::::::::::::::::.:::::::::::::::::.::.:: ::.:: NP_001 SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQNK 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE5 TEAFALEKFYRFSDMDDEVRESRFSFTAYGMGPCLQAKDGMTPKG-PNHPVQVMPKSPDE : : .:::::.:..:::: :::.::: . :. : .:. ::. : NP_001 EE--------------DVTRESRFNFSGYGMGHCLQVKDGTAVKATPANPLPQPPKDGDA 370 380 390 400 420 430 440 450 460 pF1KE5 MRKVFIDRAKKIDTISRACFPLAFLIFNIFYWVIYKILRHEDIHQQQD ..: :.::::.::::::: :::::::::::::. :::.::::.:.. NP_001 IKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWITYKIIRHEDVHKK 410 420 430 440 450 >>NP_001112357 (OMIM: 305990) glycine receptor subunit a (452 aa) initn: 2382 init1: 2009 opt: 2024 Z-score: 2426.0 bits: 458.1 E(85289): 2.2e-128 Smith-Waterman score: 2381; 78.3% identity (88.8% similar) in 457 aa overlap (9-462:10-452) 10 20 30 40 50 pF1KE5 MAHVRHFRTLVSGFYFWEAALLLSLVATKETDSARSRSAPMSPSDFLDKLMGRTSGYDA : . .:.. . .. ... :... : .:::::::::::::::::: NP_001 MNRQLVNILTALFAFFLETNHFRTAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDA 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE5 RIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDSLDLD ::::::::::::::::::::::::..::::::::::::::.::: ::::::::::::::: NP_001 RIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLD 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE5 PSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFP :::::::::::::::::::::::.:::::::::: :::.::::::::::::::::::::: NP_001 PSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFP 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE5 MDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGK :::::: ::::::::::::::::: ...:::::::::::::.:::::.: :::::::::: NP_001 MDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGK 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE5 FTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQ ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQ 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE5 SSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRR--KRKNK :::::::::::::::::::::::::::::.:::::::::::::::::.::.:: ::.:: NP_001 SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQNK 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE5 TEAFALEKFYRFSDMDDEVRESRFSFTAYGMGPCLQAKDGMTPKG-PNHPVQVMPKSPDE : : .:::::.:..:::: :::.::: . :. : .:. ::. : NP_001 EE--------------DVTRESRFNFSGYGMGHCLQVKDGTAVKATPANPLPQPPKDGDA 370 380 390 400 420 430 440 450 460 pF1KE5 MRKVFIDRAKKIDTISRACFPLAFLIFNIFYWVIYKILRHEDIHQQQD ..: :.::::.::::::: :::::::::::::. :::.::::.:.. NP_001 IKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWITYKIIRHEDVHKK 410 420 430 440 450 464 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 01:26:23 2016 done: Tue Nov 8 01:26:24 2016 Total Scan time: 5.440 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]