FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6148, 102 aa 1>>>pF1KE6148 102 - 102 aa - 102 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9090+/-0.000235; mu= 12.2154+/- 0.015 mean_var=58.6707+/-11.555, 0's: 0 Z-trim(122.6): 6 B-trim: 0 in 0/54 Lambda= 0.167442 statistics sampled from 41096 (41102) to 41096 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.834), E-opt: 0.2 (0.482), width: 16 Scan time: 4.260 The best scores are: opt bits E(85289) NP_001305151 (OMIM: 605821) alpha-hemoglobin-stabi ( 102) 673 169.4 9.2e-43 NP_057717 (OMIM: 605821) alpha-hemoglobin-stabiliz ( 102) 673 169.4 9.2e-43 NP_001305150 (OMIM: 605821) alpha-hemoglobin-stabi ( 102) 673 169.4 9.2e-43 >>NP_001305151 (OMIM: 605821) alpha-hemoglobin-stabilizi (102 aa) initn: 673 init1: 673 opt: 673 Z-score: 888.7 bits: 169.4 E(85289): 9.2e-43 Smith-Waterman score: 673; 100.0% identity (100.0% similar) in 102 aa overlap (1-102:1-102) 10 20 30 40 50 60 pF1KE6 MALLKANKDLISAGLKEFSVLLNQQVFNDPLVSEEDMVTVVEDWMNFYINYYRQQVTGEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MALLKANKDLISAGLKEFSVLLNQQVFNDPLVSEEDMVTVVEDWMNFYINYYRQQVTGEP 10 20 30 40 50 60 70 80 90 100 pF1KE6 QERDKALQELRQELNTLANPFLAKYRDFLKSHELPSHPPPSS :::::::::::::::::::::::::::::::::::::::::: NP_001 QERDKALQELRQELNTLANPFLAKYRDFLKSHELPSHPPPSS 70 80 90 100 >>NP_057717 (OMIM: 605821) alpha-hemoglobin-stabilizing (102 aa) initn: 673 init1: 673 opt: 673 Z-score: 888.7 bits: 169.4 E(85289): 9.2e-43 Smith-Waterman score: 673; 100.0% identity (100.0% similar) in 102 aa overlap (1-102:1-102) 10 20 30 40 50 60 pF1KE6 MALLKANKDLISAGLKEFSVLLNQQVFNDPLVSEEDMVTVVEDWMNFYINYYRQQVTGEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 MALLKANKDLISAGLKEFSVLLNQQVFNDPLVSEEDMVTVVEDWMNFYINYYRQQVTGEP 10 20 30 40 50 60 70 80 90 100 pF1KE6 QERDKALQELRQELNTLANPFLAKYRDFLKSHELPSHPPPSS :::::::::::::::::::::::::::::::::::::::::: NP_057 QERDKALQELRQELNTLANPFLAKYRDFLKSHELPSHPPPSS 70 80 90 100 >>NP_001305150 (OMIM: 605821) alpha-hemoglobin-stabilizi (102 aa) initn: 673 init1: 673 opt: 673 Z-score: 888.7 bits: 169.4 E(85289): 9.2e-43 Smith-Waterman score: 673; 100.0% identity (100.0% similar) in 102 aa overlap (1-102:1-102) 10 20 30 40 50 60 pF1KE6 MALLKANKDLISAGLKEFSVLLNQQVFNDPLVSEEDMVTVVEDWMNFYINYYRQQVTGEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MALLKANKDLISAGLKEFSVLLNQQVFNDPLVSEEDMVTVVEDWMNFYINYYRQQVTGEP 10 20 30 40 50 60 70 80 90 100 pF1KE6 QERDKALQELRQELNTLANPFLAKYRDFLKSHELPSHPPPSS :::::::::::::::::::::::::::::::::::::::::: NP_001 QERDKALQELRQELNTLANPFLAKYRDFLKSHELPSHPPPSS 70 80 90 100 102 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 09:52:27 2016 done: Tue Nov 8 09:52:27 2016 Total Scan time: 4.260 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]