FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2215, 452 aa 1>>>pF1KE2215 452 - 452 aa - 452 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.8850+/-0.000452; mu= 10.9319+/- 0.028 mean_var=132.8865+/-26.419, 0's: 0 Z-trim(114.0): 56 B-trim: 192 in 1/53 Lambda= 0.111259 statistics sampled from 23531 (23582) to 23531 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.648), E-opt: 0.2 (0.276), width: 16 Scan time: 9.490 The best scores are: opt bits E(85289) NP_006342 (OMIM: 605058) mitochondrial import inne ( 452) 2956 486.3 7.1e-137 >>NP_006342 (OMIM: 605058) mitochondrial import inner me (452 aa) initn: 2956 init1: 2956 opt: 2956 Z-score: 2578.3 bits: 486.3 E(85289): 7.1e-137 Smith-Waterman score: 2956; 100.0% identity (100.0% similar) in 452 aa overlap (1-452:1-452) 10 20 30 40 50 60 pF1KE2 MAAAALRSGWCRCPRRCLGSGIQFLSSHNLPHGSTYQMRRPGGELPLSKSYSSGNRKGFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 MAAAALRSGWCRCPRRCLGSGIQFLSSHNLPHGSTYQMRRPGGELPLSKSYSSGNRKGFL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 SGLLDNVKQELAKNKEMKESIKKFRDEARRLEESDVLQEARRKYKTIESETVRTSEVLRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 SGLLDNVKQELAKNKEMKESIKKFRDEARRLEESDVLQEARRKYKTIESETVRTSEVLRK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 KLGELTGTVKESLHEVSKSDLGRKIKEGVEEAAKTAKQSAESVSKGGEKLGRTAAFRALS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 KLGELTGTVKESLHEVSKSDLGRKIKEGVEEAAKTAKQSAESVSKGGEKLGRTAAFRALS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 QGVESVKKEIDDSVLGQTGPYRRPQRLRKRTEFAGDKFKEEKVFEPNEEALGVVLHKDSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 QGVESVKKEIDDSVLGQTGPYRRPQRLRKRTEFAGDKFKEEKVFEPNEEALGVVLHKDSK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 WYQQWKDFKENNVVFNRFFEMKMKYDESDNAFIRASRALTDKVTDLLGGLFSKTEMSEVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 WYQQWKDFKENNVVFNRFFEMKMKYDESDNAFIRASRALTDKVTDLLGGLFSKTEMSEVL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 TEILRVDPAFDKDRFLKQCENDIIPNVLEAMISGELDILKDWCYEATYSQLAHPIQQAKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 TEILRVDPAFDKDRFLKQCENDIIPNVLEAMISGELDILKDWCYEATYSQLAHPIQQAKA 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 LGLQFHSRILDIDNVDLAMGKMMEQGPVLIITFQAQLVMVVRNPKGEVVEGDPDKVLRML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 LGLQFHSRILDIDNVDLAMGKMMEQGPVLIITFQAQLVMVVRNPKGEVVEGDPDKVLRML 370 380 390 400 410 420 430 440 450 pF1KE2 YVWALCRDQDELNPYAAWRLLDISASSTEQIL :::::::::::::::::::::::::::::::: NP_006 YVWALCRDQDELNPYAAWRLLDISASSTEQIL 430 440 450 452 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 23:59:43 2016 done: Sun Nov 6 23:59:44 2016 Total Scan time: 9.490 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]