FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB6451, 318 aa 1>>>pF1KB6451 318 - 318 aa - 318 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.2497+/-0.000956; mu= 1.8157+/- 0.058 mean_var=347.7844+/-70.957, 0's: 0 Z-trim(116.7): 14 B-trim: 166 in 1/53 Lambda= 0.068773 statistics sampled from 17344 (17354) to 17344 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.824), E-opt: 0.2 (0.533), width: 16 Scan time: 3.030 The best scores are: opt bits E(32554) CCDS3135.1 PLSCR1 gene_id:5359|Hs108|chr3 ( 318) 2326 243.7 1.5e-64 CCDS75029.1 PLSCR2 gene_id:57047|Hs108|chr3 ( 293) 1497 161.4 7.9e-40 CCDS56284.1 PLSCR2 gene_id:57047|Hs108|chr3 ( 297) 1489 160.6 1.4e-39 CCDS3134.1 PLSCR2 gene_id:57047|Hs108|chr3 ( 224) 1375 149.1 2.9e-36 CCDS46931.1 PLSCR5 gene_id:389158|Hs108|chr3 ( 271) 1060 118.0 8.5e-27 CCDS42253.1 PLSCR3 gene_id:57048|Hs108|chr17 ( 295) 1038 115.8 4.1e-26 CCDS3133.1 PLSCR4 gene_id:57088|Hs108|chr3 ( 329) 1010 113.1 3e-25 CCDS82853.1 PLSCR5 gene_id:389158|Hs108|chr3 ( 259) 988 110.8 1.2e-24 >>CCDS3135.1 PLSCR1 gene_id:5359|Hs108|chr3 (318 aa) initn: 2326 init1: 2326 opt: 2326 Z-score: 1272.6 bits: 243.7 E(32554): 1.5e-64 Smith-Waterman score: 2326; 100.0% identity (100.0% similar) in 318 aa overlap (1-318:1-318) 10 20 30 40 50 60 pF1KB6 MDKQNSQMNASHPETNLPVGYPPQYPPTAFQGPPGYSGYPGPQVSYPPPPAGHSGPGPAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 MDKQNSQMNASHPETNLPVGYPPQYPPTAFQGPPGYSGYPGPQVSYPPPPAGHSGPGPAG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 FPVPNQPVYNQPVYNQPVGAAGVPWMPAPQPPLNCPPGLEYLSQIDQILIHQQIELLEVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 FPVPNQPVYNQPVYNQPVGAAGVPWMPAPQPPLNCPPGLEYLSQIDQILIHQQIELLEVL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB6 TGFETNNKYEIKNSFGQRVYFAAEDTDCCTRNCCGPSRPFTLRIIDNMGQEVITLERPLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 TGFETNNKYEIKNSFGQRVYFAAEDTDCCTRNCCGPSRPFTLRIIDNMGQEVITLERPLR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB6 CSSCCCPCCLQEIEIQAPPGVPIGYVIQTWHPCLPKFTIQNEKREDVLKISGPCVVCSCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 CSSCCCPCCLQEIEIQAPPGVPIGYVIQTWHPCLPKFTIQNEKREDVLKISGPCVVCSCC 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB6 GDVDFEIKSLDEQCVVGKISKHWTGILREAFTDADNFGIQFPLDLDVKMKAVMIGACFLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 GDVDFEIKSLDEQCVVGKISKHWTGILREAFTDADNFGIQFPLDLDVKMKAVMIGACFLI 250 260 270 280 290 300 310 pF1KB6 DFMFFESTGSQEQKSGVW :::::::::::::::::: CCDS31 DFMFFESTGSQEQKSGVW 310 >>CCDS75029.1 PLSCR2 gene_id:57047|Hs108|chr3 (293 aa) initn: 1578 init1: 1447 opt: 1497 Z-score: 828.5 bits: 161.4 E(32554): 7.9e-40 Smith-Waterman score: 1497; 74.9% identity (83.7% similar) in 283 aa overlap (32-308:10-292) 10 20 30 40 50 pF1KB6 DKQNSQMNASHPETNLPVGYPPQYPPTAFQGPPGYSGYPGPQVSYPPPPAGHSG-----P ::::. :: :... : : : : CCDS75 MKPFQIHLPGPPGHIVYPKHQAGHTGKQADHLGSQAFYP 10 20 30 60 70 80 90 100 110 pF1KB6 G-PAGFPVPNQPVYNQPVYNQPVGAAGVPWMPAPQPPLNCPPGLEYLSQIDQILIHQQIE : . :: . . :: ::: :::::::: ::::::::::::::::.:::::::: CCDS75 GRQHDYLVPPAGTAGIPVQNQPGRPEGVPWMPAPPPPLNCPPGLEYLSQIDMILIHQQIE 40 50 60 70 80 90 120 130 140 150 160 170 pF1KB6 LLEVLTGFETNNKYEIKNSFGQRVYFAAEDTDCCTRNCCGPSRPFTLRIIDNMGQEVITL ::::: .::..: ::::::::::.:::::::. : ::::: :::::::: ::.:.::::: CCDS75 LLEVLFSFESSNMYEIKNSFGQRIYFAAEDTNFCIRNCCGRSRPFTLRITDNVGREVITL 100 110 120 130 140 150 180 190 200 210 220 230 pF1KB6 ERPLRCSSCCCPCCLQEIEIQAPPGVPIGYVIQTWHPCLPKFTIQNEKREDVLKISGPCV ::::::. :::::::::::::::::::.::: ::::::: ::::.:.::::::::::::. CCDS75 ERPLRCNCCCCPCCLQEIEIQAPPGVPVGYVTQTWHPCLTKFTIKNQKREDVLKISGPCI 160 170 180 190 200 210 240 250 260 270 280 290 pF1KB6 VCSCCGDVDFEIKSLDEQCVVGKISKHWTGILREAFTDADNFGIQFPLDLDVKMKAVMIG :::: . ::::: ::::: :::.:::::.:.:::::::::::::::: :::::::::::: CCDS75 VCSCIAGVDFEITSLDEQIVVGRISKHWSGFLREAFTDADNFGIQFPRDLDVKMKAVMIG 220 230 240 250 260 270 300 310 pF1KB6 ACFLIDFMFFESTGSQEQKSGVW ::::::.:::: : CCDS75 ACFLIDYMFFERTR 280 290 >>CCDS56284.1 PLSCR2 gene_id:57047|Hs108|chr3 (297 aa) initn: 1573 init1: 1447 opt: 1489 Z-score: 824.1 bits: 160.6 E(32554): 1.4e-39 Smith-Waterman score: 1489; 74.8% identity (83.7% similar) in 282 aa overlap (33-308:15-296) 10 20 30 40 50 pF1KB6 KQNSQMNASHPETNLPVGYPPQYPPTAFQGPPGYSGYPGPQVSYPPPPAGHSG-----PG :::. :: :... : : : :: CCDS56 MRSWNSLFCLNSSRPPGHIVYPKHQAGHTGKQADHLGSQAFYPG 10 20 30 40 60 70 80 90 100 110 pF1KB6 -PAGFPVPNQPVYNQPVYNQPVGAAGVPWMPAPQPPLNCPPGLEYLSQIDQILIHQQIEL . :: . . :: ::: :::::::: ::::::::::::::::.::::::::: CCDS56 RQHDYLVPPAGTAGIPVQNQPGRPEGVPWMPAPPPPLNCPPGLEYLSQIDMILIHQQIEL 50 60 70 80 90 100 120 130 140 150 160 170 pF1KB6 LEVLTGFETNNKYEIKNSFGQRVYFAAEDTDCCTRNCCGPSRPFTLRIIDNMGQEVITLE :::: .::..: ::::::::::.:::::::. : ::::: :::::::: ::.:.:::::: CCDS56 LEVLFSFESSNMYEIKNSFGQRIYFAAEDTNFCIRNCCGRSRPFTLRITDNVGREVITLE 110 120 130 140 150 160 180 190 200 210 220 230 pF1KB6 RPLRCSSCCCPCCLQEIEIQAPPGVPIGYVIQTWHPCLPKFTIQNEKREDVLKISGPCVV :::::. :::::::::::::::::::.::: ::::::: ::::.:.::::::::::::.: CCDS56 RPLRCNCCCCPCCLQEIEIQAPPGVPVGYVTQTWHPCLTKFTIKNQKREDVLKISGPCIV 170 180 190 200 210 220 240 250 260 270 280 290 pF1KB6 CSCCGDVDFEIKSLDEQCVVGKISKHWTGILREAFTDADNFGIQFPLDLDVKMKAVMIGA ::: . ::::: ::::: :::.:::::.:.:::::::::::::::: ::::::::::::: CCDS56 CSCIAGVDFEITSLDEQIVVGRISKHWSGFLREAFTDADNFGIQFPRDLDVKMKAVMIGA 230 240 250 260 270 280 300 310 pF1KB6 CFLIDFMFFESTGSQEQKSGVW :::::.:::: : CCDS56 CFLIDYMFFERTR 290 >>CCDS3134.1 PLSCR2 gene_id:57047|Hs108|chr3 (224 aa) initn: 1438 init1: 1375 opt: 1375 Z-score: 764.4 bits: 149.1 E(32554): 2.9e-36 Smith-Waterman score: 1375; 84.8% identity (92.8% similar) in 223 aa overlap (86-308:1-223) 60 70 80 90 100 110 pF1KB6 PGPAGFPVPNQPVYNQPVYNQPVGAAGVPWMPAPQPPLNCPPGLEYLSQIDQILIHQQIE :::: ::::::::::::::::.:::::::: CCDS31 MPAPPPPLNCPPGLEYLSQIDMILIHQQIE 10 20 30 120 130 140 150 160 170 pF1KB6 LLEVLTGFETNNKYEIKNSFGQRVYFAAEDTDCCTRNCCGPSRPFTLRIIDNMGQEVITL ::::: .::..: ::::::::::.:::::::. : ::::: :::::::: ::.:.::::: CCDS31 LLEVLFSFESSNMYEIKNSFGQRIYFAAEDTNFCIRNCCGRSRPFTLRITDNVGREVITL 40 50 60 70 80 90 180 190 200 210 220 230 pF1KB6 ERPLRCSSCCCPCCLQEIEIQAPPGVPIGYVIQTWHPCLPKFTIQNEKREDVLKISGPCV ::::::. :::::::::::::::::::.::: ::::::: ::::.:.::::::::::::. CCDS31 ERPLRCNCCCCPCCLQEIEIQAPPGVPVGYVTQTWHPCLTKFTIKNQKREDVLKISGPCI 100 110 120 130 140 150 240 250 260 270 280 290 pF1KB6 VCSCCGDVDFEIKSLDEQCVVGKISKHWTGILREAFTDADNFGIQFPLDLDVKMKAVMIG :::: . ::::: ::::: :::.:::::.:.:::::::::::::::: :::::::::::: CCDS31 VCSCIAGVDFEITSLDEQIVVGRISKHWSGFLREAFTDADNFGIQFPRDLDVKMKAVMIG 160 170 180 190 200 210 300 310 pF1KB6 ACFLIDFMFFESTGSQEQKSGVW ::::::.:::: : CCDS31 ACFLIDYMFFERTR 220 >>CCDS46931.1 PLSCR5 gene_id:389158|Hs108|chr3 (271 aa) initn: 1049 init1: 1025 opt: 1060 Z-score: 594.5 bits: 118.0 E(32554): 8.5e-27 Smith-Waterman score: 1060; 58.9% identity (80.2% similar) in 258 aa overlap (56-308:14-267) 30 40 50 60 70 80 pF1KB6 PPTAFQGPPGYSGYPGPQVSYPPPPAGHSGPG--PAGFPVPNQPVYNQPVYNQPVGAAGV :: : : : :.: . :. ..: . : CCDS46 MASKDAQNQRRGLPGFLP-GAPDPDQSL---PASSNPGNQAWQ 10 20 30 90 100 110 120 130 140 pF1KB6 PWMPAPQ---PPLNCPPGLEYLSQIDQILIHQQIELLEVLTGFETNNKYEIKNSFGQRVY .: :. : .. :::::::::.: :.::::.::: .. : ::.::::::::.:::.: CCDS46 LSLPLPSSFLPTVSLPPGLEYLSQLDLIIIHQQVELLGMILGTETSNKYEIKNSLGQRIY 40 50 60 70 80 90 150 160 170 180 190 200 pF1KB6 FAAEDTDCCTRNCCGPSRPFTLRIIDNMGQEVITLERPLRCSSCCCPCCLQEIEIQAPPG ::.:.. : .:. :. : :::: :: :.::::..:::::.:: ::: :::.::::::: CCDS46 FAVEESICFNRTFCSTLRSCTLRITDNSGREVITVNRPLRCNSCWCPCYLQELEIQAPPG 100 110 120 130 140 150 210 220 230 240 250 260 pF1KB6 VPIGYVIQTWHPCLPKFTIQNEKREDVLKISGPCVVCSCCGDVDFEIKSLDEQCVVGKIS . .::: : : : :::::::: ..::.::: ::::.:.: ::::::.:...:. ..:::: CCDS46 TIVGYVTQKWDPFLPKFTIQNANKEDILKIVGPCVTCGCFGDVDFEVKTINEKLTIGKIS 160 170 180 190 200 210 270 280 290 300 310 pF1KB6 KHWTGILREAFTDADNFGIQFPLDLDVKMKAVMIGACFLIDFMFFESTGSQEQKSGVW :.:.:.. ..::.::::::. : :::: .::.:::::::.:::::: . CCDS46 KYWSGFVNDVFTNADNFGIHVPADLDVTVKAAMIGACFLFDFMFFEHSLAGL 220 230 240 250 260 270 >>CCDS42253.1 PLSCR3 gene_id:57048|Hs108|chr17 (295 aa) initn: 1090 init1: 956 opt: 1038 Z-score: 582.3 bits: 115.8 E(32554): 4.1e-26 Smith-Waterman score: 1038; 51.5% identity (73.6% similar) in 299 aa overlap (20-309:3-286) 10 20 30 40 50 pF1KB6 MDKQNSQMNASHPETNLPVGY-PPQ-YPPTAFQGPPGYSGYPGPQVSYPPPPAGHSGPGP :: ::. : :. :: : :: :: : : : ::: CCDS42 MAGYLPPKGYAPSP---PPPYPVTPG----YPEP-ALHPGPGQ 10 20 30 60 70 80 90 100 110 pF1KB6 AGFPVPNQ---PVYNQPVYNQP----VGAAGVPWMPAPQPPLNCPPGLEYLSQIDQILIH : ::: : :. . .. .: .:.:. :..: : . : :::.: :::::::: CCDS42 A--PVPAQVPAPAPGFALFPSPGPVALGSAA-PFLPLP----GVPSGLEFLVQIDQILIH 40 50 60 70 80 120 130 140 150 160 170 pF1KB6 QQIELLEVLTGFETNNKYEIKNSFGQRVYFAAEDTDCCTRNCCGPSRPFTLRIIDNMGQE :. : .:.. :.:: :.::.... :: . :::...::.: ::: ::. .:. : .: CCDS42 QKAERVETFLGWETCNRYELRSGAGQPLGQAAEESNCCARLCCGARRPLRVRLADPGDRE 90 100 110 120 130 140 180 190 200 210 220 230 pF1KB6 VITLERPLRCSSCCCPCCLQEIEIQAPPGVPIGYVIQTWHPCLPKFTIQNEKREDVLKIS :. : :::.:. :::: :::.:.:::::. ::.:.::::: ::::.::. :. ::.. CCDS42 VLRLLRPLHCGCSCCPCGLQEMEVQAPPGTTIGHVLQTWHPFLPKFSIQDADRQTVLRVV 150 160 170 180 190 200 240 250 260 270 280 290 pF1KB6 GPCVVCSCCGDVDFEIKSLDEQCVVGKISKHWTGILREAFTDADNFGIQFPLDLDVKMKA ::: .:.: :..::.:. ::. ::.:::.: :..:::.::::.::.::::::::..:: CCDS42 GPCWTCGCGTDTNFEVKTRDESRSVGRISKQWGGLVREALTDADDFGLQFPLDLDVRVKA 210 220 230 240 250 260 300 310 pF1KB6 VMIGACFLIDFMFFESTGSQEQKSGVW :..:: ::::.::::. : CCDS42 VLLGATFLIDYMFFEKRGGAGPSAVTS 270 280 290 >>CCDS3133.1 PLSCR4 gene_id:57088|Hs108|chr3 (329 aa) initn: 716 init1: 430 opt: 1010 Z-score: 566.8 bits: 113.1 E(32554): 3e-25 Smith-Waterman score: 1013; 48.6% identity (71.2% similar) in 313 aa overlap (22-314:22-329) 10 20 30 40 50 pF1KB6 MDKQNSQMNASHPETNLPVGYPPQYPPTAFQGPPGYSGY--PGPQVSYPPPPAGHSGPGP ::. : : :: :... ::: . :::.:. : : CCDS31 MSGVVPTAPEQPAGEMENQTKPPDPRPDA---PPEYNSHFLPGPPGTAVPPPTGYPGGLP 10 20 30 40 50 60 70 80 90 100 pF1KB6 AGFPVPNQP----VYN-----QPVYNQP----VGAAGVP--WMPAPQPPLNCPPGLEYLS :. :.:: .:. .:: :: . .:: :::.: : ::::::::: CCDS31 MGYYSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLV 60 70 80 90 100 110 110 120 130 140 150 160 pF1KB6 QIDQILIHQQIELLEVLTGFETNNKYEIKNSFGQRVYFAAEDTDCCTRNCCGPSRPFTLR :.:.: . :..: ::..: :::::.:.:::. : ::...:::: ::: :::.:: CCDS31 QLDNIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTEDTDDFTRNAYRTLRPFVLR 120 130 140 150 160 170 170 180 190 200 210 220 pF1KB6 IIDNMGQEVITLERPLRCSSCCCPCC---LQEIEIQAPPGVPIGYVIQTWHPCLPKFTIQ . : ::.:..:..::.::. ::: :: ::.:.: :::: ::.: . :. : ..:: CCDS31 VTDCMGREIMTMQRPFRCT-CCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQ 180 190 200 210 220 230 230 240 250 260 270 280 pF1KB6 NEKREDVLKISGPCVVCSCCGDVDFEIKSLDEQCVVGKISKHWTGILREAFTDADNFGIQ :::.:.:... ::: . .: .: ::.:::: .:.: ..:.:.: :..:::.: :. CCDS31 NEKKENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLS-AMADADHFDIH 240 250 260 270 280 290 290 300 310 pF1KB6 FPLDLDVKMKAVMIGACFLIDFMFFESTGSQEQKSGVW :::::::::::...:::::::::.:: . :... CCDS31 FPLDLDVKMKAMIFGACFLIDFMYFERSPPQRSR 300 310 320 >>CCDS82853.1 PLSCR5 gene_id:389158|Hs108|chr3 (259 aa) initn: 967 init1: 946 opt: 988 Z-score: 556.2 bits: 110.8 E(32554): 1.2e-24 Smith-Waterman score: 988; 57.1% identity (78.6% similar) in 252 aa overlap (57-308:12-255) 30 40 50 60 70 80 pF1KB6 PTAFQGPPGYSGYPGPQVSYPPPPAGHSGPGPAGFPVPNQPVYNQPVYNQPVGAAGVPWM : :: .:. : .: .: . :.. : CCDS82 MASKDAQNQRRGLPGF-LPGAP---DP--DQSLPASSNPGN 10 20 30 90 100 110 120 130 140 pF1KB6 PAPQPPLNCPPGLEYLSQIDQILIHQQIELLEVLTGFETNNKYEIKNSFGQRVYFAAEDT : : : : . .: .: :.::::.::: .. : ::.::::::::.:::.:::.:.. CCDS82 QAWQLSLPLPSS--FLPTLDLIIIHQQVELLGMILGTETSNKYEIKNSLGQRIYFAVEES 40 50 60 70 80 90 150 160 170 180 190 200 pF1KB6 DCCTRNCCGPSRPFTLRIIDNMGQEVITLERPLRCSSCCCPCCLQEIEIQAPPGVPIGYV : .:. :. : :::: :: :.::::..:::::.:: ::: :::.:::::::. .::: CCDS82 ICFNRTFCSTLRSCTLRITDNSGREVITVNRPLRCNSCWCPCYLQELEIQAPPGTIVGYV 100 110 120 130 140 150 210 220 230 240 250 260 pF1KB6 IQTWHPCLPKFTIQNEKREDVLKISGPCVVCSCCGDVDFEIKSLDEQCVVGKISKHWTGI : : : :::::::: ..::.::: ::::.:.: ::::::.:...:. ..:::::.:.:. CCDS82 TQKWDPFLPKFTIQNANKEDILKIVGPCVTCGCFGDVDFEVKTINEKLTIGKISKYWSGF 160 170 180 190 200 210 270 280 290 300 310 pF1KB6 LREAFTDADNFGIQFPLDLDVKMKAVMIGACFLIDFMFFESTGSQEQKSGVW . ..::.::::::. : :::: .::.:::::::.:::::: . CCDS82 VNDVFTNADNFGIHVPADLDVTVKAAMIGACFLFDFMFFEHSLAGL 220 230 240 250 318 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 00:03:47 2016 done: Mon Nov 7 00:03:48 2016 Total Scan time: 3.030 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]