FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6325, 435 aa 1>>>pF1KE6325 435 - 435 aa - 435 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.0124+/-0.00113; mu= 9.4022+/- 0.067 mean_var=114.0238+/-23.032, 0's: 0 Z-trim(105.4): 43 B-trim: 87 in 2/50 Lambda= 0.120109 statistics sampled from 8370 (8385) to 8370 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.62), E-opt: 0.2 (0.258), width: 16 Scan time: 2.660 The best scores are: opt bits E(32554) CCDS44950.1 RASSF9 gene_id:9182|Hs108|chr12 ( 435) 2841 503.6 1.6e-142 >>CCDS44950.1 RASSF9 gene_id:9182|Hs108|chr12 (435 aa) initn: 2841 init1: 2841 opt: 2841 Z-score: 2672.4 bits: 503.6 E(32554): 1.6e-142 Smith-Waterman score: 2841; 100.0% identity (100.0% similar) in 435 aa overlap (1-435:1-435) 10 20 30 40 50 60 pF1KE6 MAPFGRNLLKTRHKNRSPTKDMDSEEKEIVVWVCQEEKLVCGLTKRTTSADVIQALLEEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 MAPFGRNLLKTRHKNRSPTKDMDSEEKEIVVWVCQEEKLVCGLTKRTTSADVIQALLEEH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 EATFGEKRFLLGKPSDYCIIEKWRGSERVLPPLTRILKLWKAWGDEQPNMQFVLVKADAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 EATFGEKRFLLGKPSDYCIIEKWRGSERVLPPLTRILKLWKAWGDEQPNMQFVLVKADAF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 LPVPLWRTAEAKLVQNTEKLWELSPANYMKTLPPDKQKRIVRKTFRKLAKIKQDTVSHDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 LPVPLWRTAEAKLVQNTEKLWELSPANYMKTLPPDKQKRIVRKTFRKLAKIKQDTVSHDR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 DNMETLVHLIISQDHTIHQQVKRMKELDLEIEKCEAKFHLDRVENDGENYVQDAYLMPSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 DNMETLVHLIISQDHTIHQQVKRMKELDLEIEKCEAKFHLDRVENDGENYVQDAYLMPSF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 SEVEQNLDLQYEENQTLEDLSESDGIEQLEERLKYYRILIDKLSAEIEKEVKSVCIDINE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 SEVEQNLDLQYEENQTLEDLSESDGIEQLEERLKYYRILIDKLSAEIEKEVKSVCIDINE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 DAEGEAASELESSNLESVKCDLEKSMKAGLKIHSHLSGIQKEIKYSDSLLQMKAKEYELL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 DAEGEAASELESSNLESVKCDLEKSMKAGLKIHSHLSGIQKEIKYSDSLLQMKAKEYELL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 AKEFNSLHISNKDGCQLKENRAKESEVPSSNGEIPPFTQRVFSNYTNDTDSDTGISSNHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 AKEFNSLHISNKDGCQLKENRAKESEVPSSNGEIPPFTQRVFSNYTNDTDSDTGISSNHS 370 380 390 400 410 420 430 pF1KE6 QDSETTVGDVVLLST ::::::::::::::: CCDS44 QDSETTVGDVVLLST 430 435 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 12:07:19 2016 done: Tue Nov 8 12:07:20 2016 Total Scan time: 2.660 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]