FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3591, 423 aa 1>>>pF1KE3591 423 - 423 aa - 423 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.0214+/-0.000426; mu= 13.2740+/- 0.026 mean_var=88.4584+/-18.918, 0's: 0 Z-trim(111.9): 139 B-trim: 675 in 1/52 Lambda= 0.136366 statistics sampled from 20436 (20601) to 20436 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.6), E-opt: 0.2 (0.242), width: 16 Scan time: 8.980 The best scores are: opt bits E(85289) NP_036289 (OMIM: 605652) F-box/LRR-repeat protein ( 423) 2874 576.0 6.3e-164 NP_116264 (OMIM: 609086) F-box/LRR-repeat protein ( 436) 2372 477.2 3.5e-134 XP_005257803 (OMIM: 609086) PREDICTED: F-box/LRR-r ( 473) 2372 477.2 3.7e-134 XP_005265071 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 454) 2209 445.2 1.6e-124 XP_005265074 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 318) 2071 417.9 1.8e-116 XP_016861583 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 318) 2071 417.9 1.8e-116 NP_001171835 (OMIM: 609086) F-box/LRR-repeat prote ( 404) 1548 315.1 2.1e-85 XP_005257804 (OMIM: 609086) PREDICTED: F-box/LRR-r ( 441) 1548 315.1 2.2e-85 NP_001165184 (OMIM: 605652) F-box/LRR-repeat prote ( 355) 1537 312.9 8.3e-85 XP_016861581 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 349) 1406 287.1 4.7e-77 XP_016861582 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 349) 1406 287.1 4.7e-77 XP_005265072 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 349) 1406 287.1 4.7e-77 XP_011531861 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 349) 1406 287.1 4.7e-77 XP_005265073 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 349) 1406 287.1 4.7e-77 XP_011514234 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 639) 585 125.8 3.2e-28 XP_011512300 (OMIM: 605656) PREDICTED: F-box/LRR-r ( 444) 527 114.2 6.5e-25 NP_001265246 (OMIM: 605656) F-box/LRR-repeat prote ( 444) 527 114.2 6.5e-25 XP_016864751 (OMIM: 605656) PREDICTED: F-box/LRR-r ( 486) 527 114.3 7e-25 NP_036436 (OMIM: 605656) F-box/LRR-repeat protein ( 491) 527 114.3 7.1e-25 XP_006715961 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 584) 468 102.7 2.5e-21 XP_016867342 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 735) 468 102.8 3.1e-21 XP_011514232 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 735) 468 102.8 3.1e-21 XP_005250266 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 735) 468 102.8 3.1e-21 NP_659469 (OMIM: 609080) F-box/LRR-repeat protein ( 735) 468 102.8 3.1e-21 XP_016867341 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 780) 468 102.8 3.2e-21 XP_005250264 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 792) 468 102.8 3.3e-21 XP_016867339 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 822) 468 102.8 3.4e-21 XP_005250262 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 825) 468 102.8 3.4e-21 XP_011514231 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 783) 462 101.6 7.3e-21 XP_016867340 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 809) 462 101.6 7.5e-21 XP_016866217 (OMIM: 605654,615471) PREDICTED: F-bo ( 379) 378 84.9 3.8e-16 NP_001265645 (OMIM: 605654,615471) F-box/LRR-repea ( 621) 378 85.0 5.7e-16 NP_036292 (OMIM: 605654,615471) F-box/LRR-repeat p ( 621) 378 85.0 5.7e-16 XP_016866215 (OMIM: 605654,615471) PREDICTED: F-bo ( 621) 378 85.0 5.7e-16 NP_001274079 (OMIM: 609080) F-box/LRR-repeat prote ( 707) 352 79.9 2.2e-14 NP_699181 (OMIM: 609082) F-box/LRR-repeat protein ( 479) 349 79.2 2.4e-14 XP_011514230 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 797) 352 80.0 2.4e-14 XP_016874365 (OMIM: 609081) PREDICTED: F-box/LRR-r ( 387) 341 77.6 6e-14 XP_016874364 (OMIM: 609081) PREDICTED: F-box/LRR-r ( 404) 341 77.6 6.2e-14 NP_689654 (OMIM: 609081) F-box/LRR-repeat protein ( 418) 341 77.6 6.4e-14 NP_001156787 (OMIM: 609083) F-box/LRR-repeat prote ( 701) 340 77.6 1.1e-13 XP_005272105 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 712) 340 77.6 1.1e-13 XP_011541876 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 621) 329 75.4 4.6e-13 XP_011541877 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 618) 326 74.8 6.8e-13 XP_011541880 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 582) 317 73.0 2.2e-12 XP_011541879 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 589) 317 73.0 2.2e-12 XP_011541878 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 610) 317 73.0 2.3e-12 XP_016865218 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 567) 273 64.3 8.8e-10 XP_005272107 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 505) 221 54.1 9.6e-07 XP_011541881 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 513) 221 54.1 9.7e-07 >>NP_036289 (OMIM: 605652) F-box/LRR-repeat protein 2 is (423 aa) initn: 2874 init1: 2874 opt: 2874 Z-score: 3064.0 bits: 576.0 E(85289): 6.3e-164 Smith-Waterman score: 2874; 100.0% identity (100.0% similar) in 423 aa overlap (1-423:1-423) 10 20 30 40 50 60 pF1KE3 MVFSNNDEGLINKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLFNF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 MVFSNNDEGLINKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLFNF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 QTDVEGRVVENISKRCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 QTDVEGRVVENISKRCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 TCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 TCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 CRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 CRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALC 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 LSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLLARNCHELEKMDLEECILIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 LSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLLARNCHELEKMDLEECILIT 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 DSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCGHERLRVLELDNCLLITDVALE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 DSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCGHERLRVLELDNCLLITDVALE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 HLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYFAPVTPPTAVAGSGQRLCRCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 HLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYFAPVTPPTAVAGSGQRLCRCC 370 380 390 400 410 420 pF1KE3 VIL ::: NP_036 VIL >>NP_116264 (OMIM: 609086) F-box/LRR-repeat protein 20 i (436 aa) initn: 2372 init1: 2372 opt: 2372 Z-score: 2530.1 bits: 477.2 E(85289): 3.5e-134 Smith-Waterman score: 2372; 78.2% identity (94.5% similar) in 422 aa overlap (2-423:15-436) 10 20 30 40 pF1KE3 MVFSNNDEGLINKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILAL .:::.::..::::::::::::::::::.::::::::.:.:::.::: NP_116 MRRDVNGVTKSRFEMFSNSDEAVINKKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLAL 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE3 DGSNWQRIDLFNFQTDVEGRVVENISKRCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIE :::::::::::.:: :.::::::::::::::::::::::::.::::..:.:::::::::: NP_116 DGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIE 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE3 HLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCD :::::::: ::.:: :::.:::::.::::.::.:::: :::..:::: :: ::.:::: NP_116 VLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCD 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE3 QITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVV :.:::::.:::::: :::::.:.:::::::::::.: .: :::.::::.: .:::::.. NP_116 QVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLI 190 200 210 220 230 240 230 240 250 260 270 280 pF1KE3 QICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLLARNCHE ::::::.::.:: :::::.::: :.::: :::::.:::.::::.:::.::: ::::::: NP_116 TICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHE 250 260 270 280 290 300 290 300 310 320 330 340 pF1KE3 LEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCGHERLRVLE :::::::::. ::::::::::::::.::.:::::::::::::: ::.:..:.:..:.:.: NP_116 LEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIE 310 320 330 340 350 360 350 360 370 380 390 400 pF1KE3 LDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYFAPVTPPT :::: ::::..::::..:..:::.:::::::.:::::::.:..::..:::::::::::: NP_116 LDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTPPP 370 380 390 400 410 420 410 420 pF1KE3 AVAGSGQRLCRCCVIL .:.:: ::.::::.:: NP_116 SVGGSRQRFCRCCIIL 430 >>XP_005257803 (OMIM: 609086) PREDICTED: F-box/LRR-repea (473 aa) initn: 2372 init1: 2372 opt: 2372 Z-score: 2529.5 bits: 477.2 E(85289): 3.7e-134 Smith-Waterman score: 2372; 78.2% identity (94.5% similar) in 422 aa overlap (2-423:52-473) 10 20 30 pF1KE3 MVFSNNDEGLINKKLPKELLLRIFSFLDIVT .:::.::..::::::::::::::::::.:: XP_005 AALPQSRHIQKRRKMAPSRDRLLHFGFKATMFSNSDEAVINKKLPKELLLRIFSFLDVVT 30 40 50 60 70 80 40 50 60 70 80 90 pF1KE3 LCRCAQISKAWNILALDGSNWQRIDLFNFQTDVEGRVVENISKRCGGFLRKLSLRGCIGV ::::::.:.:::.::::::::::::::.:: :.::::::::::::::::::::::::.:: XP_005 LCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGV 90 100 110 120 130 140 100 110 120 130 140 150 pF1KE3 GDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGI ::..:.:::::::::: :::::::: ::.:: :::.:::::.::::.::.:::: :::.. XP_005 GDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKAL 150 160 170 180 190 200 160 170 180 190 200 210 pF1KE3 SEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHELV :::: :: ::.:::::.:::::.:::::: :::::.:.:::::::::::.: .: ::: XP_005 SEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELV 210 220 230 240 250 260 220 230 240 250 260 270 pF1KE3 SLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCS .::::.: .:::::.. ::::::.::.:: :::::.::: :.::: :::::.:::.:::: XP_005 TLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCS 270 280 290 300 310 320 280 290 300 310 320 330 pF1KE3 HLTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGIL .:::.::: ::::::::::::::::. ::::::::::::::.::.:::::::::::::: XP_005 QLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIR 330 340 350 360 370 380 340 350 360 370 380 390 pF1KE3 HLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQL ::.:..:.:..:.:.::::: ::::..::::..:..:::.:::::::.:::::::.:..: XP_005 HLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHL 390 400 410 420 430 440 400 410 420 pF1KE3 PHVKVHAYFAPVTPPTAVAGSGQRLCRCCVIL :..:::::::::::: .:.:: ::.::::.:: XP_005 PNIKVHAYFAPVTPPPSVGGSRQRFCRCCIIL 450 460 470 >>XP_005265071 (OMIM: 605652) PREDICTED: F-box/LRR-repea (454 aa) initn: 2860 init1: 2145 opt: 2209 Z-score: 2356.5 bits: 445.2 E(85289): 1.6e-124 Smith-Waterman score: 2802; 93.2% identity (93.2% similar) in 454 aa overlap (1-423:1-454) 10 20 30 40 50 60 pF1KE3 MVFSNNDEGLINKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLFNF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MVFSNNDEGLINKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLFNF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 QTDVEGRVVENISKRCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 QTDVEGRVVENISKRCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 TCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 TCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 CRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 CRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALC 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 LSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLLARNCHELEKMDLEECILIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLLARNCHELEKMDLEECILIT 250 260 270 280 290 300 310 320 pF1KE3 DSTLIQLSIHCPKLQAL-------------------------------SLSHCELITDDG ::::::::::::::::: :::::::::::: XP_005 DSTLIQLSIHCPKLQALVSLSFSDIIHLLKMKEPSHHNKKLFGFSFCKSLSHCELITDDG 310 320 330 340 350 360 330 340 350 360 370 380 pF1KE3 ILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 ILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRA 370 380 390 400 410 420 390 400 410 420 pF1KE3 QLPHVKVHAYFAPVTPPTAVAGSGQRLCRCCVIL :::::::::::::::::::::::::::::::::: XP_005 QLPHVKVHAYFAPVTPPTAVAGSGQRLCRCCVIL 430 440 450 >>XP_005265074 (OMIM: 605652) PREDICTED: F-box/LRR-repea (318 aa) initn: 2071 init1: 2071 opt: 2071 Z-score: 2212.0 bits: 417.9 E(85289): 1.8e-116 Smith-Waterman score: 2071; 100.0% identity (100.0% similar) in 304 aa overlap (120-423:15-318) 90 100 110 120 130 140 pF1KE3 GVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLK :::::::::::::::::::::::::::::: XP_005 MDAQKSLTVRLLFFSTCYSLSRFCSKLKHLDLTSCVSITNSSLK 10 20 30 40 150 160 170 180 190 200 pF1KE3 GISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 GISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHE 50 60 70 80 90 100 210 220 230 240 250 260 pF1KE3 LVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAAR 110 120 130 140 150 160 270 280 290 300 310 320 pF1KE3 CSHLTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 CSHLTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDG 170 180 190 200 210 220 330 340 350 360 370 380 pF1KE3 ILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 ILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRA 230 240 250 260 270 280 390 400 410 420 pF1KE3 QLPHVKVHAYFAPVTPPTAVAGSGQRLCRCCVIL :::::::::::::::::::::::::::::::::: XP_005 QLPHVKVHAYFAPVTPPTAVAGSGQRLCRCCVIL 290 300 310 >>XP_016861583 (OMIM: 605652) PREDICTED: F-box/LRR-repea (318 aa) initn: 2071 init1: 2071 opt: 2071 Z-score: 2212.0 bits: 417.9 E(85289): 1.8e-116 Smith-Waterman score: 2071; 100.0% identity (100.0% similar) in 304 aa overlap (120-423:15-318) 90 100 110 120 130 140 pF1KE3 GVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLK :::::::::::::::::::::::::::::: XP_016 MDAQKSLTVRLLFFSTCYSLSRFCSKLKHLDLTSCVSITNSSLK 10 20 30 40 150 160 170 180 190 200 pF1KE3 GISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHE 50 60 70 80 90 100 210 220 230 240 250 260 pF1KE3 LVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAAR 110 120 130 140 150 160 270 280 290 300 310 320 pF1KE3 CSHLTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 CSHLTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDG 170 180 190 200 210 220 330 340 350 360 370 380 pF1KE3 ILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRA 230 240 250 260 270 280 390 400 410 420 pF1KE3 QLPHVKVHAYFAPVTPPTAVAGSGQRLCRCCVIL :::::::::::::::::::::::::::::::::: XP_016 QLPHVKVHAYFAPVTPPTAVAGSGQRLCRCCVIL 290 300 310 >>NP_001171835 (OMIM: 609086) F-box/LRR-repeat protein 2 (404 aa) initn: 2195 init1: 1487 opt: 1548 Z-score: 1654.4 bits: 315.1 E(85289): 2.1e-85 Smith-Waterman score: 2135; 72.5% identity (87.4% similar) in 422 aa overlap (2-423:15-404) 10 20 30 40 pF1KE3 MVFSNNDEGLINKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILAL .:::.::..::::::::::::::::::.::::::::.:.:::.::: NP_001 MRRDVNGVTKSRFEMFSNSDEAVINKKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLAL 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE3 DGSNWQRIDLFNFQTDVEGRVVENISKRCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIE :::::::::::.:: :.::::::::::::::::::::::::.::::..:.:::::::::: NP_001 DGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIE 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE3 HLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCD :::::::: ::. ::: :: ::.:::: NP_001 VLNLNGCTKTTDA--------------------------------EGCPLLEQLNISWCD 130 140 170 180 190 200 210 220 pF1KE3 QITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVV :.:::::.:::::: :::::.:.:::::::::::.: .: :::.::::.: .:::::.. NP_001 QVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLI 150 160 170 180 190 200 230 240 250 260 270 280 pF1KE3 QICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLLARNCHE ::::::.::.:: :::::.::: :.::: :::::.:::.::::.:::.::: ::::::: NP_001 TICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHE 210 220 230 240 250 260 290 300 310 320 330 340 pF1KE3 LEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCGHERLRVLE :::::::::. ::::::::::::::.::.:::::::::::::: ::.:..:.:..:.:.: NP_001 LEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIE 270 280 290 300 310 320 350 360 370 380 390 400 pF1KE3 LDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYFAPVTPPT :::: ::::..::::..:..:::.:::::::.:::::::.:..::..:::::::::::: NP_001 LDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTPPP 330 340 350 360 370 380 410 420 pF1KE3 AVAGSGQRLCRCCVIL .:.:: ::.::::.:: NP_001 SVGGSRQRFCRCCIIL 390 400 >>XP_005257804 (OMIM: 609086) PREDICTED: F-box/LRR-repea (441 aa) initn: 2195 init1: 1487 opt: 1548 Z-score: 1653.9 bits: 315.1 E(85289): 2.2e-85 Smith-Waterman score: 2135; 72.5% identity (87.4% similar) in 422 aa overlap (2-423:52-441) 10 20 30 pF1KE3 MVFSNNDEGLINKKLPKELLLRIFSFLDIVT .:::.::..::::::::::::::::::.:: XP_005 AALPQSRHIQKRRKMAPSRDRLLHFGFKATMFSNSDEAVINKKLPKELLLRIFSFLDVVT 30 40 50 60 70 80 40 50 60 70 80 90 pF1KE3 LCRCAQISKAWNILALDGSNWQRIDLFNFQTDVEGRVVENISKRCGGFLRKLSLRGCIGV ::::::.:.:::.::::::::::::::.:: :.::::::::::::::::::::::::.:: XP_005 LCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGV 90 100 110 120 130 140 100 110 120 130 140 150 pF1KE3 GDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGI ::..:.:::::::::: :::::::: ::. XP_005 GDNALRTFAQNCRNIEVLNLNGCTKTTDA------------------------------- 150 160 170 160 170 180 190 200 210 pF1KE3 SEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHELV ::: :: ::.:::::.:::::.:::::: :::::.:.:::::::::::.: .: ::: XP_005 -EGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELV 180 190 200 210 220 220 230 240 250 260 270 pF1KE3 SLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCS .::::.: .:::::.. ::::::.::.:: :::::.::: :.::: :::::.:::.:::: XP_005 TLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCS 230 240 250 260 270 280 280 290 300 310 320 330 pF1KE3 HLTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGIL .:::.::: ::::::::::::::::. ::::::::::::::.::.:::::::::::::: XP_005 QLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIR 290 300 310 320 330 340 340 350 360 370 380 390 pF1KE3 HLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQL ::.:..:.:..:.:.::::: ::::..::::..:..:::.:::::::.:::::::.:..: XP_005 HLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHL 350 360 370 380 390 400 400 410 420 pF1KE3 PHVKVHAYFAPVTPPTAVAGSGQRLCRCCVIL :..:::::::::::: .:.:: ::.::::.:: XP_005 PNIKVHAYFAPVTPPPSVGGSRQRFCRCCIIL 410 420 430 440 >>NP_001165184 (OMIM: 605652) F-box/LRR-repeat protein 2 (355 aa) initn: 1531 init1: 1531 opt: 1537 Z-score: 1643.6 bits: 312.9 E(85289): 8.3e-85 Smith-Waterman score: 2273; 83.9% identity (83.9% similar) in 423 aa overlap (1-423:1-355) 10 20 30 40 50 60 pF1KE3 MVFSNNDEGLINKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLFNF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MVFSNNDEGLINKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLFNF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 QTDVEGRVVENISKRCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QTDVEGRVVENISKRCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 TCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRG :::::::::::::: NP_001 TCYSLSRFCSKLKH---------------------------------------------- 130 190 200 210 220 230 240 pF1KE3 CRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALC :::::::::::::::::::::::::::::::::::::: NP_001 ----------------------IQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALC 140 150 160 170 250 260 270 280 290 300 pF1KE3 LSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLLARNCHELEKMDLEECILIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLLARNCHELEKMDLEECILIT 180 190 200 210 220 230 310 320 330 340 350 360 pF1KE3 DSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCGHERLRVLELDNCLLITDVALE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCGHERLRVLELDNCLLITDVALE 240 250 260 270 280 290 370 380 390 400 410 420 pF1KE3 HLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYFAPVTPPTAVAGSGQRLCRCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 HLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYFAPVTPPTAVAGSGQRLCRCC 300 310 320 330 340 350 pF1KE3 VIL ::: NP_001 VIL >>XP_016861581 (OMIM: 605652) PREDICTED: F-box/LRR-repea (349 aa) initn: 2057 init1: 1342 opt: 1406 Z-score: 1504.4 bits: 287.1 E(85289): 4.7e-77 Smith-Waterman score: 1999; 90.7% identity (90.7% similar) in 335 aa overlap (120-423:15-349) 90 100 110 120 130 140 pF1KE3 GVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLK :::::::::::::::::::::::::::::: XP_016 MDAQKSLTVRLLFFSTCYSLSRFCSKLKHLDLTSCVSITNSSLK 10 20 30 40 150 160 170 180 190 200 pF1KE3 GISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHE 50 60 70 80 90 100 210 220 230 240 250 260 pF1KE3 LVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAAR 110 120 130 140 150 160 270 280 290 300 310 pF1KE3 CSHLTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQAL------------ :::::::::::::::::::::::::::::::::::::::::::::::: XP_016 CSHLTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALVSLSFSDIIHLL 170 180 190 200 210 220 320 330 340 350 pF1KE3 -------------------SLSHCELITDDGILHLSNSTCGHERLRVLELDNCLLITDVA ::::::::::::::::::::::::::::::::::::::::: XP_016 KMKEPSHHNKKLFGFSFCKSLSHCELITDDGILHLSNSTCGHERLRVLELDNCLLITDVA 230 240 250 260 270 280 360 370 380 390 400 410 pF1KE3 LEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYFAPVTPPTAVAGSGQRLCR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYFAPVTPPTAVAGSGQRLCR 290 300 310 320 330 340 420 pF1KE3 CCVIL ::::: XP_016 CCVIL 423 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 00:09:15 2016 done: Mon Nov 7 00:09:17 2016 Total Scan time: 8.980 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]