FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9666, 1186 aa 1>>>pF1KE9666 1186 - 1186 aa - 1186 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.3623+/-0.00107; mu= 8.3821+/- 0.064 mean_var=152.8671+/-31.022, 0's: 0 Z-trim(108.4): 25 B-trim: 97 in 2/49 Lambda= 0.103733 statistics sampled from 10154 (10167) to 10154 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.657), E-opt: 0.2 (0.312), width: 16 Scan time: 5.400 The best scores are: opt bits E(32554) CCDS32004.1 ERCC5 gene_id:2073|Hs108|chr13 (1186) 7686 1163.1 0 >>CCDS32004.1 ERCC5 gene_id:2073|Hs108|chr13 (1186 aa) initn: 7686 init1: 7686 opt: 7686 Z-score: 6220.9 bits: 1163.1 E(32554): 0 Smith-Waterman score: 7686; 99.8% identity (99.8% similar) in 1186 aa overlap (1-1186:1-1186) 10 20 30 40 50 60 pF1KE9 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENPHLLTLFH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENPHLLTLFH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 RLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTEKLLKTFLKRQAIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 RLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTEKLLKTFLKRQAIK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 TAFRSKRDEALPSLTQVRRENDLYVLPPLQEEEKHSSEEEDEKEWQERMNQKQALQEEFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 TAFRSKRDEALPSLTQVRRENDLYVLPPLQEEEKHSSEEEDEKEWQERMNQKQALQEEFF 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 HNPQAIDIESEDFSSLPPEVKHEILTDMKEFTKRRRTLFEAMPEESDDFSQYQLKGLLKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 HNPQAIDIESEDFSSLPPEVKHEILTDMKEFTKRRRTLFEAMPEESDDFSQYQLKGLLKK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE9 NYLNQHIEHVQKEMNQQHSGHIRRQYEDEGGFLKEVESRRVVSEDTSHYILIKGIQAKTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 NYLNQHIEHVQKEMNQQHSGHIRRQYEDEGGFLKEVESRRVVSEDTSHYILIKGIQAKTV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE9 AEVDSESLPSSSKMHGMSFDVKSSPCEKLKTEKEPDATPPSPRTLLAMQAALLGSSSEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 AEVDSESLPSSSKMHGMSFDVKSSPCEKLKTEKEPDATPPSPRTLLAMQAALLGSSSEEE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE9 LESENRRQARGRNAPAAVDEGSISPRTLSAIKRALDDDEDVKVCAGDDVQTGGPGAEEMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 LESENRRQARGRNAPAAVDEGSISPRTLSAIKRALDDDEDVKVCAGDDVQTGGPGAEEMR 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE9 INSSTENSDEGLKVRDGKGIPFTATLASSSVNSAEEHVASTNEGREPTDSVPKEQMSLVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 INSSTENSDEGLKVRDGKGIPFTATLASSSVNSAEEHVASTNEGREPTDSVPKEQMSLVH 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE9 VGTEAFPISDESMIKDRKDRLPLESAVVRHSDAPGLPNGRELTPASPTCTNSVSKNETHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 VGTEAFPISDESMIKDRKDRLPLESAVVRHSDAPGLPNGRELTPASPTCTNSVSKNETHA 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE9 EVLEQQNELCPYESKFDSSLLSSDDETKCKPNSASEVIGPVSLQETSSIVSVPSEAVDNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 EVLEQQNELCPYESKFDSSLLSSDDETKCKPNSASEVIGPVSLQETSSIVSVPSEAVDNV 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE9 ENVVSFNAKEHENFLETIQEQQTTESAGQDLISIPKAVEPMEIDSEESESDGSFIEVQSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 ENVVSFNAKEHENFLETIQEQQTTESAGQDLISIPKAVEPMEIDSEESESDGSFIEVQSV 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE9 ISDEELQAEFPETSKPPSEQGEEELVGTREGEAPAESESLLRDNSERDDVDGEPQEAEKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 ISDEELQAEFPETSKPPSEQGEEELVGTREGEAPAESESLLRDNSERDDVDGEPQEAEKD 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE9 AEDSLHEWQDINLEELETLESNLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 AEDSLHEWQDINLEELETLESNLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFG 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE9 IPYIQAPMEAEAQCAILDLTDQTSGTITDDSDIWLFGARHVYRNFFNKNKFVEYYQYVDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 IPYIQAPMEAEAQCAILDLTDQTSGTITDDSDIWLFGARHVYRNFFNKNKFVEYYQYVDF 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE9 HNQLGLDRNKLINLAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEWWHEAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 HNQLGLDRNKLINLAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEWWHEAQ 850 860 870 880 890 900 910 920 930 940 950 960 pF1KE9 KNPKIRPNPHDTKVKKKLRTLQLTPGFPNPAVAEAYLKPVVDDSKGSFLWGKPDLDKIRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 KNPKIRPNPHDTKVKKKLRTLQLTPGFPNPAVAEAYLKPVVDDSKGSFLWGKPDLDKIRE 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KE9 FCQRYFGWNRTKTDESLFPVLKQLDAQQTQLRIDSFFRLAQQEKEDAKRIKSQRLNRAVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 FCQRYFGWNRTKTDESLFPVLKQLDAQQTQLRIDSFFRLAQQEKEDAKRIKSQRLNRAVT 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 pF1KE9 CMLRKEKEAAASEIEAVSVAMEKEFELLDKAKRKTQKRGITNTLEESSSLKRKRLSDSKR :::::::::::::::::::::::::::::::: :::::::::::::::::::::::::: CCDS32 CMLRKEKEAAASEIEAVSVAMEKEFELLDKAKGKTQKRGITNTLEESSSLKRKRLSDSKG 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 pF1KE9 KNTCGGFLGETCLSESSDGSSSEDAESSSLMNVQRRTAAKEPKTSASDSQNSVKEAPVKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 KNTCGGFLGETCLSESSDGSSSEDAESSSLMNVQRRTAAKEPKTSASDSQNSVKEAPVKN 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 pF1KE9 GGATTSSSSDSDDDGGKEKMVLVTARSVFGKKRRKLRRARGRKRKT :::::::::::::::::::::::::::::::::::::::::::::: CCDS32 GGATTSSSSDSDDDGGKEKMVLVTARSVFGKKRRKLRRARGRKRKT 1150 1160 1170 1180 1186 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 00:10:00 2016 done: Mon Nov 7 00:10:01 2016 Total Scan time: 5.400 Total Display time: 0.070 Function used was FASTA [36.3.4 Apr, 2011]