FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3914, 227 aa 1>>>pF1KE3914 227 - 227 aa - 227 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.5819+/-0.000287; mu= 4.1960+/- 0.018 mean_var=133.1681+/-26.867, 0's: 0 Z-trim(122.5): 21 B-trim: 447 in 1/56 Lambda= 0.111141 statistics sampled from 40766 (40787) to 40766 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.811), E-opt: 0.2 (0.478), width: 16 Scan time: 7.360 The best scores are: opt bits E(85289) NP_068762 (OMIM: 607455) AN1-type zinc finger prot ( 227) 1584 264.3 1.2e-70 XP_016866660 (OMIM: 607455) PREDICTED: AN1-type zi ( 211) 1304 219.4 3.8e-57 XP_011513092 (OMIM: 607455) PREDICTED: AN1-type zi ( 171) 835 144.1 1.4e-34 XP_005249326 (OMIM: 607455) PREDICTED: AN1-type zi ( 205) 761 132.3 6e-31 NP_005998 (OMIM: 604761) AN1-type zinc finger prot ( 213) 257 51.5 1.3e-06 NP_001095890 (OMIM: 604761) AN1-type zinc finger p ( 213) 257 51.5 1.3e-06 NP_001265172 (OMIM: 604761) AN1-type zinc finger p ( 213) 257 51.5 1.3e-06 NP_001265174 (OMIM: 604761) AN1-type zinc finger p ( 213) 257 51.5 1.3e-06 NP_001265173 (OMIM: 604761) AN1-type zinc finger p ( 213) 257 51.5 1.3e-06 NP_001095891 (OMIM: 604761) AN1-type zinc finger p ( 213) 257 51.5 1.3e-06 NP_001229846 (OMIM: 610183) AN1-type zinc finger p ( 196) 209 43.8 0.00025 NP_001229842 (OMIM: 610183) AN1-type zinc finger p ( 208) 191 40.9 0.002 NP_001229841 (OMIM: 610183) AN1-type zinc finger p ( 208) 191 40.9 0.002 NP_001229845 (OMIM: 610183) AN1-type zinc finger p ( 208) 191 40.9 0.002 NP_061879 (OMIM: 610183) AN1-type zinc finger prot ( 208) 191 40.9 0.002 NP_001229844 (OMIM: 610183) AN1-type zinc finger p ( 208) 191 40.9 0.002 NP_001229843 (OMIM: 610183) AN1-type zinc finger p ( 208) 191 40.9 0.002 XP_011519986 (OMIM: 610183) PREDICTED: AN1-type zi ( 208) 191 40.9 0.002 NP_001229840 (OMIM: 610183) AN1-type zinc finger p ( 208) 191 40.9 0.002 NP_001229848 (OMIM: 610183) AN1-type zinc finger p ( 181) 186 40.1 0.0031 >>NP_068762 (OMIM: 607455) AN1-type zinc finger protein (227 aa) initn: 1584 init1: 1584 opt: 1584 Z-score: 1389.1 bits: 264.3 E(85289): 1.2e-70 Smith-Waterman score: 1584; 100.0% identity (100.0% similar) in 227 aa overlap (1-227:1-227) 10 20 30 40 50 60 pF1KE3 MGDAGSERSKAPSLPPRCPCGFWGSSKTMNLCSKCFADFQKKQPDDDSAPSTSNSQSDLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_068 MGDAGSERSKAPSLPPRCPCGFWGSSKTMNLCSKCFADFQKKQPDDDSAPSTSNSQSDLF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 SEETTSDNNNTSITTPTLSPSQQPLPTELNVTSPSKEECGPCTDTAHVSLITPTKRSCGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_068 SEETTSDNNNTSITTPTLSPSQQPLPTELNVTSPSKEECGPCTDTAHVSLITPTKRSCGT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 DSQSENEASPVKRPRLLENTERSEETSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_068 DSQSENEASPVKRPRLLENTERSEETSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVF 130 140 150 160 170 180 190 200 210 220 pF1KE3 CMLHRLPEQHDCTFDHMGRGREEAIMKMVKLDRKVGRSCQRIGEGCS ::::::::::::::::::::::::::::::::::::::::::::::: NP_068 CMLHRLPEQHDCTFDHMGRGREEAIMKMVKLDRKVGRSCQRIGEGCS 190 200 210 220 >>XP_016866660 (OMIM: 607455) PREDICTED: AN1-type zinc f (211 aa) initn: 1302 init1: 1302 opt: 1304 Z-score: 1147.0 bits: 219.4 E(85289): 3.8e-57 Smith-Waterman score: 1304; 94.1% identity (96.6% similar) in 204 aa overlap (25-227:8-211) 10 20 30 40 50 pF1KE3 MGDAGSERSKAPSLPPRCPCGFWGSSKTMNLCSKCFA-DFQKKQPDDDSAPSTSNSQSDL : . . .:.. :::::::::::::::::::::: XP_016 MEHLHPASPSELIMCGNTSPKDFQKKQPDDDSAPSTSNSQSDL 10 20 30 40 60 70 80 90 100 110 pF1KE3 FSEETTSDNNNTSITTPTLSPSQQPLPTELNVTSPSKEECGPCTDTAHVSLITPTKRSCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FSEETTSDNNNTSITTPTLSPSQQPLPTELNVTSPSKEECGPCTDTAHVSLITPTKRSCG 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE3 TDSQSENEASPVKRPRLLENTERSEETSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TDSQSENEASPVKRPRLLENTERSEETSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYV 110 120 130 140 150 160 180 190 200 210 220 pF1KE3 FCMLHRLPEQHDCTFDHMGRGREEAIMKMVKLDRKVGRSCQRIGEGCS :::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FCMLHRLPEQHDCTFDHMGRGREEAIMKMVKLDRKVGRSCQRIGEGCS 170 180 190 200 210 >>XP_011513092 (OMIM: 607455) PREDICTED: AN1-type zinc f (171 aa) initn: 835 init1: 835 opt: 835 Z-score: 741.9 bits: 144.1 E(85289): 1.4e-34 Smith-Waterman score: 1087; 75.3% identity (75.3% similar) in 227 aa overlap (1-227:1-171) 10 20 30 40 50 60 pF1KE3 MGDAGSERSKAPSLPPRCPCGFWGSSKTMNLCSKCFADFQKKQPDDDSAPSTSNSQSDLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MGDAGSERSKAPSLPPRCPCGFWGSSKTMNLCSKCFADFQKKQPDDDSAPSTSNSQSDLF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 SEETTSDNNNTSITTPTLSPSQQPLPTELNVTSPSKEECGPCTDTAHVSLITPTKRSCGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SEETTSDNNNTSITTPTLSPSQQPLPTELNVTSPSKEECGPCTDTAHVSLITPTKRSCGT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 DSQSENEASPVKRPRLLENTERSEETSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVF :::: XP_011 --------------------------------------------------------GYVF 190 200 210 220 pF1KE3 CMLHRLPEQHDCTFDHMGRGREEAIMKMVKLDRKVGRSCQRIGEGCS ::::::::::::::::::::::::::::::::::::::::::::::: XP_011 CMLHRLPEQHDCTFDHMGRGREEAIMKMVKLDRKVGRSCQRIGEGCS 130 140 150 160 170 >>XP_005249326 (OMIM: 607455) PREDICTED: AN1-type zinc f (205 aa) initn: 1401 init1: 741 opt: 761 Z-score: 676.6 bits: 132.3 E(85289): 6e-31 Smith-Waterman score: 1358; 89.9% identity (89.9% similar) in 227 aa overlap (1-227:1-205) 10 20 30 40 50 60 pF1KE3 MGDAGSERSKAPSLPPRCPCGFWGSSKTMNLCSKCFADFQKKQPDDDSAPSTSNSQSDLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MGDAGSERSKAPSLPPRCPCGFWGSSKTMNLCSKCFADFQKKQPDDDSAPSTSNSQSDLF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 SEETTSDNNNTSITTPTLSPSQQPLPTELNVTSPSKEECGPCTDTAHVSLITPTKRSCGT :::::::::::::::::::::::::::::::::::::: XP_005 SEETTSDNNNTSITTPTLSPSQQPLPTELNVTSPSKEEY--------------------- 70 80 90 130 140 150 160 170 180 pF1KE3 DSQSENEASPVKRPRLLENTERSEETSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVF ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 -SQSENEASPVKRPRLLENTERSEETSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVF 100 110 120 130 140 150 190 200 210 220 pF1KE3 CMLHRLPEQHDCTFDHMGRGREEAIMKMVKLDRKVGRSCQRIGEGCS ::::::::::::::::::::::::::::::::::::::::::::::: XP_005 CMLHRLPEQHDCTFDHMGRGREEAIMKMVKLDRKVGRSCQRIGEGCS 160 170 180 190 200 >>NP_005998 (OMIM: 604761) AN1-type zinc finger protein (213 aa) initn: 251 init1: 120 opt: 257 Z-score: 239.6 bits: 51.5 E(85289): 1.3e-06 Smith-Waterman score: 262; 28.5% identity (57.5% similar) in 228 aa overlap (7-222:4-213) 10 20 30 40 50 pF1KE3 MGDAGSERSKAPSLPPRCP--CGFWGSSKTMNLCSKCFAD-FQKKQPDDDSAP----STS : ...:. : : :::.:. .: ..:: :. . .:..: . .: : : NP_005 MAQETNQTPG-PMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGS 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 NSQ-SDLFS-EETTSDNNNTSITTPTLSPSQQPLPTELNVTSPSKEECGPCTDTAHVSLI :: :: : ... .. :: .. . : ... .:. .. : .. . . . .. NP_005 NSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPV---AALPVTQQMTEMSISREDKIT 60 70 80 90 100 110 120 130 140 150 160 pF1KE3 TP-TKRSCGTDSQSENEASP-VKRPRLLENTERSEETSRSKQKSRRRCFQCQTKLELVQQ :: :. : . .: :: :..: .. :.. : . : . :::.:. :. :. NP_005 TPKTEVSEPVVTQ----PSPSVSQPSTSQSEEKAPELPKPK---KNRCFMCRKKVGLTGF 120 130 140 150 160 170 180 190 200 210 220 pF1KE3 ELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGREEAIMKMVKLDRKV-GRSCQRIGEGCS . :::: .:: ::: ..:.: .:. . :: :. : . : ... ::: NP_005 D---CRCGNLFCGLHRYSDKHNCPYDY----KAEAAAKIRKENPVVVAEKIQRI 170 180 190 200 210 >>NP_001095890 (OMIM: 604761) AN1-type zinc finger prote (213 aa) initn: 251 init1: 120 opt: 257 Z-score: 239.6 bits: 51.5 E(85289): 1.3e-06 Smith-Waterman score: 262; 28.5% identity (57.5% similar) in 228 aa overlap (7-222:4-213) 10 20 30 40 50 pF1KE3 MGDAGSERSKAPSLPPRCP--CGFWGSSKTMNLCSKCFAD-FQKKQPDDDSAP----STS : ...:. : : :::.:. .: ..:: :. . .:..: . .: : : NP_001 MAQETNQTPG-PMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGS 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 NSQ-SDLFS-EETTSDNNNTSITTPTLSPSQQPLPTELNVTSPSKEECGPCTDTAHVSLI :: :: : ... .. :: .. . : ... .:. .. : .. . . . .. NP_001 NSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPV---AALPVTQQMTEMSISREDKIT 60 70 80 90 100 110 120 130 140 150 160 pF1KE3 TP-TKRSCGTDSQSENEASP-VKRPRLLENTERSEETSRSKQKSRRRCFQCQTKLELVQQ :: :. : . .: :: :..: .. :.. : . : . :::.:. :. :. NP_001 TPKTEVSEPVVTQ----PSPSVSQPSTSQSEEKAPELPKPK---KNRCFMCRKKVGLTGF 120 130 140 150 160 170 180 190 200 210 220 pF1KE3 ELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGREEAIMKMVKLDRKV-GRSCQRIGEGCS . :::: .:: ::: ..:.: .:. . :: :. : . : ... ::: NP_001 D---CRCGNLFCGLHRYSDKHNCPYDY----KAEAAAKIRKENPVVVAEKIQRI 170 180 190 200 210 >>NP_001265172 (OMIM: 604761) AN1-type zinc finger prote (213 aa) initn: 251 init1: 120 opt: 257 Z-score: 239.6 bits: 51.5 E(85289): 1.3e-06 Smith-Waterman score: 262; 28.5% identity (57.5% similar) in 228 aa overlap (7-222:4-213) 10 20 30 40 50 pF1KE3 MGDAGSERSKAPSLPPRCP--CGFWGSSKTMNLCSKCFAD-FQKKQPDDDSAP----STS : ...:. : : :::.:. .: ..:: :. . .:..: . .: : : NP_001 MAQETNQTPG-PMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGS 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 NSQ-SDLFS-EETTSDNNNTSITTPTLSPSQQPLPTELNVTSPSKEECGPCTDTAHVSLI :: :: : ... .. :: .. . : ... .:. .. : .. . . . .. NP_001 NSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPV---AALPVTQQMTEMSISREDKIT 60 70 80 90 100 110 120 130 140 150 160 pF1KE3 TP-TKRSCGTDSQSENEASP-VKRPRLLENTERSEETSRSKQKSRRRCFQCQTKLELVQQ :: :. : . .: :: :..: .. :.. : . : . :::.:. :. :. NP_001 TPKTEVSEPVVTQ----PSPSVSQPSTSQSEEKAPELPKPK---KNRCFMCRKKVGLTGF 120 130 140 150 160 170 180 190 200 210 220 pF1KE3 ELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGREEAIMKMVKLDRKV-GRSCQRIGEGCS . :::: .:: ::: ..:.: .:. . :: :. : . : ... ::: NP_001 D---CRCGNLFCGLHRYSDKHNCPYDY----KAEAAAKIRKENPVVVAEKIQRI 170 180 190 200 210 >>NP_001265174 (OMIM: 604761) AN1-type zinc finger prote (213 aa) initn: 251 init1: 120 opt: 257 Z-score: 239.6 bits: 51.5 E(85289): 1.3e-06 Smith-Waterman score: 262; 28.5% identity (57.5% similar) in 228 aa overlap (7-222:4-213) 10 20 30 40 50 pF1KE3 MGDAGSERSKAPSLPPRCP--CGFWGSSKTMNLCSKCFAD-FQKKQPDDDSAP----STS : ...:. : : :::.:. .: ..:: :. . .:..: . .: : : NP_001 MAQETNQTPG-PMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGS 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 NSQ-SDLFS-EETTSDNNNTSITTPTLSPSQQPLPTELNVTSPSKEECGPCTDTAHVSLI :: :: : ... .. :: .. . : ... .:. .. : .. . . . .. NP_001 NSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPV---AALPVTQQMTEMSISREDKIT 60 70 80 90 100 110 120 130 140 150 160 pF1KE3 TP-TKRSCGTDSQSENEASP-VKRPRLLENTERSEETSRSKQKSRRRCFQCQTKLELVQQ :: :. : . .: :: :..: .. :.. : . : . :::.:. :. :. NP_001 TPKTEVSEPVVTQ----PSPSVSQPSTSQSEEKAPELPKPK---KNRCFMCRKKVGLTGF 120 130 140 150 160 170 180 190 200 210 220 pF1KE3 ELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGREEAIMKMVKLDRKV-GRSCQRIGEGCS . :::: .:: ::: ..:.: .:. . :: :. : . : ... ::: NP_001 D---CRCGNLFCGLHRYSDKHNCPYDY----KAEAAAKIRKENPVVVAEKIQRI 170 180 190 200 210 >>NP_001265173 (OMIM: 604761) AN1-type zinc finger prote (213 aa) initn: 251 init1: 120 opt: 257 Z-score: 239.6 bits: 51.5 E(85289): 1.3e-06 Smith-Waterman score: 262; 28.5% identity (57.5% similar) in 228 aa overlap (7-222:4-213) 10 20 30 40 50 pF1KE3 MGDAGSERSKAPSLPPRCP--CGFWGSSKTMNLCSKCFAD-FQKKQPDDDSAP----STS : ...:. : : :::.:. .: ..:: :. . .:..: . .: : : NP_001 MAQETNQTPG-PMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGS 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 NSQ-SDLFS-EETTSDNNNTSITTPTLSPSQQPLPTELNVTSPSKEECGPCTDTAHVSLI :: :: : ... .. :: .. . : ... .:. .. : .. . . . .. NP_001 NSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPV---AALPVTQQMTEMSISREDKIT 60 70 80 90 100 110 120 130 140 150 160 pF1KE3 TP-TKRSCGTDSQSENEASP-VKRPRLLENTERSEETSRSKQKSRRRCFQCQTKLELVQQ :: :. : . .: :: :..: .. :.. : . : . :::.:. :. :. NP_001 TPKTEVSEPVVTQ----PSPSVSQPSTSQSEEKAPELPKPK---KNRCFMCRKKVGLTGF 120 130 140 150 160 170 180 190 200 210 220 pF1KE3 ELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGREEAIMKMVKLDRKV-GRSCQRIGEGCS . :::: .:: ::: ..:.: .:. . :: :. : . : ... ::: NP_001 D---CRCGNLFCGLHRYSDKHNCPYDY----KAEAAAKIRKENPVVVAEKIQRI 170 180 190 200 210 >>NP_001095891 (OMIM: 604761) AN1-type zinc finger prote (213 aa) initn: 251 init1: 120 opt: 257 Z-score: 239.6 bits: 51.5 E(85289): 1.3e-06 Smith-Waterman score: 262; 28.5% identity (57.5% similar) in 228 aa overlap (7-222:4-213) 10 20 30 40 50 pF1KE3 MGDAGSERSKAPSLPPRCP--CGFWGSSKTMNLCSKCFAD-FQKKQPDDDSAP----STS : ...:. : : :::.:. .: ..:: :. . .:..: . .: : : NP_001 MAQETNQTPG-PMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGS 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 NSQ-SDLFS-EETTSDNNNTSITTPTLSPSQQPLPTELNVTSPSKEECGPCTDTAHVSLI :: :: : ... .. :: .. . : ... .:. .. : .. . . . .. NP_001 NSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPV---AALPVTQQMTEMSISREDKIT 60 70 80 90 100 110 120 130 140 150 160 pF1KE3 TP-TKRSCGTDSQSENEASP-VKRPRLLENTERSEETSRSKQKSRRRCFQCQTKLELVQQ :: :. : . .: :: :..: .. :.. : . : . :::.:. :. :. NP_001 TPKTEVSEPVVTQ----PSPSVSQPSTSQSEEKAPELPKPK---KNRCFMCRKKVGLTGF 120 130 140 150 160 170 180 190 200 210 220 pF1KE3 ELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGREEAIMKMVKLDRKV-GRSCQRIGEGCS . :::: .:: ::: ..:.: .:. . :: :. : . : ... ::: NP_001 D---CRCGNLFCGLHRYSDKHNCPYDY----KAEAAAKIRKENPVVVAEKIQRI 170 180 190 200 210 227 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 09:00:00 2016 done: Sun Nov 6 09:00:01 2016 Total Scan time: 7.360 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]