FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3914, 227 aa 1>>>pF1KE3914 227 - 227 aa - 227 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.0502+/-0.000695; mu= 7.1432+/- 0.042 mean_var=117.3753+/-23.201, 0's: 0 Z-trim(114.7): 11 B-trim: 404 in 1/51 Lambda= 0.118382 statistics sampled from 15301 (15308) to 15301 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.809), E-opt: 0.2 (0.47), width: 16 Scan time: 2.380 The best scores are: opt bits E(32554) CCDS4836.1 ZFAND3 gene_id:60685|Hs108|chr6 ( 227) 1584 280.4 6.8e-76 >>CCDS4836.1 ZFAND3 gene_id:60685|Hs108|chr6 (227 aa) initn: 1584 init1: 1584 opt: 1584 Z-score: 1476.1 bits: 280.4 E(32554): 6.8e-76 Smith-Waterman score: 1584; 100.0% identity (100.0% similar) in 227 aa overlap (1-227:1-227) 10 20 30 40 50 60 pF1KE3 MGDAGSERSKAPSLPPRCPCGFWGSSKTMNLCSKCFADFQKKQPDDDSAPSTSNSQSDLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 MGDAGSERSKAPSLPPRCPCGFWGSSKTMNLCSKCFADFQKKQPDDDSAPSTSNSQSDLF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 SEETTSDNNNTSITTPTLSPSQQPLPTELNVTSPSKEECGPCTDTAHVSLITPTKRSCGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 SEETTSDNNNTSITTPTLSPSQQPLPTELNVTSPSKEECGPCTDTAHVSLITPTKRSCGT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 DSQSENEASPVKRPRLLENTERSEETSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 DSQSENEASPVKRPRLLENTERSEETSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVF 130 140 150 160 170 180 190 200 210 220 pF1KE3 CMLHRLPEQHDCTFDHMGRGREEAIMKMVKLDRKVGRSCQRIGEGCS ::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 CMLHRLPEQHDCTFDHMGRGREEAIMKMVKLDRKVGRSCQRIGEGCS 190 200 210 220 227 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 08:59:59 2016 done: Sun Nov 6 09:00:00 2016 Total Scan time: 2.380 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]