FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6110, 161 aa 1>>>pF1KE6110 161 - 161 aa - 161 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3774+/-0.000912; mu= 13.2397+/- 0.056 mean_var=108.8207+/-20.985, 0's: 0 Z-trim(108.6): 109 B-trim: 17 in 2/51 Lambda= 0.122947 statistics sampled from 10182 (10314) to 10182 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.693), E-opt: 0.2 (0.317), width: 16 Scan time: 1.560 The best scores are: opt bits E(32554) CCDS2857.1 TNNC1 gene_id:7134|Hs108|chr3 ( 161) 1058 197.6 2.7e-51 CCDS13375.1 TNNC2 gene_id:7125|Hs108|chr20 ( 160) 673 129.3 9.8e-31 CCDS33061.1 CALM3 gene_id:808|Hs108|chr19 ( 149) 512 100.7 3.7e-22 CCDS1832.1 CALM2 gene_id:805|Hs108|chr2 ( 149) 512 100.7 3.7e-22 CCDS9892.1 CALM1 gene_id:801|Hs108|chr14 ( 149) 512 100.7 3.7e-22 CCDS7069.1 CALML3 gene_id:810|Hs108|chr10 ( 149) 488 96.5 7.1e-21 CCDS11820.1 CETN1 gene_id:1068|Hs108|chr18 ( 172) 375 76.5 8.4e-15 CCDS14716.1 CETN2 gene_id:1069|Hs108|chrX ( 172) 365 74.7 2.9e-14 CCDS81255.1 CALML6 gene_id:163688|Hs108|chr1 ( 164) 352 72.4 1.4e-13 CCDS30566.1 CALML6 gene_id:163688|Hs108|chr1 ( 181) 352 72.5 1.5e-13 CCDS9204.1 CABP1 gene_id:9478|Hs108|chr12 ( 167) 324 67.4 4.4e-12 CCDS9205.1 CABP1 gene_id:9478|Hs108|chr12 ( 227) 324 67.6 5.3e-12 CCDS31913.1 CABP1 gene_id:9478|Hs108|chr12 ( 370) 324 67.8 7.4e-12 CCDS7068.1 CALML5 gene_id:51806|Hs108|chr10 ( 146) 309 64.7 2.5e-11 CCDS8905.1 MYL6B gene_id:140465|Hs108|chr12 ( 208) 302 63.7 7.5e-11 >>CCDS2857.1 TNNC1 gene_id:7134|Hs108|chr3 (161 aa) initn: 1058 init1: 1058 opt: 1058 Z-score: 1034.3 bits: 197.6 E(32554): 2.7e-51 Smith-Waterman score: 1058; 100.0% identity (100.0% similar) in 161 aa overlap (1-161:1-161) 10 20 30 40 50 60 pF1KE6 MDDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS28 MDDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 IDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS28 IDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIM 70 80 90 100 110 120 130 140 150 160 pF1KE6 LQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGVE ::::::::::::::::::::::::::::::::::::::::: CCDS28 LQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGVE 130 140 150 160 >>CCDS13375.1 TNNC2 gene_id:7125|Hs108|chr20 (160 aa) initn: 849 init1: 610 opt: 673 Z-score: 665.3 bits: 129.3 E(32554): 9.8e-31 Smith-Waterman score: 673; 64.8% identity (84.0% similar) in 162 aa overlap (1-161:1-160) 10 20 30 40 50 pF1KE6 MDDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGC-ISTKELGKVMRMLGQNPTPEELQE : : : :.::. :::::::.: :. : ::.:::: :::::::.:: :::. CCDS13 MTDQQAEARSYLSEEMIAEFKAAFDMF--DADGGGDISVKELGTVMRMLGQTPTKEELDA 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 MIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKI .:.:::::::::.::.:::::::: ::.:.::::::::.. ::.::.::::::: .:: CCDS13 IIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDPEELAE 60 70 80 90 100 110 120 130 140 150 160 pF1KE6 MLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGVE ...:.:: .:...:: ::::::::::::::.::::..:.::. CCDS13 IFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMMEGVQ 120 130 140 150 160 >>CCDS33061.1 CALM3 gene_id:808|Hs108|chr19 (149 aa) initn: 521 init1: 267 opt: 512 Z-score: 511.3 bits: 100.7 E(32554): 3.7e-22 Smith-Waterman score: 512; 52.0% identity (80.4% similar) in 148 aa overlap (10-157:3-146) 10 20 30 40 50 60 pF1KE6 MDDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEM .:::::: ::: ::..: . :: :.::::: ::: :::::: :::.: CCDS33 MADQLTEEQIAEFKEAFSLFDKDG-DGTITTKELGTVMRSLGQNPTEAELQDM 10 20 30 40 50 70 80 90 100 110 120 pF1KE6 IDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIM :.::: ::.::.:: :::.::.: ::: . ::::. . ::.:::...:::. ::. . CCDS33 INEVDADGNGTIDFPEFLTMMARKMKDTD---SEEEIREAFRVFDKDGNGYISAAELRHV 60 70 80 90 100 130 140 150 160 pF1KE6 LQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGVE . :: .:.....:.....: ..::...:.::...: CCDS33 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 110 120 130 140 >>CCDS1832.1 CALM2 gene_id:805|Hs108|chr2 (149 aa) initn: 521 init1: 267 opt: 512 Z-score: 511.3 bits: 100.7 E(32554): 3.7e-22 Smith-Waterman score: 512; 52.0% identity (80.4% similar) in 148 aa overlap (10-157:3-146) 10 20 30 40 50 60 pF1KE6 MDDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEM .:::::: ::: ::..: . :: :.::::: ::: :::::: :::.: CCDS18 MADQLTEEQIAEFKEAFSLFDKDG-DGTITTKELGTVMRSLGQNPTEAELQDM 10 20 30 40 50 70 80 90 100 110 120 pF1KE6 IDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIM :.::: ::.::.:: :::.::.: ::: . ::::. . ::.:::...:::. ::. . CCDS18 INEVDADGNGTIDFPEFLTMMARKMKDTD---SEEEIREAFRVFDKDGNGYISAAELRHV 60 70 80 90 100 130 140 150 160 pF1KE6 LQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGVE . :: .:.....:.....: ..::...:.::...: CCDS18 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 110 120 130 140 >>CCDS9892.1 CALM1 gene_id:801|Hs108|chr14 (149 aa) initn: 521 init1: 267 opt: 512 Z-score: 511.3 bits: 100.7 E(32554): 3.7e-22 Smith-Waterman score: 512; 52.0% identity (80.4% similar) in 148 aa overlap (10-157:3-146) 10 20 30 40 50 60 pF1KE6 MDDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEM .:::::: ::: ::..: . :: :.::::: ::: :::::: :::.: CCDS98 MADQLTEEQIAEFKEAFSLFDKDG-DGTITTKELGTVMRSLGQNPTEAELQDM 10 20 30 40 50 70 80 90 100 110 120 pF1KE6 IDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIM :.::: ::.::.:: :::.::.: ::: . ::::. . ::.:::...:::. ::. . CCDS98 INEVDADGNGTIDFPEFLTMMARKMKDTD---SEEEIREAFRVFDKDGNGYISAAELRHV 60 70 80 90 100 130 140 150 160 pF1KE6 LQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGVE . :: .:.....:.....: ..::...:.::...: CCDS98 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 110 120 130 140 >>CCDS7069.1 CALML3 gene_id:810|Hs108|chr10 (149 aa) initn: 496 init1: 264 opt: 488 Z-score: 488.3 bits: 96.5 E(32554): 7.1e-21 Smith-Waterman score: 488; 47.3% identity (80.4% similar) in 148 aa overlap (10-157:3-146) 10 20 30 40 50 60 pF1KE6 MDDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEM .:::::: .::: ::..: . ::::.:.::: ::: :::::: ::..: CCDS70 MADQLTEEQVTEFKEAFSLFDKDG-DGCITTRELGTVMRSLGQNPTEAELRDM 10 20 30 40 50 70 80 90 100 110 120 pF1KE6 IDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIM ..:.:.::.::::: ::: ::.: ::: . .:::. . ::.:::...:... ::. . CCDS70 MSEIDRDGNGTVDFPEFLGMMARKMKDTD---NEEEIREAFRVFDKDGNGFVSAAELRHV 60 70 80 90 100 130 140 150 160 pF1KE6 LQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGVE . :: .......:... .: ..::...:.::.. . CCDS70 MTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVRVLVSK 110 120 130 140 >>CCDS11820.1 CETN1 gene_id:1068|Hs108|chr18 (172 aa) initn: 272 init1: 172 opt: 375 Z-score: 379.2 bits: 76.5 E(32554): 8.4e-15 Smith-Waterman score: 375; 38.5% identity (77.7% similar) in 148 aa overlap (11-158:24-167) 10 20 30 40 pF1KE6 MDDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRM .:::.::.: . :::.: . . .: :..::: .:: CCDS11 MASGFKKPSAASTGQKRKVAPKPELTEDQKQEVREAFDLFDVDG-SGTIDAKELKVAMRA 10 20 30 40 50 50 60 70 80 90 100 pF1KE6 LGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKN :: .: ::...::.:::..:.: ..:..::..:.. : :. ..::. ::.:: . CCDS11 LGFEPRKEEMKKMISEVDREGTGKISFNDFLAVMTQKM---SEKDTKEEILKAFRLFDDD 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE6 ADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGVE : :.. .:: . . ::..:.....:.. ..:...::... .:::..:: CCDS11 ETGKISFKNLKRVANELGENLTDEELQEMIDEADRDGDGEVNEEEFLRIMKKTSLY 120 130 140 150 160 170 >>CCDS14716.1 CETN2 gene_id:1069|Hs108|chrX (172 aa) initn: 270 init1: 166 opt: 365 Z-score: 369.6 bits: 74.7 E(32554): 2.9e-14 Smith-Waterman score: 365; 37.8% identity (76.4% similar) in 148 aa overlap (11-158:24-167) 10 20 30 40 pF1KE6 MDDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRM .::::::.:.. :::.: . : :..::: .:: CCDS14 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGT-GTIDVKELKVAMRA 10 20 30 40 50 50 60 70 80 90 100 pF1KE6 LGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKN :: .: ::...::.:.:..:.: ..: .::..:.. : :. ..::. :..:: . CCDS14 LGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKM---SEKDTKEEILKAFKLFDDD 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE6 ADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGVE : :.. .:: . . ::..:.....:.. ..:...::... .:::..:: CCDS14 ETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY 120 130 140 150 160 170 >>CCDS81255.1 CALML6 gene_id:163688|Hs108|chr1 (164 aa) initn: 340 init1: 201 opt: 352 Z-score: 357.4 bits: 72.4 E(32554): 1.4e-13 Smith-Waterman score: 352; 40.0% identity (70.0% similar) in 150 aa overlap (10-159:11-157) 10 20 30 40 50 pF1KE6 MDDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQE :.:. :: .:.:..:..: . .: ..: :: .: .:: ::: :: CCDS81 MGLQQEISLTERLSAEQIKEYKGVFEMFDEEG-NGEVKTGELEWLMSLLGINPTKSELAS 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 MIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKI : .::.:..: . : ::..: . .. ..: :: ::.:::.. :::: . :: CCDS81 MAKDVDRDNKGFFNCDGFLALM--GVYHEKAQNQESELRAAFRVFDKEGKGYIDWNTLKY 60 70 80 90 100 110 120 130 140 150 160 pF1KE6 MLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGVE .:. .:: ..: . :..::..::..: :::.::. .: : CCDS81 VLMNAGEPLNEVEAEQMMKEADKDGDRTIDYEEFVAMMTGESFKLIQ 120 130 140 150 160 >>CCDS30566.1 CALML6 gene_id:163688|Hs108|chr1 (181 aa) initn: 340 init1: 201 opt: 352 Z-score: 356.9 bits: 72.5 E(32554): 1.5e-13 Smith-Waterman score: 352; 40.0% identity (70.0% similar) in 150 aa overlap (10-159:28-174) 10 20 30 40 pF1KE6 MDDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELG :.:. :: .:.:..:..: . .: ..: :: CCDS30 MGLQQEISLQPWCHHPAESCQTTTDMTERLSAEQIKEYKGVFEMFDEEG-NGEVKTGELE 10 20 30 40 50 50 60 70 80 90 100 pF1KE6 KVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFR .: .:: ::: :: : .::.:..: . : ::..: . .. ..: :: :: CCDS30 WLMSLLGINPTKSELASMAKDVDRDNKGFFNCDGFLALM--GVYHEKAQNQESELRAAFR 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE6 MFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGVE .:::.. :::: . :: .:. .:: ..: . :..::..::..: :::.::. .: : CCDS30 VFDKEGKGYIDWNTLKYVLMNAGEPLNEVEAEQMMKEADKDGDRTIDYEEFVAMMTGESF 120 130 140 150 160 170 CCDS30 KLIQ 180 161 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 09:32:00 2016 done: Tue Nov 8 09:32:00 2016 Total Scan time: 1.560 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]