FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4330, 338 aa 1>>>pF1KE4330 338 - 338 aa - 338 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6815+/-0.000895; mu= 13.6901+/- 0.054 mean_var=62.7311+/-12.501, 0's: 0 Z-trim(105.5): 16 B-trim: 3 in 1/50 Lambda= 0.161932 statistics sampled from 8461 (8468) to 8461 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.644), E-opt: 0.2 (0.26), width: 16 Scan time: 2.390 The best scores are: opt bits E(32554) CCDS7097.1 PHYH gene_id:5264|Hs108|chr10 ( 338) 2304 546.9 8.6e-156 CCDS41489.1 PHYH gene_id:5264|Hs108|chr10 ( 238) 1653 394.8 3.8e-110 >>CCDS7097.1 PHYH gene_id:5264|Hs108|chr10 (338 aa) initn: 2304 init1: 2304 opt: 2304 Z-score: 2910.4 bits: 546.9 E(32554): 8.6e-156 Smith-Waterman score: 2304; 100.0% identity (100.0% similar) in 338 aa overlap (1-338:1-338) 10 20 30 40 50 60 pF1KE4 MEQLRAAARLQIVLGHLGRPSAGAVVAHPTSGTISSASFHPQQFQYTLDNNVLTLEQRKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 MEQLRAAARLQIVLGHLGRPSAGAVVAHPTSGTISSASFHPQQFQYTLDNNVLTLEQRKF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 YEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 YEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 VQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKTSRHPLHQDLHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 VQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKTSRHPLHQDLHY 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 FPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPHDYPKWEGGVNKMFHGIQDYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 FPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPHDYPKWEGGVNKMFHGIQDYE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 ENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQENI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 ENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQENI 250 260 270 280 290 300 310 320 330 pF1KE4 EKEVVGIAHKFFGAENSVNLKDIWMFRARLVKGERTNL :::::::::::::::::::::::::::::::::::::: CCDS70 EKEVVGIAHKFFGAENSVNLKDIWMFRARLVKGERTNL 310 320 330 >>CCDS41489.1 PHYH gene_id:5264|Hs108|chr10 (238 aa) initn: 1653 init1: 1653 opt: 1653 Z-score: 2091.0 bits: 394.8 E(32554): 3.8e-110 Smith-Waterman score: 1653; 100.0% identity (100.0% similar) in 238 aa overlap (101-338:1-238) 80 90 100 110 120 130 pF1KE4 NLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITKVQDFQEDKEL :::::::::::::::::::::::::::::: CCDS41 MRDVTISKSEYAPSEKMITKVQDFQEDKEL 10 20 30 140 150 160 170 180 190 pF1KE4 FRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKTSRHPLHQDLHYFPFRPSDLIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 FRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKTSRHPLHQDLHYFPFRPSDLIV 40 50 60 70 80 90 200 210 220 230 240 250 pF1KE4 CAWTAMEHISRNNGCLVVLPGTHKGSLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 CAWTAMEHISRNNGCLVVLPGTHKGSLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVM 100 110 120 130 140 150 260 270 280 290 300 310 pF1KE4 EKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQENIEKEVVGIAHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 EKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQENIEKEVVGIAHK 160 170 180 190 200 210 320 330 pF1KE4 FFGAENSVNLKDIWMFRARLVKGERTNL :::::::::::::::::::::::::::: CCDS41 FFGAENSVNLKDIWMFRARLVKGERTNL 220 230 338 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 23:08:56 2016 done: Sat Nov 5 23:08:57 2016 Total Scan time: 2.390 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]