FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1480, 97 aa 1>>>pF1KE1480 97 - 97 aa - 97 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.8525+/-0.000258; mu= 11.6392+/- 0.016 mean_var=53.0883+/-10.409, 0's: 0 Z-trim(120.2): 11 B-trim: 234 in 1/55 Lambda= 0.176025 statistics sampled from 35021 (35034) to 35021 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.789), E-opt: 0.2 (0.411), width: 16 Scan time: 4.350 The best scores are: opt bits E(85289) NP_000896 (OMIM: 162640) pro-neuropeptide Y prepro ( 97) 637 168.5 1.5e-42 NP_004151 (OMIM: 600781) peptide YY preproprotein ( 97) 338 92.6 1.1e-19 XP_011523337 (OMIM: 600781) PREDICTED: peptide YY ( 97) 327 89.8 7.6e-19 NP_001306138 (OMIM: 167780) pancreatic prohormone ( 101) 178 51.9 1.9e-07 NP_002713 (OMIM: 167780) pancreatic prohormone iso ( 95) 175 51.2 3.1e-07 XP_011523280 (OMIM: 167780) PREDICTED: pancreatic ( 104) 175 51.2 3.4e-07 >>NP_000896 (OMIM: 162640) pro-neuropeptide Y preproprot (97 aa) initn: 637 init1: 637 opt: 637 Z-score: 884.8 bits: 168.5 E(85289): 1.5e-42 Smith-Waterman score: 637; 100.0% identity (100.0% similar) in 97 aa overlap (1-97:1-97) 10 20 30 40 50 60 pF1KE1 MLGNKRLGLSGLTLALSLLVCLGALAEAYPSKPDNPGEDAPAEDMARYYSALRHYINLIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 MLGNKRLGLSGLTLALSLLVCLGALAEAYPSKPDNPGEDAPAEDMARYYSALRHYINLIT 10 20 30 40 50 60 70 80 90 pF1KE1 RQRYGKRSSPETLISDLLMRESTENVPRTRLEDPAMW ::::::::::::::::::::::::::::::::::::: NP_000 RQRYGKRSSPETLISDLLMRESTENVPRTRLEDPAMW 70 80 90 >>NP_004151 (OMIM: 600781) peptide YY preproprotein [Hom (97 aa) initn: 320 init1: 292 opt: 338 Z-score: 474.4 bits: 92.6 E(85289): 1.1e-19 Smith-Waterman score: 338; 55.3% identity (81.2% similar) in 85 aa overlap (13-97:13-97) 10 20 30 40 50 60 pF1KE1 MLGNKRLGLSGLTLALSLLVCLGALAEAYPSKPDNPGEDAPAEDMARYYSALRHYINLIT :. :.::::::::..::: ::. ::::: :.. :::..::::.::.: NP_004 MVFVRRPWPALTTVLLALLVCLGALVDAYPIKPEAPGEDASPEELNRYYASLRHYLNLVT 10 20 30 40 50 60 70 80 90 pF1KE1 RQRYGKRSSPETLISDLLMRESTENVPRTRLEDPAMW :::::::..:.::.: .. .. . :.: : : .: NP_004 RQRYGKRDGPDTLLSKTFFPDGEDRPVRSRSEGPDLW 70 80 90 >>XP_011523337 (OMIM: 600781) PREDICTED: peptide YY isof (97 aa) initn: 307 init1: 281 opt: 327 Z-score: 459.3 bits: 89.8 E(85289): 7.6e-19 Smith-Waterman score: 327; 54.1% identity (80.0% similar) in 85 aa overlap (13-97:13-97) 10 20 30 40 50 60 pF1KE1 MLGNKRLGLSGLTLALSLLVCLGALAEAYPSKPDNPGEDAPAEDMARYYSALRHYINLIT :. :.::::::::..::: ::. : ::: :.. :::..::::.::.: XP_011 MVFVRRPWPALTTVLLALLVCLGALVDAYPIKPEAPREDASPEELNRYYASLRHYLNLVT 10 20 30 40 50 60 70 80 90 pF1KE1 RQRYGKRSSPETLISDLLMRESTENVPRTRLEDPAMW :::::::..:.::.: .. .. . :.: : : .: XP_011 RQRYGKRDGPDTLLSKTFFPDGEDRPVRSRSEGPDLW 70 80 90 >>NP_001306138 (OMIM: 167780) pancreatic prohormone isof (101 aa) initn: 182 init1: 160 opt: 178 Z-score: 254.5 bits: 51.9 E(85289): 1.9e-07 Smith-Waterman score: 178; 42.7% identity (68.0% similar) in 75 aa overlap (1-73:6-80) 10 20 30 40 50 pF1KE1 MLGNKRLGLSGLTLALSLLVCLGAL--AEAYPSKPDNPGEDAPAEDMARYYSALR ... :: :: : :. . . : : :.. : .: ::..: :.::.: . :: NP_001 MCDCDLMAAARLCLSLLLLSTCVALLLQPLLGAQGAPLEPVYPGDNATPEQMAQYAADLR 10 20 30 40 50 60 60 70 80 90 pF1KE1 HYINLITRQRYGKRSSPETLISDLLMRESTENVPRTRLEDPAMW .:::..:: ::::: . .:: NP_001 RYINMLTRPRYGKRHKEDTLAFSEWGSPHAAVPRELSPLDL 70 80 90 100 >>NP_002713 (OMIM: 167780) pancreatic prohormone isoform (95 aa) initn: 182 init1: 160 opt: 175 Z-score: 250.8 bits: 51.2 E(85289): 3.1e-07 Smith-Waterman score: 175; 43.2% identity (67.6% similar) in 74 aa overlap (2-73:1-74) 10 20 30 40 50 pF1KE1 MLGNKRLGLSGLTLALSLLVCLGAL--AEAYPSKPDNPGEDAPAEDMARYYSALRHYINL .. :: :: : :. . . : : :.. : .: ::..: :.::.: . ::.:::. NP_002 MAAARLCLSLLLLSTCVALLLQPLLGAQGAPLEPVYPGDNATPEQMAQYAADLRRYINM 10 20 30 40 50 60 70 80 90 pF1KE1 ITRQRYGKRSSPETLISDLLMRESTENVPRTRLEDPAMW .:: ::::: . .:: NP_002 LTRPRYGKRHKEDTLAFSEWGSPHAAVPRELSPLDL 60 70 80 90 >>XP_011523280 (OMIM: 167780) PREDICTED: pancreatic proh (104 aa) initn: 182 init1: 160 opt: 175 Z-score: 250.2 bits: 51.2 E(85289): 3.4e-07 Smith-Waterman score: 175; 43.2% identity (67.6% similar) in 74 aa overlap (2-73:10-83) 10 20 30 40 50 pF1KE1 MLGNKRLGLSGLTLALSLLVCLGAL--AEAYPSKPDNPGEDAPAEDMARYYS .. :: :: : :. . . : : :.. : .: ::..: :.::.: . XP_011 MTFVFALWNMAAARLCLSLLLLSTCVALLLQPLLGAQGAPLEPVYPGDNATPEQMAQYAA 10 20 30 40 50 60 60 70 80 90 pF1KE1 ALRHYINLITRQRYGKRSSPETLISDLLMRESTENVPRTRLEDPAMW ::.:::..:: ::::: . .:: XP_011 DLRRYINMLTRPRYGKRHKEDTLAFSEWGSPHAAVPRELSPLDL 70 80 90 100 97 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 00:17:45 2016 done: Mon Nov 7 00:17:46 2016 Total Scan time: 4.350 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]