FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1480, 97 aa 1>>>pF1KE1480 97 - 97 aa - 97 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.6579+/-0.000524; mu= 12.9555+/- 0.032 mean_var=54.6394+/-10.701, 0's: 0 Z-trim(113.4): 11 B-trim: 38 in 1/50 Lambda= 0.173509 statistics sampled from 14050 (14056) to 14050 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.809), E-opt: 0.2 (0.432), width: 16 Scan time: 1.610 The best scores are: opt bits E(32554) CCDS5387.1 NPY gene_id:4852|Hs108|chr7 ( 97) 637 166.1 3e-42 CCDS32662.1 PYY gene_id:5697|Hs108|chr17 ( 97) 327 88.5 6.9e-19 >>CCDS5387.1 NPY gene_id:4852|Hs108|chr7 (97 aa) initn: 637 init1: 637 opt: 637 Z-score: 872.0 bits: 166.1 E(32554): 3e-42 Smith-Waterman score: 637; 100.0% identity (100.0% similar) in 97 aa overlap (1-97:1-97) 10 20 30 40 50 60 pF1KE1 MLGNKRLGLSGLTLALSLLVCLGALAEAYPSKPDNPGEDAPAEDMARYYSALRHYINLIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 MLGNKRLGLSGLTLALSLLVCLGALAEAYPSKPDNPGEDAPAEDMARYYSALRHYINLIT 10 20 30 40 50 60 70 80 90 pF1KE1 RQRYGKRSSPETLISDLLMRESTENVPRTRLEDPAMW ::::::::::::::::::::::::::::::::::::: CCDS53 RQRYGKRSSPETLISDLLMRESTENVPRTRLEDPAMW 70 80 90 >>CCDS32662.1 PYY gene_id:5697|Hs108|chr17 (97 aa) initn: 307 init1: 281 opt: 327 Z-score: 452.6 bits: 88.5 E(32554): 6.9e-19 Smith-Waterman score: 327; 54.1% identity (80.0% similar) in 85 aa overlap (13-97:13-97) 10 20 30 40 50 60 pF1KE1 MLGNKRLGLSGLTLALSLLVCLGALAEAYPSKPDNPGEDAPAEDMARYYSALRHYINLIT :. :.::::::::..::: ::. : ::: :.. :::..::::.::.: CCDS32 MVFVRRPWPALTTVLLALLVCLGALVDAYPIKPEAPREDASPEELNRYYASLRHYLNLVT 10 20 30 40 50 60 70 80 90 pF1KE1 RQRYGKRSSPETLISDLLMRESTENVPRTRLEDPAMW :::::::..:.::.: .. .. . :.: : : .: CCDS32 RQRYGKRDGPDTLLSKTFFPDGEDRPVRSRSEGPDLW 70 80 90 97 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 00:17:45 2016 done: Mon Nov 7 00:17:45 2016 Total Scan time: 1.610 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]