FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4405, 419 aa 1>>>pF1KE4405 419 - 419 aa - 419 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.6053+/-0.000353; mu= 12.1776+/- 0.022 mean_var=109.1422+/-21.255, 0's: 0 Z-trim(115.8): 69 B-trim: 0 in 0/54 Lambda= 0.122766 statistics sampled from 26503 (26572) to 26503 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.662), E-opt: 0.2 (0.312), width: 16 Scan time: 7.450 The best scores are: opt bits E(85289) NP_003209 (OMIM: 600951) telomeric repeat-binding ( 419) 2763 500.1 4.3e-141 XP_005251349 (OMIM: 600951) PREDICTED: telomeric r ( 449) 2145 390.6 4.1e-108 XP_016869281 (OMIM: 600951) PREDICTED: telomeric r ( 315) 2041 372.1 1.1e-102 XP_005251348 (OMIM: 600951) PREDICTED: telomeric r ( 469) 1965 358.8 1.7e-98 NP_059523 (OMIM: 600951) telomeric repeat-binding ( 439) 1963 358.4 2e-98 XP_011515884 (OMIM: 600951) PREDICTED: telomeric r ( 365) 1243 230.8 4.2e-60 XP_005256181 (OMIM: 602027) PREDICTED: telomeric r ( 464) 228 51.1 6.7e-06 XP_005256180 (OMIM: 602027) PREDICTED: telomeric r ( 541) 228 51.2 7.6e-06 NP_005643 (OMIM: 602027) telomeric repeat-binding ( 542) 228 51.2 7.7e-06 XP_005256179 (OMIM: 602027) PREDICTED: telomeric r ( 544) 228 51.2 7.7e-06 XP_005256178 (OMIM: 602027) PREDICTED: telomeric r ( 545) 228 51.2 7.7e-06 >>NP_003209 (OMIM: 600951) telomeric repeat-binding fact (419 aa) initn: 2763 init1: 2763 opt: 2763 Z-score: 2654.0 bits: 500.1 E(85289): 4.3e-141 Smith-Waterman score: 2763; 100.0% identity (100.0% similar) in 419 aa overlap (1-419:1-419) 10 20 30 40 50 60 pF1KE4 MAEDVSSAAPSPRGCADGRDADPTEEQMAETERNDEEQFECQELLECQVQVGAPEEEEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 MAEDVSSAAPSPRGCADGRDADPTEEQMAETERNDEEQFECQELLECQVQVGAPEEEEEE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 EEDAGLVAEAEAVAAGWMLDFLCLSLCRAFRDGRSEDFRRTRNSAEAIIHGLSSLTACQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 EEDAGLVAEAEAVAAGWMLDFLCLSLCRAFRDGRSEDFRRTRNSAEAIIHGLSSLTACQL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 RTIYICQFLTRIAAGKTLDAQFENDERITPLESALMIWGSIEKEHDKLHEEIQNLIKIQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 RTIYICQFLTRIAAGKTLDAQFENDERITPLESALMIWGSIEKEHDKLHEEIQNLIKIQA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 IAVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLMIISQKDTFHSFFQHFSYNHMMEKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 IAVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLMIISQKDTFHSFFQHFSYNHMMEKI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 KSYVNYVLSEKSSTFLMKAAAKVVESKRTRTITSQDKPSGNDVEMETEANLDTRKRSHKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 KSYVNYVLSEKSSTFLMKAAAKVVESKRTRTITSQDKPSGNDVEMETEANLDTRKRSHKN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 LFLSKLQHGTQQQDLNKKERRVGTPQSTKKKKESRRATESRIPVSKSQPVTPEKHRARKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 LFLSKLQHGTQQQDLNKKERRVGTPQSTKKKKESRRATESRIPVSKSQPVTPEKHRARKR 310 320 330 340 350 360 370 380 390 400 410 pF1KE4 QAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKKLKLISSDSED ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 QAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKKLKLISSDSED 370 380 390 400 410 >>XP_005251349 (OMIM: 600951) PREDICTED: telomeric repea (449 aa) initn: 2145 init1: 2145 opt: 2145 Z-score: 2062.0 bits: 390.6 E(85289): 4.1e-108 Smith-Waterman score: 2687; 93.1% identity (93.1% similar) in 449 aa overlap (1-419:1-449) 10 20 30 40 50 60 pF1KE4 MAEDVSSAAPSPRGCADGRDADPTEEQMAETERNDEEQFECQELLECQVQVGAPEEEEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MAEDVSSAAPSPRGCADGRDADPTEEQMAETERNDEEQFECQELLECQVQVGAPEEEEEE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 EEDAGLVAEAEAVAAGWMLDFLCLSLCRAFRDGRSEDFRRTRNSAEAIIHGLSSLTACQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 EEDAGLVAEAEAVAAGWMLDFLCLSLCRAFRDGRSEDFRRTRNSAEAIIHGLSSLTACQL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 RTIYICQFLTRIAAGKTLDAQFENDERITPLESALMIWGSIEKEHDKLHEEIQNLIKIQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 RTIYICQFLTRIAAGKTLDAQFENDERITPLESALMIWGSIEKEHDKLHEEIQNLIKIQA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 IAVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLMIISQKDTFHSFFQHFSYNHMMEKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 IAVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLMIISQKDTFHSFFQHFSYNHMMEKI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 KSYVNYVLSEKSSTFLMKAAAKVVESKRTRTITSQDKPSGNDVEMETEANLDTRKRSHKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 KSYVNYVLSEKSSTFLMKAAAKVVESKRTRTITSQDKPSGNDVEMETEANLDTRKRSHKN 250 260 270 280 290 300 310 320 330 pF1KE4 LFLSKLQHGTQQQDLNKKERRVGTPQ------------------------------STKK :::::::::::::::::::::::::: ::: XP_005 LFLSKLQHGTQQQDLNKKERRVGTPQITYICLTKLTMNKKEGVRKGLCFLVLLKHYRTKK 310 320 330 340 350 360 340 350 360 370 380 390 pF1KE4 KKESRRATESRIPVSKSQPVTPEKHRARKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 KKESRRATESRIPVSKSQPVTPEKHRARKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHY 370 380 390 400 410 420 400 410 pF1KE4 KFNNRTSVMLKDRWRTMKKLKLISSDSED ::::::::::::::::::::::::::::: XP_005 KFNNRTSVMLKDRWRTMKKLKLISSDSED 430 440 >>XP_016869281 (OMIM: 600951) PREDICTED: telomeric repea (315 aa) initn: 2041 init1: 2041 opt: 2041 Z-score: 1964.7 bits: 372.1 E(85289): 1.1e-102 Smith-Waterman score: 2041; 100.0% identity (100.0% similar) in 312 aa overlap (108-419:4-315) 80 90 100 110 120 130 pF1KE4 MLDFLCLSLCRAFRDGRSEDFRRTRNSAEAIIHGLSSLTACQLRTIYICQFLTRIAAGKT :::::::::::::::::::::::::::::: XP_016 MFTIIHGLSSLTACQLRTIYICQFLTRIAAGKT 10 20 30 140 150 160 170 180 190 pF1KE4 LDAQFENDERITPLESALMIWGSIEKEHDKLHEEIQNLIKIQAIAVCMENGNFKEAEEVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LDAQFENDERITPLESALMIWGSIEKEHDKLHEEIQNLIKIQAIAVCMENGNFKEAEEVF 40 50 60 70 80 90 200 210 220 230 240 250 pF1KE4 ERIFGDPNSHMPFKSKLLMIISQKDTFHSFFQHFSYNHMMEKIKSYVNYVLSEKSSTFLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ERIFGDPNSHMPFKSKLLMIISQKDTFHSFFQHFSYNHMMEKIKSYVNYVLSEKSSTFLM 100 110 120 130 140 150 260 270 280 290 300 310 pF1KE4 KAAAKVVESKRTRTITSQDKPSGNDVEMETEANLDTRKRSHKNLFLSKLQHGTQQQDLNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KAAAKVVESKRTRTITSQDKPSGNDVEMETEANLDTRKRSHKNLFLSKLQHGTQQQDLNK 160 170 180 190 200 210 320 330 340 350 360 370 pF1KE4 KERRVGTPQSTKKKKESRRATESRIPVSKSQPVTPEKHRARKRQAWLWEEDKNLRSGVRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KERRVGTPQSTKKKKESRRATESRIPVSKSQPVTPEKHRARKRQAWLWEEDKNLRSGVRK 220 230 240 250 260 270 380 390 400 410 pF1KE4 YGEGNWSKILLHYKFNNRTSVMLKDRWRTMKKLKLISSDSED :::::::::::::::::::::::::::::::::::::::::: XP_016 YGEGNWSKILLHYKFNNRTSVMLKDRWRTMKKLKLISSDSED 280 290 300 310 >>XP_005251348 (OMIM: 600951) PREDICTED: telomeric repea (469 aa) initn: 2537 init1: 1936 opt: 1965 Z-score: 1889.5 bits: 358.8 E(85289): 1.7e-98 Smith-Waterman score: 2518; 88.7% identity (88.7% similar) in 451 aa overlap (1-401:1-451) 10 20 30 40 50 60 pF1KE4 MAEDVSSAAPSPRGCADGRDADPTEEQMAETERNDEEQFECQELLECQVQVGAPEEEEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MAEDVSSAAPSPRGCADGRDADPTEEQMAETERNDEEQFECQELLECQVQVGAPEEEEEE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 EEDAGLVAEAEAVAAGWMLDFLCLSLCRAFRDGRSEDFRRTRNSAEAIIHGLSSLTACQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 EEDAGLVAEAEAVAAGWMLDFLCLSLCRAFRDGRSEDFRRTRNSAEAIIHGLSSLTACQL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 RTIYICQFLTRIAAGKTLDAQFENDERITPLESALMIWGSIEKEHDKLHEEIQNLIKIQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 RTIYICQFLTRIAAGKTLDAQFENDERITPLESALMIWGSIEKEHDKLHEEIQNLIKIQA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 IAVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLMIISQKDTFHSFFQHFSYNHMMEKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 IAVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLMIISQKDTFHSFFQHFSYNHMMEKI 190 200 210 220 230 240 250 260 270 280 290 pF1KE4 KSYVNYVLSEKSSTFLMKAAAKVVESKRTRTITSQDKPSGNDVEMETEANLDTRK----- ::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 KSYVNYVLSEKSSTFLMKAAAKVVESKRTRTITSQDKPSGNDVEMETEANLDTRKSVSDK 250 260 270 280 290 300 300 310 320 pF1KE4 ---------------RSHKNLFLSKLQHGTQQQDLNKKERRVGTPQ-------------- ::::::::::::::::::::::::::::::: XP_005 QSAVTESSEGTVSLLRSHKNLFLSKLQHGTQQQDLNKKERRVGTPQITYICLTKLTMNKK 310 320 330 340 350 360 330 340 350 360 370 pF1KE4 ----------------STKKKKESRRATESRIPVSKSQPVTPEKHRARKRQAWLWEEDKN ::::::::::::::::::::::::::::::::::::::::::: XP_005 EGVRKGLCFLVLLKHYRTKKKKESRRATESRIPVSKSQPVTPEKHRARKRQAWLWEEDKN 370 380 390 400 410 420 380 390 400 410 pF1KE4 LRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKKLKLISSDSED ::::::::::::::::::::::::::::::: XP_005 LRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKKLKLISSDSED 430 440 450 460 >>NP_059523 (OMIM: 600951) telomeric repeat-binding fact (439 aa) initn: 2749 init1: 1936 opt: 1963 Z-score: 1888.0 bits: 358.4 E(85289): 2e-98 Smith-Waterman score: 2713; 95.4% identity (95.4% similar) in 439 aa overlap (1-419:1-439) 10 20 30 40 50 60 pF1KE4 MAEDVSSAAPSPRGCADGRDADPTEEQMAETERNDEEQFECQELLECQVQVGAPEEEEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_059 MAEDVSSAAPSPRGCADGRDADPTEEQMAETERNDEEQFECQELLECQVQVGAPEEEEEE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 EEDAGLVAEAEAVAAGWMLDFLCLSLCRAFRDGRSEDFRRTRNSAEAIIHGLSSLTACQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_059 EEDAGLVAEAEAVAAGWMLDFLCLSLCRAFRDGRSEDFRRTRNSAEAIIHGLSSLTACQL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 RTIYICQFLTRIAAGKTLDAQFENDERITPLESALMIWGSIEKEHDKLHEEIQNLIKIQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_059 RTIYICQFLTRIAAGKTLDAQFENDERITPLESALMIWGSIEKEHDKLHEEIQNLIKIQA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 IAVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLMIISQKDTFHSFFQHFSYNHMMEKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_059 IAVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLMIISQKDTFHSFFQHFSYNHMMEKI 190 200 210 220 230 240 250 260 270 280 290 pF1KE4 KSYVNYVLSEKSSTFLMKAAAKVVESKRTRTITSQDKPSGNDVEMETEANLDTRK----- ::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_059 KSYVNYVLSEKSSTFLMKAAAKVVESKRTRTITSQDKPSGNDVEMETEANLDTRKSVSDK 250 260 270 280 290 300 300 310 320 330 340 pF1KE4 ---------------RSHKNLFLSKLQHGTQQQDLNKKERRVGTPQSTKKKKESRRATES ::::::::::::::::::::::::::::::::::::::::::::: NP_059 QSAVTESSEGTVSLLRSHKNLFLSKLQHGTQQQDLNKKERRVGTPQSTKKKKESRRATES 310 320 330 340 350 360 350 360 370 380 390 400 pF1KE4 RIPVSKSQPVTPEKHRARKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_059 RIPVSKSQPVTPEKHRARKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVML 370 380 390 400 410 420 410 pF1KE4 KDRWRTMKKLKLISSDSED ::::::::::::::::::: NP_059 KDRWRTMKKLKLISSDSED 430 >>XP_011515884 (OMIM: 600951) PREDICTED: telomeric repea (365 aa) initn: 1815 init1: 1214 opt: 1243 Z-score: 1199.9 bits: 230.8 E(85289): 4.2e-60 Smith-Waterman score: 1796; 85.2% identity (85.2% similar) in 344 aa overlap (108-401:4-347) 80 90 100 110 120 130 pF1KE4 MLDFLCLSLCRAFRDGRSEDFRRTRNSAEAIIHGLSSLTACQLRTIYICQFLTRIAAGKT :::::::::::::::::::::::::::::: XP_011 MFTIIHGLSSLTACQLRTIYICQFLTRIAAGKT 10 20 30 140 150 160 170 180 190 pF1KE4 LDAQFENDERITPLESALMIWGSIEKEHDKLHEEIQNLIKIQAIAVCMENGNFKEAEEVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LDAQFENDERITPLESALMIWGSIEKEHDKLHEEIQNLIKIQAIAVCMENGNFKEAEEVF 40 50 60 70 80 90 200 210 220 230 240 250 pF1KE4 ERIFGDPNSHMPFKSKLLMIISQKDTFHSFFQHFSYNHMMEKIKSYVNYVLSEKSSTFLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ERIFGDPNSHMPFKSKLLMIISQKDTFHSFFQHFSYNHMMEKIKSYVNYVLSEKSSTFLM 100 110 120 130 140 150 260 270 280 290 pF1KE4 KAAAKVVESKRTRTITSQDKPSGNDVEMETEANLDTRK--------------------RS :::::::::::::::::::::::::::::::::::::: :: XP_011 KAAAKVVESKRTRTITSQDKPSGNDVEMETEANLDTRKSVSDKQSAVTESSEGTVSLLRS 160 170 180 190 200 210 300 310 320 pF1KE4 HKNLFLSKLQHGTQQQDLNKKERRVGTPQ------------------------------S ::::::::::::::::::::::::::::: XP_011 HKNLFLSKLQHGTQQQDLNKKERRVGTPQITYICLTKLTMNKKEGVRKGLCFLVLLKHYR 220 230 240 250 260 270 330 340 350 360 370 380 pF1KE4 TKKKKESRRATESRIPVSKSQPVTPEKHRARKRQAWLWEEDKNLRSGVRKYGEGNWSKIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TKKKKESRRATESRIPVSKSQPVTPEKHRARKRQAWLWEEDKNLRSGVRKYGEGNWSKIL 280 290 300 310 320 330 390 400 410 pF1KE4 LHYKFNNRTSVMLKDRWRTMKKLKLISSDSED :::::::::::::: XP_011 LHYKFNNRTSVMLKDRWRTMKKLKLISSDSED 340 350 360 >>XP_005256181 (OMIM: 602027) PREDICTED: telomeric repea (464 aa) initn: 331 init1: 202 opt: 228 Z-score: 226.9 bits: 51.1 E(85289): 6.7e-06 Smith-Waterman score: 335; 26.1% identity (54.5% similar) in 387 aa overlap (61-412:82-463) 40 50 60 70 80 90 pF1KE4 TERNDEEQFECQELLECQVQVGAPEEEEEEEEDAGLVAEAEAVAAGWMLDFLCLSLCRAF :. :: . ::: :.: : ::: XP_005 GSGRAAGRRASRSSGRARRGRHEPGLGGPAERGAGEARLEEAVNR-WVLKFYFHEALRAF 60 70 80 90 100 110 100 110 120 130 140 pF1KE4 RDGRSEDFRRTRNSAEAI-IHGLSSLTACQLRTIYICQFLTRIAAGKTLDAQFENDERIT : .: :::. :. .:. .. :.. . . : . . : :.:: :..:: .:. . ..: XP_005 RGSRYGDFRQIRDIMQALLVRPLGKEHTVS-RLLRVMQCLSRIEEGENLDCSFDMEAELT 120 130 140 150 160 150 160 170 180 190 200 pF1KE4 PLESALMIWGSIEKEH---DKLHEEIQNLIK--IQAIAVCMENGNFKEAEEVFERIFGDP :::::. . :. : . . : ..:.: . :. :.. . ..: . : : XP_005 PLESAINVLEMIKTEFTLTEAVVESSRKLVKEAMAKKALKSESAASSTGKEDKQPAPG-P 170 180 190 200 210 220 210 220 230 240 250 260 pF1KE4 NSHMPFKSKLLMIISQKDTFHSFFQHFSYNHMMEKIKSYVNYV-LSEKSSTFLMKA--AA . : . .. . :. . . ... . : . .. :..:. .. .: :. XP_005 VEKPP-REPARQLRNPPTTIGMMTLKAAFKTLSGAQDSEAAFAKLDQKDLVLPTQALPAS 230 240 250 260 270 280 270 280 290 300 310 320 pF1KE4 KVVESKRTRTITSQDKPSGNDVEMETEANLDTRKRSHKNLFLSKLQHGTQQQ-DLNKKER ....:: : ... . : : .: . ... . . : : . ...:. . ::.... XP_005 PALKNKRPRK-DENESSAPADGEGGSELQPKNKRMTISRLVLEEDSQSTEPSAGLNSSQE 290 300 310 320 330 340 330 340 350 pF1KE4 RVGTPQST-----------------KKKKESRRATESR--------IPVSKSQPVTPEKH ...: : : : .: ..: . . .. : XP_005 AASAPPSKPTVLNQPLPGEKNPKVPKGKWNSSNGVEEKETWVEEDELFQVQAAPDEDSTT 350 360 370 380 390 400 360 370 380 390 400 410 pF1KE4 RARKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKKLKLISS :.: : ::.. ...::.:::::::. : .: : :::.::.::::::::.: . XP_005 NITKKQKWTVEESEWVKAGVQKYGEGNWAAISKNYPFVNRTAVMIKDRWRTMKRLGMN 410 420 430 440 450 460 pF1KE4 DSED >>XP_005256180 (OMIM: 602027) PREDICTED: telomeric repea (541 aa) initn: 403 init1: 202 opt: 228 Z-score: 225.9 bits: 51.2 E(85289): 7.6e-06 Smith-Waterman score: 384; 26.2% identity (51.9% similar) in 447 aa overlap (77-412:97-540) 50 60 70 80 90 100 pF1KE4 CQVQVGAPEEEEEEEEDAGLVAEAEAVAAGWMLDFLCLSLCRAFRDGRSEDFRRTRNSAE :.: : :::: .: :::. :. . XP_005 RARRGRHEPGLGGPAERGAGEARLEEAVNRWVLKFYFHEALRAFRGSRYGDFRQIRDIMQ 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE4 AI-IHGLSSLTACQLRTIYICQFLTRIAAGKTLDAQFENDERITPLESALMIWGSIEKEH :. .. :.. . . : . . : :.:: :..:: .:. . ..::::::. . :. : XP_005 ALLVRPLGKEHTVS-RLLRVMQCLSRIEEGENLDCSFDMEAELTPLESAINVLEMIKTEF 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE4 ---DKLHEEIQNLIKIQAIAVCMENGNFKEAEEVFER-IFGDPNSHMPFKSKLLMIISQK . . : ..:.: :. .:..: .:..: ..... . ::... ... :: :: .: XP_005 TLTEAVVESSRKLVKEAAVIICIKNKEFEKASKILKKHMSKDPTTQ-KLRNDLLNIIREK 190 200 210 220 230 240 230 240 250 260 270 pF1KE4 DTFHSFFQHFSYNHMMEKIKSYVNYVLSEKSSTFLMKAAAKVVESKRTRTITSQ-DK-PS . : .:.:::. ...:. ... :.. . .:. : :...:. . . :.. :: :. XP_005 NLAHPVIQNFSYETFQQKMLRFLESHLDD-AEPYLLTMAKKALKSESAASSTGKEDKQPA 250 260 270 280 290 300 280 290 300 310 pF1KE4 GNDVEME------------TEANLDTRKRSHKNLFLSKLQHGT----QQQDL-------- . :: : .. : : . :.: .. .... .:.:: XP_005 PGPVEKPPREPARQLRNPPTTIGMMTLKAAFKTLSGAQDSEAAFAKLDQKDLVLPTQALP 310 320 330 340 350 360 320 330 340 pF1KE4 ------NKKERRVGTPQS--------TKKKKESRRATESRI------------------- ::. :. . .: .. . ...: : ::. XP_005 ASPALKNKRPRKDENESSAPADGEGGSELQPKNKRMTISRLVLEEDSQSTEPSAGLNSSQ 370 380 390 400 410 420 350 pF1KE4 -----PVSK----SQPVTPEKH-------------------------------------- : :: .::. ::. XP_005 EAASAPPSKPTVLNQPLPGEKNPKVPKGKWNSSNGVEEKETWVEEDELFQVQAPDEDSTT 430 440 450 460 470 480 360 370 380 390 400 410 pF1KE4 RARKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKKLKLISS :.: : ::.. ...::.:::::::. : .: : :::.::.::::::::.: . XP_005 NITKKQKWTVEESEWVKAGVQKYGEGNWAAISKNYPFVNRTAVMIKDRWRTMKRLGMN 490 500 510 520 530 540 pF1KE4 DSED >>NP_005643 (OMIM: 602027) telomeric repeat-binding fact (542 aa) initn: 403 init1: 202 opt: 228 Z-score: 225.9 bits: 51.2 E(85289): 7.7e-06 Smith-Waterman score: 367; 26.0% identity (51.7% similar) in 447 aa overlap (78-412:98-541) 50 60 70 80 90 100 pF1KE4 QVQVGAPEEEEEEEEDAGLVAEAEAVAAGWMLDFLCLSLCRAFRDGRSEDFRRTRNSAEA .: : :::: .: :::. :. .: NP_005 ARRGRHEPGLGGPAERGAGEARLEEAVNRWVLKFYFHEALRAFRGSRYGDFRQIRDIMQA 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE4 I-IHGLSSLTACQLRTIYICQFLTRIAAGKTLDAQFENDERITPLESALMIWGSIEKEH- . .. :.. . . : . . : :.:: :..:: .:. . ..::::::. . :. : NP_005 LLVRPLGKEHTVS-RLLRVMQCLSRIEEGENLDCSFDMEAELTPLESAINVLEMIKTEFT 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE4 --DKLHEEIQNLIKIQAIAVCMENGNFKEAEEVFER-IFGDPNSHMPFKSKLLMIISQKD . . : ..:.: :. .:..: .:..: ..... . ::... ... :: :: .:. NP_005 LTEAVVESSRKLVKEAAVIICIKNKEFEKASKILKKHMSKDPTTQ-KLRNDLLNIIREKN 190 200 210 220 230 240 230 240 250 260 270 280 pF1KE4 TFHSFFQHFSYNHMMEKIKSYVNYVLSEKSSTFLMKAAAKVVESKRTRTITSQ-DK-PSG : .:.:::. ...:. ... :.. . .:. : :...:. . . :.. :: :. NP_005 LAHPVIQNFSYETFQQKMLRFLESHLDD-AEPYLLTMAKKALKSESAASSTGKEDKQPAP 250 260 270 280 290 300 290 300 310 pF1KE4 NDVEME------------TEANLDTRKRSHKNLFLSKLQHGT----QQQDL--------- . :: : .. : : . :.: .. .... .:.:: NP_005 GPVEKPPREPARQLRNPPTTIGMMTLKAAFKTLSGAQDSEAAFAKLDQKDLVLPTQALPA 310 320 330 340 350 360 320 330 340 pF1KE4 -----NKKERRVGTPQS--------TKKKKESRRATESRI-------------------- ::. :. . .: .. . ...: : ::. NP_005 SPALKNKRPRKDENESSAPADGEGGSELQPKNKRMTISRLVLEEDSQSTEPSAGLNSSQE 370 380 390 400 410 420 350 pF1KE4 ----PVSK----SQPVTPEKH--------------------------------------- : :: .::. ::. NP_005 AASAPPSKPTVLNQPLPGEKNPKVPKGKWNSSNGVEEKETWVEEDELFQVQAAPDEDSTT 430 440 450 460 470 480 360 370 380 390 400 410 pF1KE4 RARKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKKLKLISS :.: : ::.. ...::.:::::::. : .: : :::.::.::::::::.: . NP_005 NITKKQKWTVEESEWVKAGVQKYGEGNWAAISKNYPFVNRTAVMIKDRWRTMKRLGMN 490 500 510 520 530 540 pF1KE4 DSED >>XP_005256179 (OMIM: 602027) PREDICTED: telomeric repea (544 aa) initn: 390 init1: 202 opt: 228 Z-score: 225.9 bits: 51.2 E(85289): 7.7e-06 Smith-Waterman score: 354; 26.0% identity (50.6% similar) in 439 aa overlap (88-412:108-543) 60 70 80 90 100 110 pF1KE4 EEEEEDAGLVAEAEAVAAGWMLDFLCLSLCRAFRDGRSEDFRRTRNSAEAI-IHGLSSLT :::: .: :::. :. .:. .. :.. XP_005 GGPAERGAGEARLEEAVNRWVLKFYFHEALRAFRGSRYGDFRQIRDIMQALLVRPLGKEH 80 90 100 110 120 130 120 130 140 150 160 170 pF1KE4 ACQLRTIYICQFLTRIAAGKTLDAQFENDERITPLESALMIWGSIEKEH---DKLHEEIQ . . : . . : :.:: :..:: .:. . ..::::::. . :. : . . : . XP_005 TVS-RLLRVMQCLSRIEEGENLDCSFDMEAELTPLESAINVLEMIKTEFTLTEAVVESSR 140 150 160 170 180 190 180 190 200 210 220 230 pF1KE4 NLIKIQAIAVCMENGNFKEAEEVFER-IFGDPNSHMPFKSKLLMIISQKDTFHSFFQHFS .:.: :. .:..: .:..: ..... . ::... ... :: :: .:. : .:.:: XP_005 KLVKEAAVIICIKNKEFEKASKILKKHMSKDPTTQ-KLRNDLLNIIREKNLAHPVIQNFS 200 210 220 230 240 250 240 250 260 270 280 pF1KE4 YNHMMEKIKSYVNYVLSEK-----SSTFLMKAAAKVVESKRTRTITSQDKPSGNDVEME- :. ...:. ... :.. . :. : : : :: . : . .:. . :: XP_005 YETFQQKMLRFLESHLDDAEPYLLTIGFMAKKALKS-ESAASSTGKEDKQPAPGPVEKPP 260 270 280 290 300 310 290 300 310 pF1KE4 -----------TEANLDTRKRSHKNLFLSKLQHGT----QQQDL--------------NK : .. : : . :.: .. .... .:.:: :: XP_005 REPARQLRNPPTTIGMMTLKAAFKTLSGAQDSEAAFAKLDQKDLVLPTQALPASPALKNK 320 330 340 350 360 370 320 330 340 pF1KE4 KERRVGTPQS--------TKKKKESRRATESRI------------------------PVS . :. . .: .. . ...: : ::. : : XP_005 RPRKDENESSAPADGEGGSELQPKNKRMTISRLVLEEDSQSTEPSAGLNSSQEAASAPPS 380 390 400 410 420 430 350 360 pF1KE4 K----SQPVTPEKH--------------------------------------RARKRQAW : .::. ::. :.: : XP_005 KPTVLNQPLPGEKNPKVPKGKWNSSNGVEEKETWVEEDELFQVQAPDEDSTTNITKKQKW 440 450 460 470 480 490 370 380 390 400 410 pF1KE4 LWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKKLKLISSDSED ::.. ...::.:::::::. : .: : :::.::.::::::::.: . XP_005 TVEESEWVKAGVQKYGEGNWAAISKNYPFVNRTAVMIKDRWRTMKRLGMN 500 510 520 530 540 419 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 01:19:50 2016 done: Sun Nov 6 01:19:51 2016 Total Scan time: 7.450 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]