FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6338, 313 aa 1>>>pF1KE6338 313 - 313 aa - 313 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6709+/-0.000897; mu= 13.3460+/- 0.054 mean_var=68.6803+/-13.383, 0's: 0 Z-trim(105.9): 16 B-trim: 0 in 0/50 Lambda= 0.154760 statistics sampled from 8694 (8699) to 8694 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.656), E-opt: 0.2 (0.267), width: 16 Scan time: 2.320 The best scores are: opt bits E(32554) CCDS11028.1 ASPA gene_id:443|Hs108|chr17 ( 313) 2146 488.2 3.5e-138 CCDS8175.1 ACY3 gene_id:91703|Hs108|chr11 ( 319) 981 228.1 7.1e-60 >>CCDS11028.1 ASPA gene_id:443|Hs108|chr17 (313 aa) initn: 2146 init1: 2146 opt: 2146 Z-score: 2594.4 bits: 488.2 E(32554): 3.5e-138 Smith-Waterman score: 2146; 100.0% identity (100.0% similar) in 313 aa overlap (1-313:1-313) 10 20 30 40 50 60 pF1KE6 MTSCHIAEEHIQKVAIFGGTHGNELTGVFLVKHWLENGAEIQRTGLEVKPFITNPRAVKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MTSCHIAEEHIQKVAIFGGTHGNELTGVFLVKHWLENGAEIQRTGLEVKPFITNPRAVKK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 CTRYIDCDLNRIFDLENLGKKMSEDLPYEVRRAQEINHLFGPKDSEDSYDIIFDLHNTTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 CTRYIDCDLNRIFDLENLGKKMSEDLPYEVRRAQEINHLFGPKDSEDSYDIIFDLHNTTS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 NMGCTLILEDSRNNFLIQMFHYIKTSLAPLPCYVYLIEHPSLKYATTRSIAKYPVGIEVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 NMGCTLILEDSRNNFLIQMFHYIKTSLAPLPCYVYLIEHPSLKYATTRSIAKYPVGIEVG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 PQPQGVLRADILDQMRKMIKHALDFIHHFNEGKEFPPCAIEVYKIIEKVDYPRDENGEIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 PQPQGVLRADILDQMRKMIKHALDFIHHFNEGKEFPPCAIEVYKIIEKVDYPRDENGEIA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 AIIHPNLQDQDWKPLHPGDPMFLTLDGKTIPLGGDCTVYPVFVNEAAYYEKKEAFAKTTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 AIIHPNLQDQDWKPLHPGDPMFLTLDGKTIPLGGDCTVYPVFVNEAAYYEKKEAFAKTTK 250 260 270 280 290 300 310 pF1KE6 LTLNAKSIRCCLH ::::::::::::: CCDS11 LTLNAKSIRCCLH 310 >>CCDS8175.1 ACY3 gene_id:91703|Hs108|chr11 (319 aa) initn: 980 init1: 961 opt: 981 Z-score: 1188.5 bits: 228.1 E(32554): 7.1e-60 Smith-Waterman score: 981; 44.8% identity (76.0% similar) in 308 aa overlap (1-308:1-308) 10 20 30 40 50 60 pF1KE6 MTSCHIAEEHIQKVAIFGGTHGNELTGVFLVKHWLENGAEIQRTGLEVKPFITNPRAVKK : : . .: ...::. :::::::..::.:..:::. ::.::... . : ..:: :.. CCDS81 MCSLPVPREPLRRVAVTGGTHGNEMSGVYLARHWLHAPAELQRASFSAVPVLANPAATSG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 CTRYIDCDLNRIFDLENLGKKMSEDLPYEVRRAQEINHLFGPKDSEDSYDIIFDLHNTTS : ::.: :::: : :... . : :::: ::.:.:.:.::: : ...:...::::::. CCDS81 CRRYVDHDLNRTFTSSFLNSRPTPDDPYEVTRARELNQLLGPKASGQAFDFVLDLHNTTA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 NMGCTLILEDSRNNFLIQMFHYIKTSLAPLPCYVYLIEHPSLKYATTRSIAKYPVGIEVG ::: :: ..:.. : ... .... . : : :.: .. . . . :.:: .:.:.: CCDS81 NMGTCLIAKSSHEVFAMHLCRHLQLQYPELSCQVFLYQRSGEESYNLDSVAKNGLGLELG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 PQPQGVLRADILDQMRKMIKHALDFIHHFNEGKEFPPCAIEVYKIIEKVDYPRDENGEIA :::::::::::...:: .. .::::. ::.: :: .:.:. . ::.:: : :..: CCDS81 PQPQGVLRADIFSRMRTLVATVLDFIELFNQGTAFPAFEMEAYRPVGVVDFPRTEAGHLA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 AIIHPNLQDQDWKPLHPGDPMFLTLDGKTIPLGGDCTVYPVFVNEAAYYEKKEAFAKTTK . .::.:::.:..::.:: :.: ..:. . :. ::::::.:::::::: ::..: : CCDS81 GTVHPQLQDRDFQPLQPGAPIFQMFSGEDLLYEGESTVYPVFINEAAYYEKGVAFVQTEK 250 260 270 280 290 300 310 pF1KE6 LTLNAKSIRCCLH .:... .. CCDS81 FTFTVPAMPALTPAPSPAS 310 313 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 12:14:53 2016 done: Tue Nov 8 12:14:53 2016 Total Scan time: 2.320 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]