FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3916, 468 aa 1>>>pF1KE3916 468 - 468 aa - 468 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.8701+/-0.000389; mu= 15.5553+/- 0.024 mean_var=82.2076+/-16.953, 0's: 0 Z-trim(113.0): 239 B-trim: 817 in 1/52 Lambda= 0.141455 statistics sampled from 21968 (22210) to 21968 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.619), E-opt: 0.2 (0.26), width: 16 Scan time: 8.360 The best scores are: opt bits E(85289) NP_001254501 (OMIM: 609871) TBC1 domain family mem ( 468) 3094 641.4 1.6e-183 XP_011517145 (OMIM: 609871) PREDICTED: TBC1 domain ( 468) 3094 641.4 1.6e-183 XP_016870388 (OMIM: 609871) PREDICTED: TBC1 domain ( 483) 3094 641.4 1.6e-183 NP_001254500 (OMIM: 609871) TBC1 domain family mem ( 928) 3094 641.6 2.8e-183 NP_060891 (OMIM: 609871) TBC1 domain family member ( 917) 2406 501.1 5e-141 XP_005261631 (OMIM: 610440) PREDICTED: small G pro ( 739) 659 144.6 8.9e-34 NP_056520 (OMIM: 610440) small G protein signaling ( 749) 659 144.6 9e-34 XP_005261630 (OMIM: 610440) PREDICTED: small G pro ( 756) 659 144.6 9.1e-34 XP_005261629 (OMIM: 610440) PREDICTED: small G pro ( 766) 659 144.6 9.2e-34 NP_001288778 (OMIM: 610440) small G protein signal ( 660) 652 143.1 2.2e-33 XP_016884266 (OMIM: 610440) PREDICTED: small G pro ( 672) 652 143.1 2.2e-33 XP_016884265 (OMIM: 610440) PREDICTED: small G pro ( 682) 652 143.1 2.2e-33 XP_016884264 (OMIM: 610440) PREDICTED: small G pro ( 686) 652 143.1 2.3e-33 XP_011528464 (OMIM: 610440) PREDICTED: small G pro ( 686) 652 143.1 2.3e-33 XP_005261632 (OMIM: 610440) PREDICTED: small G pro ( 699) 652 143.1 2.3e-33 XP_011528461 (OMIM: 610440) PREDICTED: small G pro ( 703) 652 143.1 2.3e-33 XP_011528462 (OMIM: 610440) PREDICTED: small G pro ( 703) 652 143.1 2.3e-33 XP_016884269 (OMIM: 610440) PREDICTED: small G pro ( 583) 524 117.0 1.4e-25 XP_016884268 (OMIM: 610440) PREDICTED: small G pro ( 600) 524 117.0 1.5e-25 XP_011528463 (OMIM: 610440) PREDICTED: small G pro ( 600) 524 117.0 1.5e-25 NP_001191169 (OMIM: 610020) TBC1 domain family mem ( 515) 469 105.7 3.1e-22 NP_114143 (OMIM: 610020) TBC1 domain family member ( 508) 461 104.1 9.5e-22 NP_940919 (OMIM: 610831) carabin isoform 1 [Homo s ( 446) 450 101.8 4e-21 XP_006718603 (OMIM: 610831) PREDICTED: carabin iso ( 446) 450 101.8 4e-21 XP_006718602 (OMIM: 610831) PREDICTED: carabin iso ( 446) 450 101.8 4e-21 XP_006718601 (OMIM: 610831) PREDICTED: carabin iso ( 446) 450 101.8 4e-21 NP_056342 (OMIM: 613620) TBC1 domain family member ( 808) 436 99.1 4.8e-20 XP_011528460 (OMIM: 610440) PREDICTED: small G pro ( 718) 433 98.4 6.6e-20 XP_016884267 (OMIM: 610440) PREDICTED: small G pro ( 651) 432 98.2 7.1e-20 XP_011543304 (OMIM: 610831) PREDICTED: carabin iso ( 313) 418 95.2 2.8e-19 XP_011511972 (OMIM: 609850) PREDICTED: TBC1 domain ( 494) 374 86.3 2.1e-16 XP_006714064 (OMIM: 609850) PREDICTED: TBC1 domain ( 546) 374 86.3 2.2e-16 XP_016857774 (OMIM: 602942) PREDICTED: ecotropic v ( 741) 375 86.6 2.5e-16 XP_016857773 (OMIM: 602942) PREDICTED: ecotropic v ( 777) 375 86.6 2.6e-16 XP_016857772 (OMIM: 602942) PREDICTED: ecotropic v ( 785) 375 86.6 2.6e-16 NP_005656 (OMIM: 602942) ecotropic viral integrati ( 810) 375 86.6 2.7e-16 XP_016857770 (OMIM: 602942) PREDICTED: ecotropic v ( 818) 375 86.6 2.7e-16 NP_001295177 (OMIM: 602942) ecotropic viral integr ( 821) 375 86.6 2.7e-16 XP_016857769 (OMIM: 602942) PREDICTED: ecotropic v ( 826) 375 86.6 2.7e-16 XP_016872462 (OMIM: 605405) PREDICTED: USP6 N-term ( 851) 375 86.6 2.8e-16 XP_016857766 (OMIM: 602942) PREDICTED: ecotropic v ( 854) 375 86.7 2.8e-16 XP_016857765 (OMIM: 602942) PREDICTED: ecotropic v ( 859) 375 86.7 2.8e-16 XP_016857760 (OMIM: 602942) PREDICTED: ecotropic v ( 903) 375 86.7 2.9e-16 XP_016858483 (OMIM: 609238) PREDICTED: rab GTPase- ( 778) 373 86.2 3.4e-16 NP_055672 (OMIM: 609238) rab GTPase-activating pro ( 815) 373 86.2 3.6e-16 NP_055503 (OMIM: 605405) USP6 N-terminal-like prot ( 828) 373 86.2 3.6e-16 XP_006711756 (OMIM: 609238) PREDICTED: rab GTPase- ( 985) 374 86.5 3.6e-16 NP_001073960 (OMIM: 605405) USP6 N-terminal-like p ( 845) 373 86.2 3.7e-16 XP_016872460 (OMIM: 605405) PREDICTED: USP6 N-term ( 846) 373 86.2 3.7e-16 XP_005245738 (OMIM: 609238) PREDICTED: rab GTPase- (1014) 374 86.5 3.7e-16 >>NP_001254501 (OMIM: 609871) TBC1 domain family member (468 aa) initn: 3094 init1: 3094 opt: 3094 Z-score: 3416.0 bits: 641.4 E(85289): 1.6e-183 Smith-Waterman score: 3094; 100.0% identity (100.0% similar) in 468 aa overlap (1-468:1-468) 10 20 30 40 50 60 pF1KE3 MEAYRTQNCFLNSEIHQVTKIWRKVAEKEKALLTKCAYLQARNCQVESKYLAGLRRLQEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MEAYRTQNCFLNSEIHQVTKIWRKVAEKEKALLTKCAYLQARNCQVESKYLAGLRRLQEA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 LGDEASECSELLRQLVQEALQWEAGEASSDSIELSPISKYDEYGFLTVPDYEVEDLKLLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LGDEASECSELLRQLVQEALQWEAGEASSDSIELSPISKYDEYGFLTVPDYEVEDLKLLA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 KIQALESRSHHLLGLEAVDRPLRERWAALGDLVPSAELKQLLRAGVPREHRPRVWRWLVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KIQALESRSHHLLGLEAVDRPLRERWAALGDLVPSAELKQLLRAGVPREHRPRVWRWLVH 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 LRVQHLHTPGCYQELLSRGQAREHPAARQIELDLNRTFPNNKHFTCPTSSFPDKLRRVLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LRVQHLHTPGCYQELLSRGQAREHPAARQIELDLNRTFPNNKHFTCPTSSFPDKLRRVLL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 AFSWQNPTIGYCQGLNRLAAIALLVLEEEESAFWCLVAIVETIMPADYYCNTLTASQVDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AFSWQNPTIGYCQGLNRLAAIALLVLEEEESAFWCLVAIVETIMPADYYCNTLTASQVDQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 RVLQDLLSEKLPRLMAHLGQHHVDLSLVTFNWFLVVFADSLISNILLRVWDAFLYEGTKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RVLQDLLSEKLPRLMAHLGQHHVDLSLVTFNWFLVVFADSLISNILLRVWDAFLYEGTKV 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 VFRYALAIFKYNEKEILRLQNGLEIYQYLRFFTKTISNSRKLMNIAFNDMNPFRMKQLRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VFRYALAIFKYNEKEILRLQNGLEIYQYLRFFTKTISNSRKLMNIAFNDMNPFRMKQLRQ 370 380 390 400 410 420 430 440 450 460 pF1KE3 LRMVHRERLEAELRELEQLKAEYLERRASRRRAVSEGCASEDEVEGEA :::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LRMVHRERLEAELRELEQLKAEYLERRASRRRAVSEGCASEDEVEGEA 430 440 450 460 >>XP_011517145 (OMIM: 609871) PREDICTED: TBC1 domain fam (468 aa) initn: 3094 init1: 3094 opt: 3094 Z-score: 3416.0 bits: 641.4 E(85289): 1.6e-183 Smith-Waterman score: 3094; 100.0% identity (100.0% similar) in 468 aa overlap (1-468:1-468) 10 20 30 40 50 60 pF1KE3 MEAYRTQNCFLNSEIHQVTKIWRKVAEKEKALLTKCAYLQARNCQVESKYLAGLRRLQEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MEAYRTQNCFLNSEIHQVTKIWRKVAEKEKALLTKCAYLQARNCQVESKYLAGLRRLQEA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 LGDEASECSELLRQLVQEALQWEAGEASSDSIELSPISKYDEYGFLTVPDYEVEDLKLLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LGDEASECSELLRQLVQEALQWEAGEASSDSIELSPISKYDEYGFLTVPDYEVEDLKLLA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 KIQALESRSHHLLGLEAVDRPLRERWAALGDLVPSAELKQLLRAGVPREHRPRVWRWLVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KIQALESRSHHLLGLEAVDRPLRERWAALGDLVPSAELKQLLRAGVPREHRPRVWRWLVH 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 LRVQHLHTPGCYQELLSRGQAREHPAARQIELDLNRTFPNNKHFTCPTSSFPDKLRRVLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LRVQHLHTPGCYQELLSRGQAREHPAARQIELDLNRTFPNNKHFTCPTSSFPDKLRRVLL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 AFSWQNPTIGYCQGLNRLAAIALLVLEEEESAFWCLVAIVETIMPADYYCNTLTASQVDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AFSWQNPTIGYCQGLNRLAAIALLVLEEEESAFWCLVAIVETIMPADYYCNTLTASQVDQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 RVLQDLLSEKLPRLMAHLGQHHVDLSLVTFNWFLVVFADSLISNILLRVWDAFLYEGTKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RVLQDLLSEKLPRLMAHLGQHHVDLSLVTFNWFLVVFADSLISNILLRVWDAFLYEGTKV 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 VFRYALAIFKYNEKEILRLQNGLEIYQYLRFFTKTISNSRKLMNIAFNDMNPFRMKQLRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VFRYALAIFKYNEKEILRLQNGLEIYQYLRFFTKTISNSRKLMNIAFNDMNPFRMKQLRQ 370 380 390 400 410 420 430 440 450 460 pF1KE3 LRMVHRERLEAELRELEQLKAEYLERRASRRRAVSEGCASEDEVEGEA :::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LRMVHRERLEAELRELEQLKAEYLERRASRRRAVSEGCASEDEVEGEA 430 440 450 460 >>XP_016870388 (OMIM: 609871) PREDICTED: TBC1 domain fam (483 aa) initn: 3094 init1: 3094 opt: 3094 Z-score: 3415.8 bits: 641.4 E(85289): 1.6e-183 Smith-Waterman score: 3094; 100.0% identity (100.0% similar) in 468 aa overlap (1-468:16-483) 10 20 30 40 pF1KE3 MEAYRTQNCFLNSEIHQVTKIWRKVAEKEKALLTKCAYLQARNCQ ::::::::::::::::::::::::::::::::::::::::::::: XP_016 MSAVCSEPRRALKDDMEAYRTQNCFLNSEIHQVTKIWRKVAEKEKALLTKCAYLQARNCQ 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE3 VESKYLAGLRRLQEALGDEASECSELLRQLVQEALQWEAGEASSDSIELSPISKYDEYGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VESKYLAGLRRLQEALGDEASECSELLRQLVQEALQWEAGEASSDSIELSPISKYDEYGF 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE3 LTVPDYEVEDLKLLAKIQALESRSHHLLGLEAVDRPLRERWAALGDLVPSAELKQLLRAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LTVPDYEVEDLKLLAKIQALESRSHHLLGLEAVDRPLRERWAALGDLVPSAELKQLLRAG 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE3 VPREHRPRVWRWLVHLRVQHLHTPGCYQELLSRGQAREHPAARQIELDLNRTFPNNKHFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VPREHRPRVWRWLVHLRVQHLHTPGCYQELLSRGQAREHPAARQIELDLNRTFPNNKHFT 190 200 210 220 230 240 230 240 250 260 270 280 pF1KE3 CPTSSFPDKLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLEEEESAFWCLVAIVETIMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 CPTSSFPDKLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLEEEESAFWCLVAIVETIMP 250 260 270 280 290 300 290 300 310 320 330 340 pF1KE3 ADYYCNTLTASQVDQRVLQDLLSEKLPRLMAHLGQHHVDLSLVTFNWFLVVFADSLISNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ADYYCNTLTASQVDQRVLQDLLSEKLPRLMAHLGQHHVDLSLVTFNWFLVVFADSLISNI 310 320 330 340 350 360 350 360 370 380 390 400 pF1KE3 LLRVWDAFLYEGTKVVFRYALAIFKYNEKEILRLQNGLEIYQYLRFFTKTISNSRKLMNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LLRVWDAFLYEGTKVVFRYALAIFKYNEKEILRLQNGLEIYQYLRFFTKTISNSRKLMNI 370 380 390 400 410 420 410 420 430 440 450 460 pF1KE3 AFNDMNPFRMKQLRQLRMVHRERLEAELRELEQLKAEYLERRASRRRAVSEGCASEDEVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AFNDMNPFRMKQLRQLRMVHRERLEAELRELEQLKAEYLERRASRRRAVSEGCASEDEVE 430 440 450 460 470 480 pF1KE3 GEA ::: XP_016 GEA >>NP_001254500 (OMIM: 609871) TBC1 domain family member (928 aa) initn: 3094 init1: 3094 opt: 3094 Z-score: 3411.5 bits: 641.6 E(85289): 2.8e-183 Smith-Waterman score: 3094; 100.0% identity (100.0% similar) in 468 aa overlap (1-468:461-928) 10 20 30 pF1KE3 MEAYRTQNCFLNSEIHQVTKIWRKVAEKEK :::::::::::::::::::::::::::::: NP_001 HPPDQSPLRPDAANRDFLSQQGKIEHLKDDMEAYRTQNCFLNSEIHQVTKIWRKVAEKEK 440 450 460 470 480 490 40 50 60 70 80 90 pF1KE3 ALLTKCAYLQARNCQVESKYLAGLRRLQEALGDEASECSELLRQLVQEALQWEAGEASSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ALLTKCAYLQARNCQVESKYLAGLRRLQEALGDEASECSELLRQLVQEALQWEAGEASSD 500 510 520 530 540 550 100 110 120 130 140 150 pF1KE3 SIELSPISKYDEYGFLTVPDYEVEDLKLLAKIQALESRSHHLLGLEAVDRPLRERWAALG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SIELSPISKYDEYGFLTVPDYEVEDLKLLAKIQALESRSHHLLGLEAVDRPLRERWAALG 560 570 580 590 600 610 160 170 180 190 200 210 pF1KE3 DLVPSAELKQLLRAGVPREHRPRVWRWLVHLRVQHLHTPGCYQELLSRGQAREHPAARQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DLVPSAELKQLLRAGVPREHRPRVWRWLVHLRVQHLHTPGCYQELLSRGQAREHPAARQI 620 630 640 650 660 670 220 230 240 250 260 270 pF1KE3 ELDLNRTFPNNKHFTCPTSSFPDKLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLEEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ELDLNRTFPNNKHFTCPTSSFPDKLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLEEEE 680 690 700 710 720 730 280 290 300 310 320 330 pF1KE3 SAFWCLVAIVETIMPADYYCNTLTASQVDQRVLQDLLSEKLPRLMAHLGQHHVDLSLVTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SAFWCLVAIVETIMPADYYCNTLTASQVDQRVLQDLLSEKLPRLMAHLGQHHVDLSLVTF 740 750 760 770 780 790 340 350 360 370 380 390 pF1KE3 NWFLVVFADSLISNILLRVWDAFLYEGTKVVFRYALAIFKYNEKEILRLQNGLEIYQYLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NWFLVVFADSLISNILLRVWDAFLYEGTKVVFRYALAIFKYNEKEILRLQNGLEIYQYLR 800 810 820 830 840 850 400 410 420 430 440 450 pF1KE3 FFTKTISNSRKLMNIAFNDMNPFRMKQLRQLRMVHRERLEAELRELEQLKAEYLERRASR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FFTKTISNSRKLMNIAFNDMNPFRMKQLRQLRMVHRERLEAELRELEQLKAEYLERRASR 860 870 880 890 900 910 460 pF1KE3 RRAVSEGCASEDEVEGEA :::::::::::::::::: NP_001 RRAVSEGCASEDEVEGEA 920 >>NP_060891 (OMIM: 609871) TBC1 domain family member 2A (917 aa) initn: 2402 init1: 2402 opt: 2406 Z-score: 2652.8 bits: 501.1 E(85289): 5e-141 Smith-Waterman score: 2995; 97.6% identity (97.6% similar) in 468 aa overlap (1-468:461-917) 10 20 30 pF1KE3 MEAYRTQNCFLNSEIHQVTKIWRKVAEKEK :::::::::::::::::::::::::::::: NP_060 HPPDQSPLRPDAANRDFLSQQGKIEHLKDDMEAYRTQNCFLNSEIHQVTKIWRKVAEKEK 440 450 460 470 480 490 40 50 60 70 80 90 pF1KE3 ALLTKCAYLQARNCQVESKYLAGLRRLQEALGDEASECSELLRQLVQEALQWEAGEASSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 ALLTKCAYLQARNCQVESKYLAGLRRLQEALGDEASECSELLRQLVQEALQWEAGEASSD 500 510 520 530 540 550 100 110 120 130 140 150 pF1KE3 SIELSPISKYDEYGFLTVPDYEVEDLKLLAKIQALESRSHHLLGLEAVDRPLRERWAALG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 SIELSPISKYDEYGFLTVPDYEVEDLKLLAKIQALESRSHHLLGLEAVDRPLRERWAALG 560 570 580 590 600 610 160 170 180 190 200 210 pF1KE3 DLVPSAELKQLLRAGVPREHRPRVWRWLVHLRVQHLHTPGCYQELLSRGQAREHPAARQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 DLVPSAELKQLLRAGVPREHRPRVWRWLVHLRVQHLHTPGCYQELLSRGQAREHPAARQI 620 630 640 650 660 670 220 230 240 250 260 270 pF1KE3 ELDLNRTFPNNKHFTCPTSSFPDKLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLEEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 ELDLNRTFPNNKHFTCPTSSFPDKLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLEEEE 680 690 700 710 720 730 280 290 300 310 320 330 pF1KE3 SAFWCLVAIVETIMPADYYCNTLTASQVDQRVLQDLLSEKLPRLMAHLGQHHVDLSLVTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 SAFWCLVAIVETIMPADYYCNTLTASQVDQRVLQDLLSEKLPRLMAHLGQHHVDLSLVTF 740 750 760 770 780 790 340 350 360 370 380 390 pF1KE3 NWFLVVFADSLISNILLRVWDAFLYEGTKVVFRYALAIFKYNEKEILRLQNGLEIYQYLR ::::::::::::::::::::::::::::: :::::::::::::::::::: NP_060 NWFLVVFADSLISNILLRVWDAFLYEGTK-----------YNEKEILRLQNGLEIYQYLR 800 810 820 830 400 410 420 430 440 450 pF1KE3 FFTKTISNSRKLMNIAFNDMNPFRMKQLRQLRMVHRERLEAELRELEQLKAEYLERRASR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 FFTKTISNSRKLMNIAFNDMNPFRMKQLRQLRMVHRERLEAELRELEQLKAEYLERRASR 840 850 860 870 880 890 460 pF1KE3 RRAVSEGCASEDEVEGEA :::::::::::::::::: NP_060 RRAVSEGCASEDEVEGEA 900 910 >>XP_005261631 (OMIM: 610440) PREDICTED: small G protein (739 aa) initn: 479 init1: 403 opt: 659 Z-score: 727.4 bits: 144.6 E(85289): 8.9e-34 Smith-Waterman score: 663; 33.3% identity (61.0% similar) in 415 aa overlap (77-465:22-419) 50 60 70 80 90 100 pF1KE3 ESKYLAGLRRLQEALGDEASECSELLRQLVQEAL-QWEAGEASSDSIELSPISKYDEYGF :: : .. : :... :. :::.:: XP_005 MSGSHTPACGPFSALTPSIWPQEILAKYTQKEESAEQPEFY----YDEFGF 10 20 30 40 110 120 130 140 150 pF1KE3 LTVPDYEVED-LKLLAKIQALESRSHHLLGLEAVDRPLRERWAA---------LGDL--- . . : .:::. .: : : : :: : .::: XP_005 RVYKEEGDEPGSSLLANSPLME------------DAPQRLRWQAHLEFTHNHDVGDLTWD 50 60 70 80 90 160 170 180 190 200 pF1KE3 -----VPSAE-LKQLLRAGVPREHRPRVWRWLVHLRVQHLHTPGCYQELLSRGQAREHPA .: .: :..:. ::.:. ::..: : .. .. :.:... .. : : XP_005 KIAVSLPRSEKLRSLVLAGIPHGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIA 100 110 120 130 140 150 210 220 230 240 250 260 pF1KE3 ARQIELDLNRTFPNNKHFTCPTSSFPDKLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVL :.::: :: ::.:.: :. : .::::: :..: : :::::: . .:: :: : XP_005 AKQIEKDLLRTMPSNACFASMGSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFL 160 170 180 190 200 210 270 280 290 300 310 320 pF1KE3 EEEESAFWCLVAIVETIMPADYYCNTLTASQVDQRVLQDLLSEKLPRLMAHLGQHHVDLS :::. ::: . ::.: ..::.:. .:: . :.:::::. :. . :::: : .: ..:: XP_005 EEED-AFWMMSAIIEDLLPASYFSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELS 220 230 240 250 260 270 330 340 350 360 370 380 pF1KE3 LVTFNWFLVVFADSLISNILLRVWDAFLYEGTKVVFRYALAIFKYNEKEILRLQNGLEIY :.:..:::..::. . ..:::.:: :.:::..:.:. .:.... .:.:... .:. :. XP_005 LITLHWFLTAFASVVDIKLLLRIWDLFFYEGSRVLFQLTLGMLHLKEEELIQSENSASIF 280 290 300 310 320 330 390 400 410 420 430 440 pF1KE3 QYLRFFTKTISNSRKLMNIAFNDMNPFRMKQLRQLRMVHRERLEAELRELEQLK-----A . : . . . ... :...:. . . .. : : : :. .: . XP_005 NTLSDIPSQMEDAELLLGVAMRLAGSLTDVAVETQRRKHLAYLIADQGQLLGAGTLTNLS 340 350 360 370 380 390 450 460 pF1KE3 EYLERRASRRRA-VSEGCASEDEVEGEA . ..::..::.. .. .::..: XP_005 QVVRRRTQRRKSTITALLFGEDDLEALKAKNIKQTELVADLREAILRVARHFQCTDPKNC 400 410 420 430 440 450 >>NP_056520 (OMIM: 610440) small G protein signaling mod (749 aa) initn: 479 init1: 403 opt: 659 Z-score: 727.3 bits: 144.6 E(85289): 9e-34 Smith-Waterman score: 663; 33.3% identity (61.0% similar) in 415 aa overlap (77-465:22-419) 50 60 70 80 90 100 pF1KE3 ESKYLAGLRRLQEALGDEASECSELLRQLVQEAL-QWEAGEASSDSIELSPISKYDEYGF :: : .. : :... :. :::.:: NP_056 MSGSHTPACGPFSALTPSIWPQEILAKYTQKEESAEQPEFY----YDEFGF 10 20 30 40 110 120 130 140 150 pF1KE3 LTVPDYEVED-LKLLAKIQALESRSHHLLGLEAVDRPLRERWAA---------LGDL--- . . : .:::. .: : : : :: : .::: NP_056 RVYKEEGDEPGSSLLANSPLME------------DAPQRLRWQAHLEFTHNHDVGDLTWD 50 60 70 80 90 160 170 180 190 200 pF1KE3 -----VPSAE-LKQLLRAGVPREHRPRVWRWLVHLRVQHLHTPGCYQELLSRGQAREHPA .: .: :..:. ::.:. ::..: : .. .. :.:... .. : : NP_056 KIAVSLPRSEKLRSLVLAGIPHGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIA 100 110 120 130 140 150 210 220 230 240 250 260 pF1KE3 ARQIELDLNRTFPNNKHFTCPTSSFPDKLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVL :.::: :: ::.:.: :. : .::::: :..: : :::::: . .:: :: : NP_056 AKQIEKDLLRTMPSNACFASMGSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFL 160 170 180 190 200 210 270 280 290 300 310 320 pF1KE3 EEEESAFWCLVAIVETIMPADYYCNTLTASQVDQRVLQDLLSEKLPRLMAHLGQHHVDLS :::. ::: . ::.: ..::.:. .:: . :.:::::. :. . :::: : .: ..:: NP_056 EEED-AFWMMSAIIEDLLPASYFSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELS 220 230 240 250 260 270 330 340 350 360 370 380 pF1KE3 LVTFNWFLVVFADSLISNILLRVWDAFLYEGTKVVFRYALAIFKYNEKEILRLQNGLEIY :.:..:::..::. . ..:::.:: :.:::..:.:. .:.... .:.:... .:. :. NP_056 LITLHWFLTAFASVVDIKLLLRIWDLFFYEGSRVLFQLTLGMLHLKEEELIQSENSASIF 280 290 300 310 320 330 390 400 410 420 430 440 pF1KE3 QYLRFFTKTISNSRKLMNIAFNDMNPFRMKQLRQLRMVHRERLEAELRELEQLK-----A . : . . . ... :...:. . . .. : : : :. .: . NP_056 NTLSDIPSQMEDAELLLGVAMRLAGSLTDVAVETQRRKHLAYLIADQGQLLGAGTLTNLS 340 350 360 370 380 390 450 460 pF1KE3 EYLERRASRRRA-VSEGCASEDEVEGEA . ..::..::.. .. .::..: NP_056 QVVRRRTQRRKSTITALLFGEDDLEALKAKNIKQTELVADLREAILRVARHFQCTDPKNC 400 410 420 430 440 450 >>XP_005261630 (OMIM: 610440) PREDICTED: small G protein (756 aa) initn: 479 init1: 403 opt: 659 Z-score: 727.2 bits: 144.6 E(85289): 9.1e-34 Smith-Waterman score: 663; 33.3% identity (61.0% similar) in 415 aa overlap (77-465:22-419) 50 60 70 80 90 100 pF1KE3 ESKYLAGLRRLQEALGDEASECSELLRQLVQEAL-QWEAGEASSDSIELSPISKYDEYGF :: : .. : :... :. :::.:: XP_005 MSGSHTPACGPFSALTPSIWPQEILAKYTQKEESAEQPEFY----YDEFGF 10 20 30 40 110 120 130 140 150 pF1KE3 LTVPDYEVED-LKLLAKIQALESRSHHLLGLEAVDRPLRERWAA---------LGDL--- . . : .:::. .: : : : :: : .::: XP_005 RVYKEEGDEPGSSLLANSPLME------------DAPQRLRWQAHLEFTHNHDVGDLTWD 50 60 70 80 90 160 170 180 190 200 pF1KE3 -----VPSAE-LKQLLRAGVPREHRPRVWRWLVHLRVQHLHTPGCYQELLSRGQAREHPA .: .: :..:. ::.:. ::..: : .. .. :.:... .. : : XP_005 KIAVSLPRSEKLRSLVLAGIPHGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIA 100 110 120 130 140 150 210 220 230 240 250 260 pF1KE3 ARQIELDLNRTFPNNKHFTCPTSSFPDKLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVL :.::: :: ::.:.: :. : .::::: :..: : :::::: . .:: :: : XP_005 AKQIEKDLLRTMPSNACFASMGSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFL 160 170 180 190 200 210 270 280 290 300 310 320 pF1KE3 EEEESAFWCLVAIVETIMPADYYCNTLTASQVDQRVLQDLLSEKLPRLMAHLGQHHVDLS :::. ::: . ::.: ..::.:. .:: . :.:::::. :. . :::: : .: ..:: XP_005 EEED-AFWMMSAIIEDLLPASYFSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELS 220 230 240 250 260 270 330 340 350 360 370 380 pF1KE3 LVTFNWFLVVFADSLISNILLRVWDAFLYEGTKVVFRYALAIFKYNEKEILRLQNGLEIY :.:..:::..::. . ..:::.:: :.:::..:.:. .:.... .:.:... .:. :. XP_005 LITLHWFLTAFASVVDIKLLLRIWDLFFYEGSRVLFQLTLGMLHLKEEELIQSENSASIF 280 290 300 310 320 330 390 400 410 420 430 440 pF1KE3 QYLRFFTKTISNSRKLMNIAFNDMNPFRMKQLRQLRMVHRERLEAELRELEQLK-----A . : . . . ... :...:. . . .. : : : :. .: . XP_005 NTLSDIPSQMEDAELLLGVAMRLAGSLTDVAVETQRRKHLAYLIADQGQLLGAGTLTNLS 340 350 360 370 380 390 450 460 pF1KE3 EYLERRASRRRA-VSEGCASEDEVEGEA . ..::..::.. .. .::..: XP_005 QVVRRRTQRRKSTITALLFGEDDLEALKAKNIKQTELVADLREAILRVARHFQCTDPKNC 400 410 420 430 440 450 >>XP_005261629 (OMIM: 610440) PREDICTED: small G protein (766 aa) initn: 479 init1: 403 opt: 659 Z-score: 727.2 bits: 144.6 E(85289): 9.2e-34 Smith-Waterman score: 663; 33.3% identity (61.0% similar) in 415 aa overlap (77-465:22-419) 50 60 70 80 90 100 pF1KE3 ESKYLAGLRRLQEALGDEASECSELLRQLVQEAL-QWEAGEASSDSIELSPISKYDEYGF :: : .. : :... :. :::.:: XP_005 MSGSHTPACGPFSALTPSIWPQEILAKYTQKEESAEQPEFY----YDEFGF 10 20 30 40 110 120 130 140 150 pF1KE3 LTVPDYEVED-LKLLAKIQALESRSHHLLGLEAVDRPLRERWAA---------LGDL--- . . : .:::. .: : : : :: : .::: XP_005 RVYKEEGDEPGSSLLANSPLME------------DAPQRLRWQAHLEFTHNHDVGDLTWD 50 60 70 80 90 160 170 180 190 200 pF1KE3 -----VPSAE-LKQLLRAGVPREHRPRVWRWLVHLRVQHLHTPGCYQELLSRGQAREHPA .: .: :..:. ::.:. ::..: : .. .. :.:... .. : : XP_005 KIAVSLPRSEKLRSLVLAGIPHGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIA 100 110 120 130 140 150 210 220 230 240 250 260 pF1KE3 ARQIELDLNRTFPNNKHFTCPTSSFPDKLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVL :.::: :: ::.:.: :. : .::::: :..: : :::::: . .:: :: : XP_005 AKQIEKDLLRTMPSNACFASMGSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFL 160 170 180 190 200 210 270 280 290 300 310 320 pF1KE3 EEEESAFWCLVAIVETIMPADYYCNTLTASQVDQRVLQDLLSEKLPRLMAHLGQHHVDLS :::. ::: . ::.: ..::.:. .:: . :.:::::. :. . :::: : .: ..:: XP_005 EEED-AFWMMSAIIEDLLPASYFSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELS 220 230 240 250 260 270 330 340 350 360 370 380 pF1KE3 LVTFNWFLVVFADSLISNILLRVWDAFLYEGTKVVFRYALAIFKYNEKEILRLQNGLEIY :.:..:::..::. . ..:::.:: :.:::..:.:. .:.... .:.:... .:. :. XP_005 LITLHWFLTAFASVVDIKLLLRIWDLFFYEGSRVLFQLTLGMLHLKEEELIQSENSASIF 280 290 300 310 320 330 390 400 410 420 430 440 pF1KE3 QYLRFFTKTISNSRKLMNIAFNDMNPFRMKQLRQLRMVHRERLEAELRELEQLK-----A . : . . . ... :...:. . . .. : : : :. .: . XP_005 NTLSDIPSQMEDAELLLGVAMRLAGSLTDVAVETQRRKHLAYLIADQGQLLGAGTLTNLS 340 350 360 370 380 390 450 460 pF1KE3 EYLERRASRRRA-VSEGCASEDEVEGEA . ..::..::.. .. .::..: XP_005 QVVRRRTQRRKSTITALLFGEDDLEALKAKNIKQTELVADLREAILRVARHFQCTDPKNC 400 410 420 430 440 450 >>NP_001288778 (OMIM: 610440) small G protein signaling (660 aa) initn: 442 init1: 403 opt: 652 Z-score: 720.4 bits: 143.1 E(85289): 2.2e-33 Smith-Waterman score: 652; 34.9% identity (66.7% similar) in 327 aa overlap (146-465:31-356) 120 130 140 150 160 170 pF1KE3 LKLLAKIQALESRSHHLLGLEAVDRPLRERWAALGDLVPSAE-LKQLLRAGVPREHRPRV : .. .: .: :..:. ::.:. ::.. NP_001 MSLVSVCTRKRLRWQAHLEFTHNHDVGDLTWDKIAVSLPRSEKLRSLVLAGIPHGMRPQL 10 20 30 40 50 60 180 190 200 210 220 230 pF1KE3 WRWLVHLRVQHLHTPGCYQELLSRGQAREHPAARQIELDLNRTFPNNKHFTCPTSSFPDK : : .. .. :.:... .. : ::.::: :: ::.:.: :. : . NP_001 WMRLSGALQKKRNSELSYREIVKNSSNDETIAAKQIEKDLLRTMPSNACFASMGSIGVPR 70 80 90 100 110 120 240 250 260 270 280 290 pF1KE3 LRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLEEEESAFWCLVAIVETIMPADYYCNTLT ::::: :..: : :::::: . .:: :: ::::. ::: . ::.: ..::.:. .:: NP_001 LRRVLRALAWLYPEIGYCQGTGMVAACLLLFLEEED-AFWMMSAIIEDLLPASYFSTTLL 130 140 150 160 170 300 310 320 330 340 350 pF1KE3 ASQVDQRVLQDLLSEKLPRLMAHLGQHHVDLSLVTFNWFLVVFADSLISNILLRVWDAFL . :.:::::. :. . :::: : .: ..:::.:..:::..::. . ..:::.:: :. NP_001 GVQTDQRVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLTAFASVVDIKLLLRIWDLFF 180 190 200 210 220 230 360 370 380 390 400 410 pF1KE3 YEGTKVVFRYALAIFKYNEKEILRLQNGLEIYQYLRFFTKTISNSRKLMNIAFNDMNPFR :::..:.:. .:.... .:.:... .:. :.. : . . . ... :...:. . . NP_001 YEGSRVLFQLTLGMLHLKEEELIQSENSASIFNTLSDIPSQMEDAELLLGVAMRLAGSLT 240 250 260 270 280 290 420 430 440 450 460 pF1KE3 MKQLRQLRMVHRERLEAELRELEQLK-----AEYLERRASRRRA-VSEGCASEDEVEGEA .. : : : :. .: .. ..::..::.. .. .::..: NP_001 DVAVETQRRKHLAYLIADQGQLLGAGTLTNLSQVVRRRTQRRKSTITALLFGEDDLEALK 300 310 320 330 340 350 NP_001 AKNIKQTELVADLREAILRVARHFQCTDPKNCSVELTPDYSMESHQRDHENYVACSRSHR 360 370 380 390 400 410 468 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 08:59:25 2016 done: Sun Nov 6 08:59:27 2016 Total Scan time: 8.360 Total Display time: 0.070 Function used was FASTA [36.3.4 Apr, 2011]