FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3659, 175 aa 1>>>pF1KE3659 175 - 175 aa - 175 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.0782+/-0.000264; mu= 20.4708+/- 0.017 mean_var=67.4990+/-13.602, 0's: 0 Z-trim(119.5): 12 B-trim: 0 in 0/58 Lambda= 0.156108 statistics sampled from 33531 (33543) to 33531 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.762), E-opt: 0.2 (0.393), width: 16 Scan time: 6.070 The best scores are: opt bits E(85289) NP_005845 (OMIM: 605154) receptor activity-modifyi ( 175) 1214 281.1 6.1e-76 XP_016858642 (OMIM: 605153) PREDICTED: receptor ac ( 126) 248 63.4 1.5e-10 XP_016858641 (OMIM: 605153) PREDICTED: receptor ac ( 126) 248 63.4 1.5e-10 NP_001295282 (OMIM: 605153) receptor activity-modi ( 126) 248 63.4 1.5e-10 XP_016858643 (OMIM: 605153) PREDICTED: receptor ac ( 126) 248 63.4 1.5e-10 XP_016858645 (OMIM: 605153) PREDICTED: receptor ac ( 126) 248 63.4 1.5e-10 NP_005847 (OMIM: 605155) receptor activity-modifyi ( 148) 248 63.5 1.7e-10 NP_005846 (OMIM: 605153) receptor activity-modifyi ( 148) 248 63.5 1.7e-10 XP_006715694 (OMIM: 605155) PREDICTED: receptor ac ( 259) 246 63.3 3.3e-10 XP_016867155 (OMIM: 605155) PREDICTED: receptor ac ( 116) 239 61.3 5.9e-10 >>NP_005845 (OMIM: 605154) receptor activity-modifying p (175 aa) initn: 1214 init1: 1214 opt: 1214 Z-score: 1484.4 bits: 281.1 E(85289): 6.1e-76 Smith-Waterman score: 1214; 100.0% identity (100.0% similar) in 175 aa overlap (1-175:1-175) 10 20 30 40 50 60 pF1KE3 MASLRVERAGGPRLPRTRVGRPAALRLLLLLGAVLNPHEALAQPLPTTGTPGSEGGTVKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 MASLRVERAGGPRLPRTRVGRPAALRLLLLLGAVLNPHEALAQPLPTTGTPGSEGGTVKN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 YETAVQFCWNHYKDQMDPIEKDWCDWAMISRPYSTLRDCLEHFAELFDLGFPNPLAERII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 YETAVQFCWNHYKDQMDPIEKDWCDWAMISRPYSTLRDCLEHFAELFDLGFPNPLAERII 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 FETHQIHFANCSLVQPTFSDPPEDVLLAMIIAPICLIPFLITLVVWRSKDSEAQA ::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 FETHQIHFANCSLVQPTFSDPPEDVLLAMIIAPICLIPFLITLVVWRSKDSEAQA 130 140 150 160 170 >>XP_016858642 (OMIM: 605153) PREDICTED: receptor activi (126 aa) initn: 256 init1: 230 opt: 248 Z-score: 310.2 bits: 63.4 E(85289): 1.5e-10 Smith-Waterman score: 248; 32.4% identity (63.9% similar) in 108 aa overlap (66-172:16-123) 40 50 60 70 80 90 pF1KE3 NPHEALAQPLPTTGTPGSEGGTVKNYETAVQFCWNHYKDQMDPI-EKDWCDWAMISRPYS ..: .... .:. . : ::::. : : XP_016 MTTACQEANYGALLRELCLTQFQVDMEAVGETLWCDWGRTIRSYR 10 20 30 40 100 110 120 130 140 150 pF1KE3 TLRDCLEHFAELFDLGFPNPLAERIIFETHQIHFANCSLVQPTFSDPPEDVLLAMIIAPI : :: :.:: . .:: ..:... .: .: .: . . ::: ..: .:..:: XP_016 ELADCTWHMAEKLGCFWPNAEVDRFFLAVHGRYFRSCPISGRAVRDPPGSILYPFIVVPI 50 60 70 80 90 100 160 170 pF1KE3 CLIPFLITLVVWRSKDSEAQA . .. .::::.:: .: XP_016 TVTLLVTALVVWQSKRTEGIV 110 120 >>XP_016858641 (OMIM: 605153) PREDICTED: receptor activi (126 aa) initn: 256 init1: 230 opt: 248 Z-score: 310.2 bits: 63.4 E(85289): 1.5e-10 Smith-Waterman score: 248; 32.4% identity (63.9% similar) in 108 aa overlap (66-172:16-123) 40 50 60 70 80 90 pF1KE3 NPHEALAQPLPTTGTPGSEGGTVKNYETAVQFCWNHYKDQMDPI-EKDWCDWAMISRPYS ..: .... .:. . : ::::. : : XP_016 MTTACQEANYGALLRELCLTQFQVDMEAVGETLWCDWGRTIRSYR 10 20 30 40 100 110 120 130 140 150 pF1KE3 TLRDCLEHFAELFDLGFPNPLAERIIFETHQIHFANCSLVQPTFSDPPEDVLLAMIIAPI : :: :.:: . .:: ..:... .: .: .: . . ::: ..: .:..:: XP_016 ELADCTWHMAEKLGCFWPNAEVDRFFLAVHGRYFRSCPISGRAVRDPPGSILYPFIVVPI 50 60 70 80 90 100 160 170 pF1KE3 CLIPFLITLVVWRSKDSEAQA . .. .::::.:: .: XP_016 TVTLLVTALVVWQSKRTEGIV 110 120 >>NP_001295282 (OMIM: 605153) receptor activity-modifyin (126 aa) initn: 256 init1: 230 opt: 248 Z-score: 310.2 bits: 63.4 E(85289): 1.5e-10 Smith-Waterman score: 248; 32.4% identity (63.9% similar) in 108 aa overlap (66-172:16-123) 40 50 60 70 80 90 pF1KE3 NPHEALAQPLPTTGTPGSEGGTVKNYETAVQFCWNHYKDQMDPI-EKDWCDWAMISRPYS ..: .... .:. . : ::::. : : NP_001 MTTACQEANYGALLRELCLTQFQVDMEAVGETLWCDWGRTIRSYR 10 20 30 40 100 110 120 130 140 150 pF1KE3 TLRDCLEHFAELFDLGFPNPLAERIIFETHQIHFANCSLVQPTFSDPPEDVLLAMIIAPI : :: :.:: . .:: ..:... .: .: .: . . ::: ..: .:..:: NP_001 ELADCTWHMAEKLGCFWPNAEVDRFFLAVHGRYFRSCPISGRAVRDPPGSILYPFIVVPI 50 60 70 80 90 100 160 170 pF1KE3 CLIPFLITLVVWRSKDSEAQA . .. .::::.:: .: NP_001 TVTLLVTALVVWQSKRTEGIV 110 120 >>XP_016858643 (OMIM: 605153) PREDICTED: receptor activi (126 aa) initn: 256 init1: 230 opt: 248 Z-score: 310.2 bits: 63.4 E(85289): 1.5e-10 Smith-Waterman score: 248; 32.4% identity (63.9% similar) in 108 aa overlap (66-172:16-123) 40 50 60 70 80 90 pF1KE3 NPHEALAQPLPTTGTPGSEGGTVKNYETAVQFCWNHYKDQMDPI-EKDWCDWAMISRPYS ..: .... .:. . : ::::. : : XP_016 MTTACQEANYGALLRELCLTQFQVDMEAVGETLWCDWGRTIRSYR 10 20 30 40 100 110 120 130 140 150 pF1KE3 TLRDCLEHFAELFDLGFPNPLAERIIFETHQIHFANCSLVQPTFSDPPEDVLLAMIIAPI : :: :.:: . .:: ..:... .: .: .: . . ::: ..: .:..:: XP_016 ELADCTWHMAEKLGCFWPNAEVDRFFLAVHGRYFRSCPISGRAVRDPPGSILYPFIVVPI 50 60 70 80 90 100 160 170 pF1KE3 CLIPFLITLVVWRSKDSEAQA . .. .::::.:: .: XP_016 TVTLLVTALVVWQSKRTEGIV 110 120 >>XP_016858645 (OMIM: 605153) PREDICTED: receptor activi (126 aa) initn: 256 init1: 230 opt: 248 Z-score: 310.2 bits: 63.4 E(85289): 1.5e-10 Smith-Waterman score: 248; 32.4% identity (63.9% similar) in 108 aa overlap (66-172:16-123) 40 50 60 70 80 90 pF1KE3 NPHEALAQPLPTTGTPGSEGGTVKNYETAVQFCWNHYKDQMDPI-EKDWCDWAMISRPYS ..: .... .:. . : ::::. : : XP_016 MTTACQEANYGALLRELCLTQFQVDMEAVGETLWCDWGRTIRSYR 10 20 30 40 100 110 120 130 140 150 pF1KE3 TLRDCLEHFAELFDLGFPNPLAERIIFETHQIHFANCSLVQPTFSDPPEDVLLAMIIAPI : :: :.:: . .:: ..:... .: .: .: . . ::: ..: .:..:: XP_016 ELADCTWHMAEKLGCFWPNAEVDRFFLAVHGRYFRSCPISGRAVRDPPGSILYPFIVVPI 50 60 70 80 90 100 160 170 pF1KE3 CLIPFLITLVVWRSKDSEAQA . .. .::::.:: .: XP_016 TVTLLVTALVVWQSKRTEGIV 110 120 >>NP_005847 (OMIM: 605155) receptor activity-modifying p (148 aa) initn: 285 init1: 224 opt: 248 Z-score: 309.4 bits: 63.5 E(85289): 1.7e-10 Smith-Waterman score: 248; 28.9% identity (56.3% similar) in 142 aa overlap (32-172:4-145) 10 20 30 40 50 60 pF1KE3 ASLRVERAGGPRLPRTRVGRPAALRLLLLLGAVLNPHEALAQPLPTTGTPGSEGGTVKNY ::. :. : : : . : . .. NP_005 METGALRRPQLLPLLLLLCGGCPRAGGCNETGM 10 20 30 70 80 90 100 110 120 pF1KE3 ETAVQFCWNHYKDQMDPIEK-DWCDWAMISRPYSTLRDCLEHFAELFDLGFPNPLAERII . .: . . :.: .. ::. . . : .. .: : :.. .:::::. .: NP_005 LERLPLCGKAFADMMGKVDVWKWCNLSEFIVYYESFTNCTEMEANVVGCYWPNPLAQGFI 40 50 60 70 80 90 130 140 150 160 170 pF1KE3 FETHQIHFANCSLVQPTFSDPPEDVLLAMIIAPICLIPFLITLVVWRSKDSEAQA :. :.::.. . . :::..::. .:. :. : . ::::::: .. NP_005 TGIHRQFFSNCTVDRVHLEDPPDEVLIPLIVIPVVLTVAMAGLVVWRSKRTDTLL 100 110 120 130 140 >>NP_005846 (OMIM: 605153) receptor activity-modifying p (148 aa) initn: 259 init1: 230 opt: 248 Z-score: 309.4 bits: 63.5 E(85289): 1.7e-10 Smith-Waterman score: 248; 32.4% identity (63.9% similar) in 108 aa overlap (66-172:38-145) 40 50 60 70 80 90 pF1KE3 NPHEALAQPLPTTGTPGSEGGTVKNYETAVQFCWNHYKDQMDPI-EKDWCDWAMISRPYS ..: .... .:. . : ::::. : : NP_005 LPRRGLWLLLAHHLFMTTACQEANYGALLRELCLTQFQVDMEAVGETLWCDWGRTIRSYR 10 20 30 40 50 60 100 110 120 130 140 150 pF1KE3 TLRDCLEHFAELFDLGFPNPLAERIIFETHQIHFANCSLVQPTFSDPPEDVLLAMIIAPI : :: :.:: . .:: ..:... .: .: .: . . ::: ..: .:..:: NP_005 ELADCTWHMAEKLGCFWPNAEVDRFFLAVHGRYFRSCPISGRAVRDPPGSILYPFIVVPI 70 80 90 100 110 120 160 170 pF1KE3 CLIPFLITLVVWRSKDSEAQA . .. .::::.:: .: NP_005 TVTLLVTALVVWQSKRTEGIV 130 140 >>XP_006715694 (OMIM: 605155) PREDICTED: receptor activi (259 aa) initn: 296 init1: 224 opt: 246 Z-score: 304.2 bits: 63.3 E(85289): 3.3e-10 Smith-Waterman score: 246; 29.6% identity (59.2% similar) in 125 aa overlap (49-172:132-256) 20 30 40 50 60 70 pF1KE3 VGRPAALRLLLLLGAVLNPHEALAQPLPTTGTPGSEGGTVKNYETAVQFCWNHYKDQMDP : : . : . .. . .: . . :.: XP_006 LSSGSVPVGHLEGGTVKLQKDTGLHSCRDGGCPRAGGCNETGMLERLPLCGKAFADMMGK 110 120 130 140 150 160 80 90 100 110 120 130 pF1KE3 IEK-DWCDWAMISRPYSTLRDCLEHFAELFDLGFPNPLAERIIFETHQIHFANCSLVQPT .. ::. . . : .. .: : :.. .:::::. .: :. :.::.. . XP_006 VDVWKWCNLSEFIVYYESFTNCTEMEANVVGCYWPNPLAQGFITGIHRQFFSNCTVDRVH 170 180 190 200 210 220 140 150 160 170 pF1KE3 FSDPPEDVLLAMIIAPICLIPFLITLVVWRSKDSEAQA . :::..::. .:. :. : . ::::::: .. XP_006 LEDPPDEVLIPLIVIPVVLTVAMAGLVVWRSKRTDTLL 230 240 250 >>XP_016867155 (OMIM: 605155) PREDICTED: receptor activi (116 aa) initn: 258 init1: 224 opt: 239 Z-score: 299.7 bits: 61.3 E(85289): 5.9e-10 Smith-Waterman score: 239; 31.8% identity (61.7% similar) in 107 aa overlap (67-172:7-113) 40 50 60 70 80 90 pF1KE3 PHEALAQPLPTTGTPGSEGGTVKNYETAVQFCWNHYKDQMDPIEK-DWCDWAMISRPYST .: . . :.: .. ::. . . : . XP_016 MLERLPLCGKAFADMMGKVDVWKWCNLSEFIVYYES 10 20 30 100 110 120 130 140 150 pF1KE3 LRDCLEHFAELFDLGFPNPLAERIIFETHQIHFANCSLVQPTFSDPPEDVLLAMIIAPIC . .: : :.. .:::::. .: :. :.::.. . . :::..::. .:. :. XP_016 FTNCTEMEANVVGCYWPNPLAQGFITGIHRQFFSNCTVDRVHLEDPPDEVLIPLIVIPVV 40 50 60 70 80 90 160 170 pF1KE3 LIPFLITLVVWRSKDSEAQA : . ::::::: .. XP_016 LTVAMAGLVVWRSKRTDTLL 100 110 175 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 00:23:00 2016 done: Mon Nov 7 00:23:01 2016 Total Scan time: 6.070 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]