FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2622, 349 aa 1>>>pF1KE2622 349 - 349 aa - 349 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.0954+/-0.000454; mu= 7.4612+/- 0.028 mean_var=176.9242+/-37.460, 0's: 0 Z-trim(115.1): 254 B-trim: 938 in 2/59 Lambda= 0.096423 statistics sampled from 24935 (25324) to 24935 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.664), E-opt: 0.2 (0.297), width: 16 Scan time: 6.690 The best scores are: opt bits E(85289) XP_016881684 (OMIM: 615747) PREDICTED: carcinoembr ( 349) 2327 336.4 5.7e-92 NP_001807 (OMIM: 615747) carcinoembryonic antigen- ( 349) 2327 336.4 5.7e-92 XP_016881683 (OMIM: 615747) PREDICTED: carcinoembr ( 368) 2162 313.4 4.8e-85 XP_011524642 (OMIM: 615747) PREDICTED: carcinoembr ( 415) 2162 313.5 5.3e-85 XP_016881685 (OMIM: 615747) PREDICTED: carcinoembr ( 331) 2152 312.0 1.2e-84 NP_002474 (OMIM: 163980) carcinoembryonic antigen- ( 344) 1792 261.9 1.4e-69 NP_001171745 (OMIM: 109770) carcinoembryonic antig ( 368) 1778 260.0 5.8e-69 NP_001171742 (OMIM: 109770) carcinoembryonic antig ( 430) 1778 260.1 6.5e-69 XP_011525508 (OMIM: 109770) PREDICTED: carcinoembr ( 351) 1730 253.3 5.8e-67 NP_001020083 (OMIM: 109770) carcinoembryonic antig ( 464) 1725 252.8 1.1e-66 NP_001192273 (OMIM: 109770) carcinoembryonic antig ( 468) 1725 252.8 1.1e-66 NP_001703 (OMIM: 109770) carcinoembryonic antigen- ( 526) 1725 252.8 1.2e-66 NP_001171744 (OMIM: 109770) carcinoembryonic antig ( 461) 1722 252.3 1.5e-66 XP_011525292 (OMIM: 163980) PREDICTED: carcinoembr ( 324) 1714 251.1 2.6e-66 XP_005258470 (OMIM: 114890) PREDICTED: carcinoembr ( 524) 1614 237.4 5.5e-62 XP_016881634 (OMIM: 114890) PREDICTED: carcinoembr ( 701) 1614 237.5 6.7e-62 NP_001295327 (OMIM: 114890) carcinoembryonic antig ( 701) 1614 237.5 6.7e-62 NP_004354 (OMIM: 114890) carcinoembryonic antigen- ( 702) 1614 237.5 6.7e-62 NP_001278413 (OMIM: 114890) carcinoembryonic antig ( 702) 1614 237.5 6.7e-62 XP_011524624 (OMIM: 114890) PREDICTED: carcinoembr ( 524) 1607 236.4 1.1e-61 XP_011524643 (OMIM: 615747) PREDICTED: carcinoembr ( 255) 1586 233.1 5e-61 XP_016881687 (OMIM: 615747) PREDICTED: carcinoembr ( 255) 1586 233.1 5e-61 XP_011524644 (OMIM: 615747) PREDICTED: carcinoembr ( 255) 1586 233.1 5e-61 XP_011525428 (OMIM: 176392) PREDICTED: pregnancy-s ( 357) 1304 194.1 4e-49 XP_011525288 (OMIM: 176397) PREDICTED: pregnancy-s ( 326) 1300 193.5 5.6e-49 XP_005259132 (OMIM: 176398) PREDICTED: pregnancy-s ( 402) 1285 191.5 2.7e-48 NP_001288637 (OMIM: 176398) pregnancy-specific bet ( 333) 1281 190.8 3.5e-48 NP_998798 (OMIM: 176393) pregnancy-specific beta-1 ( 326) 1277 190.3 5.1e-48 NP_112536 (OMIM: 176391) pregnancy-specific beta-1 ( 335) 1274 189.9 7e-48 XP_016882491 (OMIM: 176393) PREDICTED: pregnancy-s ( 333) 1273 189.7 7.6e-48 NP_001263424 (OMIM: 176393) pregnancy-specific bet ( 326) 1270 189.3 1e-47 XP_011525427 (OMIM: 176390) PREDICTED: pregnancy-s ( 333) 1267 188.9 1.4e-47 XP_016882490 (OMIM: 176393) PREDICTED: pregnancy-s ( 333) 1266 188.8 1.5e-47 NP_001317453 (OMIM: 176390) pregnancy-specific bet ( 326) 1262 188.2 2.2e-47 NP_001123486 (OMIM: 176394) pregnancy-specific bet ( 335) 1262 188.2 2.2e-47 NP_002772 (OMIM: 176394) pregnancy-specific beta-1 ( 335) 1262 188.2 2.2e-47 XP_016882492 (OMIM: 176394) PREDICTED: pregnancy-s ( 335) 1262 188.2 2.2e-47 XP_005259122 (OMIM: 176390) PREDICTED: pregnancy-s ( 333) 1257 187.5 3.6e-47 NP_002776 (OMIM: 176401) pregnancy-specific beta-1 ( 335) 1255 187.2 4.4e-47 XP_016882494 (OMIM: 176398) PREDICTED: pregnancy-s ( 402) 1246 186.1 1.2e-46 NP_001288636 (OMIM: 176398) pregnancy-specific bet ( 333) 1242 185.4 1.5e-46 XP_016881635 (OMIM: 114890) PREDICTED: carcinoembr ( 617) 1220 182.6 1.9e-45 XP_016881686 (OMIM: 615747) PREDICTED: carcinoembr ( 295) 1203 179.9 6e-45 XP_016882489 (OMIM: 176393) PREDICTED: pregnancy-s ( 342) 1168 175.1 1.9e-43 XP_016882488 (OMIM: 176393) PREDICTED: pregnancy-s ( 349) 1164 174.6 2.9e-43 XP_016882487 (OMIM: 176393) PREDICTED: pregnancy-s ( 349) 1157 173.6 5.7e-43 XP_011525429 (OMIM: 176392) PREDICTED: pregnancy-s ( 272) 946 144.1 3.3e-34 NP_066296 (OMIM: 176392) pregnancy-specific beta-1 ( 428) 777 120.8 5.3e-27 NP_001276971 (OMIM: 176396) putative pregnancy-spe ( 238) 762 118.5 1.5e-26 NP_001193579 (OMIM: 176396) putative pregnancy-spe ( 297) 762 118.6 1.8e-26 >>XP_016881684 (OMIM: 615747) PREDICTED: carcinoembryoni (349 aa) initn: 2327 init1: 2327 opt: 2327 Z-score: 1772.1 bits: 336.4 E(85289): 5.7e-92 Smith-Waterman score: 2327; 100.0% identity (100.0% similar) in 349 aa overlap (1-349:1-349) 10 20 30 40 50 60 pF1KE2 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH 250 260 270 280 290 300 310 320 330 340 pF1KE2 TTNSATGRNRTTVRMITVSDALVQGSSPGLSARATVSIMIGVLARVALI ::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TTNSATGRNRTTVRMITVSDALVQGSSPGLSARATVSIMIGVLARVALI 310 320 330 340 >>NP_001807 (OMIM: 615747) carcinoembryonic antigen-rela (349 aa) initn: 2327 init1: 2327 opt: 2327 Z-score: 1772.1 bits: 336.4 E(85289): 5.7e-92 Smith-Waterman score: 2327; 100.0% identity (100.0% similar) in 349 aa overlap (1-349:1-349) 10 20 30 40 50 60 pF1KE2 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH 250 260 270 280 290 300 310 320 330 340 pF1KE2 TTNSATGRNRTTVRMITVSDALVQGSSPGLSARATVSIMIGVLARVALI ::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TTNSATGRNRTTVRMITVSDALVQGSSPGLSARATVSIMIGVLARVALI 310 320 330 340 >>XP_016881683 (OMIM: 615747) PREDICTED: carcinoembryoni (368 aa) initn: 2209 init1: 2155 opt: 2162 Z-score: 1647.7 bits: 313.4 E(85289): 4.8e-85 Smith-Waterman score: 2162; 97.9% identity (98.5% similar) in 331 aa overlap (1-328:1-331) 10 20 30 40 50 60 pF1KE2 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH 250 260 270 280 290 300 310 320 330 340 pF1KE2 TTNSATGRNRTTVRMITVSDAL-VQG--SSPGLSARATVSIMIGVLARVALI ::::::::::::::::::: : .:: .:: XP_016 TTNSATGRNRTTVRMITVSAARNIQGFETSPQRSPNGRRSPLDDGGAAQTAPISAPSSLL 310 320 330 340 350 360 XP_016 PAIETCHN >>XP_011524642 (OMIM: 615747) PREDICTED: carcinoembryoni (415 aa) initn: 2209 init1: 2155 opt: 2162 Z-score: 1647.1 bits: 313.5 E(85289): 5.3e-85 Smith-Waterman score: 2162; 97.9% identity (98.5% similar) in 331 aa overlap (1-328:1-331) 10 20 30 40 50 60 pF1KE2 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH 250 260 270 280 290 300 310 320 330 340 pF1KE2 TTNSATGRNRTTVRMITVSDAL-VQG--SSPGLSARATVSIMIGVLARVALI ::::::::::::::::::: : .:: .:: XP_011 TTNSATGRNRTTVRMITVSAARNIQGFETSPQRSPNGRRSPLDDGGAAQTAPISAPSSLV 310 320 330 340 350 360 XP_011 TGPALTPPGVGPRCMEKVLRWPIPNLAKSSCQLKPSLPPVRLHKNGKTGSLREDS 370 380 390 400 410 >>XP_016881685 (OMIM: 615747) PREDICTED: carcinoembryoni (331 aa) initn: 2152 init1: 2152 opt: 2152 Z-score: 1640.8 bits: 312.0 E(85289): 1.2e-84 Smith-Waterman score: 2152; 100.0% identity (100.0% similar) in 319 aa overlap (1-319:1-319) 10 20 30 40 50 60 pF1KE2 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH 250 260 270 280 290 300 310 320 330 340 pF1KE2 TTNSATGRNRTTVRMITVSDALVQGSSPGLSARATVSIMIGVLARVALI ::::::::::::::::::: XP_016 TTNSATGRNRTTVRMITVSAPCHRDLPQLRH 310 320 330 >>NP_002474 (OMIM: 163980) carcinoembryonic antigen-rela (344 aa) initn: 1706 init1: 1706 opt: 1792 Z-score: 1369.9 bits: 261.9 E(85289): 1.4e-69 Smith-Waterman score: 1792; 78.2% identity (89.4% similar) in 349 aa overlap (1-349:1-344) 10 20 30 40 50 60 pF1KE2 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ ::: ::: :: ..::. .::::::.:::::::::.::::..: :.:::::::::.::::: NP_002 MGPPSAPPCRLHVPWKEVLLTASLLTFWNPPTTAKLTIESTPFNVAEGKEVLLLAHNLPQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY . ::.::::: ::.: :.::::..:: :::::::.:::::::::::..:::.:::: : NP_002 NRIGYSWYKGERVDGNSLIVGYVIGTQQATPGPAYSGRETIYPNASLLIQNVTQNDTGFY 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV :::::: .:..::.:::: :.:: ::::::::::::::::::::::::::.::::::::: NP_002 TLQVIKSDLVNEEATGQFHVYPELPKPSISSNNSNPVEDKDAVAFTCEPEVQNTTYLWWV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP ::::::::::::::::: ::::::: :::.: :::::::::::: :::::::::::::.: NP_002 NGQSLPVSPRLQLSNGNMTLTLLSVKRNDAGSYECEIQNPASANRSDPVTLNVLYGPDVP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH ::::: . :. : :::::::::::::.:::: .:::::: ::.:::::::..::::: :. NP_002 TISPSKANYRPGENLNLSCHAASNPPAQYSWFINGTFQQSTQELFIPNITVNNSGSYMCQ 250 260 270 280 290 300 310 320 330 340 pF1KE2 TTNSATGRNRTTVRMITVSDALVQGSSPGLSARATVSIMIGVLARVALI . ::::: ::::: ::::: ::.: ::: :::.: :::::::::: NP_002 AHNSATGLNRTTVTMITVS-----GSAPVLSAVATVGITIGVLARVALI 310 320 330 340 >>NP_001171745 (OMIM: 109770) carcinoembryonic antigen-r (368 aa) initn: 1837 init1: 1727 opt: 1778 Z-score: 1359.1 bits: 260.0 E(85289): 5.8e-69 Smith-Waterman score: 1778; 76.9% identity (90.9% similar) in 350 aa overlap (1-349:1-348) 10 20 30 40 50 60 pF1KE2 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ :: .::: : :.:::::::::::.:::::::::::: :..: :.::::::::::::::: NP_001 MGHLSAPLHRVRVPWQGLLLTASLLTFWNPPTTAQLTTESMPFNVAEGKEVLLLVHNLPQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY . ::.::::: ::.::.:.::.:..:: ::::: :.:::::::::::..:::.:::: : NP_001 QLFGYSWYKGERVDGNRQIVGYAIGTQQATPGPANSGRETIYPNASLLIQNVTQNDTGFY 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV :::::: .:..::.:::: :.:: ::::::::::::::::::::::::::::.::::::. NP_001 TLQVIKSDLVNEEATGQFHVYPELPKPSISSNNSNPVEDKDAVAFTCEPETQDTTYLWWI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP :.:::::::::::::::::::::::::::.::::::::::.::: :::::::: ::::.: NP_001 NNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVSANRSDPVTLNVTYGPDTP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH :::::::::. :.::.:::.::::::.:::: .:::::: ::.:::::::..:::::.:: NP_001 TISPSDTYYRPGANLSLSCYAASNPPAQYSWLINGTFQQSTQELFIPNITVNNSGSYTCH 250 260 270 280 290 300 310 320 330 340 pF1KE2 TTNSATGRNRTTVRMITVSD-ALVQGSSPGLSARATVSIMIGVLARVALI ..::.:: :::::. : :.: :: : . ::: : ..:.:::.: :::: NP_001 ANNSVTGCNRTTVKTIIVTDNALPQEN--GLSPGAIAGIVIGVVALVALIAVALACFLHF 310 320 330 340 350 NP_001 GKTGSSGPLQ 360 >>NP_001171742 (OMIM: 109770) carcinoembryonic antigen-r (430 aa) initn: 1837 init1: 1727 opt: 1778 Z-score: 1358.2 bits: 260.1 E(85289): 6.5e-69 Smith-Waterman score: 1778; 76.9% identity (90.9% similar) in 350 aa overlap (1-349:1-348) 10 20 30 40 50 60 pF1KE2 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ :: .::: : :.:::::::::::.:::::::::::: :..: :.::::::::::::::: NP_001 MGHLSAPLHRVRVPWQGLLLTASLLTFWNPPTTAQLTTESMPFNVAEGKEVLLLVHNLPQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY . ::.::::: ::.::.:.::.:..:: ::::: :.:::::::::::..:::.:::: : NP_001 QLFGYSWYKGERVDGNRQIVGYAIGTQQATPGPANSGRETIYPNASLLIQNVTQNDTGFY 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV :::::: .:..::.:::: :.:: ::::::::::::::::::::::::::::.::::::. NP_001 TLQVIKSDLVNEEATGQFHVYPELPKPSISSNNSNPVEDKDAVAFTCEPETQDTTYLWWI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP :.:::::::::::::::::::::::::::.::::::::::.::: :::::::: ::::.: NP_001 NNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVSANRSDPVTLNVTYGPDTP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH :::::::::. :.::.:::.::::::.:::: .:::::: ::.:::::::..:::::.:: NP_001 TISPSDTYYRPGANLSLSCYAASNPPAQYSWLINGTFQQSTQELFIPNITVNNSGSYTCH 250 260 270 280 290 300 310 320 330 340 pF1KE2 TTNSATGRNRTTVRMITVSD-ALVQGSSPGLSARATVSIMIGVLARVALI ..::.:: :::::. : :.: :: : . ::: : ..:.:::.: :::: NP_001 ANNSVTGCNRTTVKTIIVTDNALPQEN--GLSPGAIAGIVIGVVALVALIAVALACFLHF 310 320 330 340 350 NP_001 GKTGRASDQRDLTEHKPSVSNHTQDHSNDPPNKMNEVTYSTLNFEAQQPTQPTSASPSLT 360 370 380 390 400 410 >>XP_011525508 (OMIM: 109770) PREDICTED: carcinoembryoni (351 aa) initn: 1788 init1: 1729 opt: 1730 Z-score: 1323.2 bits: 253.3 E(85289): 5.8e-67 Smith-Waterman score: 1730; 77.1% identity (91.3% similar) in 332 aa overlap (1-329:1-332) 10 20 30 40 50 60 pF1KE2 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ :: .::: : :.:::::::::::.:::::::::::: :..: :.::::::::::::::: XP_011 MGHLSAPLHRVRVPWQGLLLTASLLTFWNPPTTAQLTTESMPFNVAEGKEVLLLVHNLPQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY . ::.::::: ::.::.:.::.:..:: ::::: :.:::::::::::..:::.:::: : XP_011 QLFGYSWYKGERVDGNRQIVGYAIGTQQATPGPANSGRETIYPNASLLIQNVTQNDTGFY 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV :::::: .:..::.:::: :.:: ::::::::::::::::::::::::::::.::::::. XP_011 TLQVIKSDLVNEEATGQFHVYPELPKPSISSNNSNPVEDKDAVAFTCEPETQDTTYLWWI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP :.:::::::::::::::::::::::::::.::::::::::.::: :::::::: ::::.: XP_011 NNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVSANRSDPVTLNVTYGPDTP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH :::::::::. :.::.:::.::::::.:::: .:::::: ::.:::::::..:::::.:: XP_011 TISPSDTYYRPGANLSLSCYAASNPPAQYSWLINGTFQQSTQELFIPNITVNNSGSYTCH 250 260 270 280 290 300 310 320 330 340 pF1KE2 TTNSATGRNRTTVRMITVSDALVQGSS---PGLSARATVSIMIGVLARVALI ..::.:: :::::. : :... : : . :: XP_011 ANNSVTGCNRTTVKTIIVTESPVLGEDEAVPGQHHPQHKPCQEGGCWDVLV 310 320 330 340 350 >>NP_001020083 (OMIM: 109770) carcinoembryonic antigen-r (464 aa) initn: 1831 init1: 1721 opt: 1725 Z-score: 1318.0 bits: 252.8 E(85289): 1.1e-66 Smith-Waterman score: 1725; 76.1% identity (90.7% similar) in 335 aa overlap (1-335:1-335) 10 20 30 40 50 60 pF1KE2 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ :: .::: : :.:::::::::::.:::::::::::: :..: :.::::::::::::::: NP_001 MGHLSAPLHRVRVPWQGLLLTASLLTFWNPPTTAQLTTESMPFNVAEGKEVLLLVHNLPQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY . ::.::::: ::.::.:.::.:..:: ::::: :.:::::::::::..:::.:::: : NP_001 QLFGYSWYKGERVDGNRQIVGYAIGTQQATPGPANSGRETIYPNASLLIQNVTQNDTGFY 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV :::::: .:..::.:::: :.:: ::::::::::::::::::::::::::::.::::::. NP_001 TLQVIKSDLVNEEATGQFHVYPELPKPSISSNNSNPVEDKDAVAFTCEPETQDTTYLWWI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP :.:::::::::::::::::::::::::::.::::::::::.::: :::::::: ::::.: NP_001 NNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVSANRSDPVTLNVTYGPDTP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH :::::::::. :.::.:::.::::::.:::: .:::::: ::.:::::::..:::::.:: NP_001 TISPSDTYYRPGANLSLSCYAASNPPAQYSWLINGTFQQSTQELFIPNITVNNSGSYTCH 250 260 270 280 290 300 310 320 330 340 pF1KE2 TTNSATGRNRTTVRMITVSDALVQGSSPGLSARATVSIMIGVLARVALI ..::.:: :::::. : :.. ..: ..: : NP_001 ANNSVTGCNRTTVKTIIVTELSPVVAKPQIKASKTTVTGDKDSVNLTCSTNDTGISIRWF 310 320 330 340 350 360 NP_001 FKNQSLPSSERMKLSQGNTTLSINPVKREDAGTYWCEVFNPISKNQSDPIMLNVNYNALP 370 380 390 400 410 420 >-- initn: 351 init1: 248 opt: 256 Z-score: 213.6 bits: 48.4 E(85289): 3.7e-05 Smith-Waterman score: 256; 45.5% identity (68.2% similar) in 88 aa overlap (159-244:340-427) 130 140 150 160 170 180 pF1KE2 LMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWVNGQSLPVS :::.: .:: . . . :. ..:::: : NP_001 RTTVKTIIVTELSPVVAKPQIKASKTTVTGDKDSVNLTCSTNDTGISIRWFFKNQSLPSS 310 320 330 340 350 360 190 200 210 220 230 240 pF1KE2 PRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYG--PDAPTISPSD :..::.:: ::.. : :.:.: : ::. :: : : :::. ::: :. :. .:: NP_001 ERMKLSQGNTTLSINPVKREDAGTYWCEVFNPISKNQSDPIMLNVNYNALPQENGLSPGA 370 380 390 400 410 420 250 260 270 280 290 300 pF1KE2 TYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACHTTNSAT NP_001 IAGIVIGVVALVALIAVALACFLHFGKTGSSGPLQ 430 440 450 460 349 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 17:14:03 2016 done: Tue Nov 8 17:14:04 2016 Total Scan time: 6.690 Total Display time: 0.030 Function used was FASTA [36.3.4 Apr, 2011]