FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1392, 93 aa 1>>>pF1KE1392 93 - 93 aa - 93 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0719+/-0.000547; mu= 10.0828+/- 0.033 mean_var=53.9655+/-10.651, 0's: 0 Z-trim(112.6): 5 B-trim: 0 in 0/51 Lambda= 0.174589 statistics sampled from 13292 (13296) to 13292 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.798), E-opt: 0.2 (0.408), width: 16 Scan time: 1.560 The best scores are: opt bits E(32554) CCDS4287.1 SCGB3A2 gene_id:117156|Hs108|chr5 ( 93) 582 153.5 1.8e-38 >>CCDS4287.1 SCGB3A2 gene_id:117156|Hs108|chr5 (93 aa) initn: 582 init1: 582 opt: 582 Z-score: 804.2 bits: 153.5 E(32554): 1.8e-38 Smith-Waterman score: 582; 100.0% identity (100.0% similar) in 93 aa overlap (1-93:1-93) 10 20 30 40 50 60 pF1KE1 MKLVTIFLLVTISLCSYSATAFLINKVPLPVDKLAPLPLDNILPFMDPLKLLLKTLGISV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 MKLVTIFLLVTISLCSYSATAFLINKVPLPVDKLAPLPLDNILPFMDPLKLLLKTLGISV 10 20 30 40 50 60 70 80 90 pF1KE1 EHLVEGLRKCVNELGPEASEAVKKLLEALSHLV ::::::::::::::::::::::::::::::::: CCDS42 EHLVEGLRKCVNELGPEASEAVKKLLEALSHLV 70 80 90 93 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 00:34:06 2016 done: Mon Nov 7 00:34:06 2016 Total Scan time: 1.560 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]