Result of FASTA (omim) for
pFN21AB7990
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7990, 326 aa
1>>>pF1KB7990 326 - 326 aa - 326 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.6696+/-0.00032; mu= 2.8715+/- 0.020
mean_var=212.3096+/-41.479, 0's: 0 Z-trim(124.2): 48 B-trim: 0 in 0/59
Lambda= 0.088022
statistics sampled from 45441 (45492) to 45441 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.826), E-opt: 0.2 (0.533), width: 16
Scan time: 8.050
The best scores are: opt bits E(85289)
NP_005244 (OMIM: 601575) fos-related antigen 2 [Ho ( 326) 2146 284.2 2.5e-76
XP_016859226 (OMIM: 601575) PREDICTED: fos-related ( 287) 1875 249.8 5.2e-66
XP_006712040 (OMIM: 601575) PREDICTED: fos-related ( 304) 1107 152.3 1.2e-36
XP_006712039 (OMIM: 601575) PREDICTED: fos-related ( 343) 1107 152.3 1.4e-36
XP_005264288 (OMIM: 601575) PREDICTED: fos-related ( 205) 1046 144.4 2e-34
NP_005243 (OMIM: 164810) proto-oncogene c-Fos [Hom ( 380) 630 91.8 2.5e-18
NP_005429 (OMIM: 136515) fos-related antigen 1 iso ( 271) 487 73.5 5.7e-13
NP_006723 (OMIM: 164772) protein fosB isoform 1 [H ( 338) 487 73.6 6.8e-13
XP_005258748 (OMIM: 164772) PREDICTED: protein fos ( 237) 458 69.8 6.6e-12
NP_001287785 (OMIM: 136515) fos-related antigen 1 ( 205) 399 62.2 1.1e-09
NP_001193417 (OMIM: 603148) cyclic AMP-dependent t ( 124) 278 46.7 3.1e-05
NP_001193413 (OMIM: 603148) cyclic AMP-dependent t ( 124) 278 46.7 3.1e-05
NP_001025458 (OMIM: 603148) cyclic AMP-dependent t ( 181) 278 46.8 4.1e-05
XP_005273203 (OMIM: 603148) PREDICTED: cyclic AMP- ( 181) 278 46.8 4.1e-05
NP_001665 (OMIM: 603148) cyclic AMP-dependent tran ( 181) 278 46.8 4.1e-05
XP_011507881 (OMIM: 603148) PREDICTED: cyclic AMP- ( 181) 278 46.8 4.1e-05
XP_016876463 (OMIM: 608657) PREDICTED: jun dimeriz ( 163) 261 44.6 0.00017
NP_001128519 (OMIM: 608657) jun dimerization prote ( 163) 261 44.6 0.00017
XP_005267389 (OMIM: 608657) PREDICTED: jun dimeriz ( 163) 261 44.6 0.00017
XP_016876462 (OMIM: 608657) PREDICTED: jun dimeriz ( 163) 261 44.6 0.00017
XP_016876464 (OMIM: 608657) PREDICTED: jun dimeriz ( 163) 261 44.6 0.00017
NP_001128520 (OMIM: 608657) jun dimerization prote ( 163) 261 44.6 0.00017
NP_569736 (OMIM: 608657) jun dimerization protein ( 163) 261 44.6 0.00017
NP_001128521 (OMIM: 608657) jun dimerization prote ( 174) 261 44.6 0.00018
XP_016876461 (OMIM: 608657) PREDICTED: jun dimeriz ( 174) 261 44.6 0.00018
NP_001107643 (OMIM: 164772) protein fosB isoform 2 ( 302) 265 45.3 0.00019
XP_016876460 (OMIM: 608657) PREDICTED: jun dimeriz ( 206) 261 44.7 0.0002
>>NP_005244 (OMIM: 601575) fos-related antigen 2 [Homo s (326 aa)
initn: 2146 init1: 2146 opt: 2146 Z-score: 1491.3 bits: 284.2 E(85289): 2.5e-76
Smith-Waterman score: 2146; 100.0% identity (100.0% similar) in 326 aa overlap (1-326:1-326)
10 20 30 40 50 60
pF1KB7 MYQDYPGNFDTSSRGSSGSPAHAESYSSGGGGQQKFRVDMPGSGSAFIPTINAITTSQDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MYQDYPGNFDTSSRGSSGSPAHAESYSSGGGGQQKFRVDMPGSGSAFIPTINAITTSQDL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 QWMVQPTVITSMSNPYPRSHPYSPLPGLASVPGHMALPRPGVIKTIGTTVGRRRRDEQLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 QWMVQPTVITSMSNPYPRSHPYSPLPGLASVPGHMALPRPGVIKTIGTTVGRRRRDEQLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 PEEEEKRRIRRERNKLAAAKCRNRRRELTEKLQAETEELEEEKSGLQKEIAELQKEKEKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PEEEEKRRIRRERNKLAAAKCRNRRRELTEKLQAETEELEEEKSGLQKEIAELQKEKEKL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 EFMLVAHGPVCKISPEERRSPPAPGLQPMRSGGGSVGAVVVKQEPLEEDSPSSSSAGLDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 EFMLVAHGPVCKISPEERRSPPAPGLQPMRSGGGSVGAVVVKQEPLEEDSPSSSSAGLDK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 AQRSVIKPISIAGGFYGEEPLHTPIVVTSTPAVTPGTSNLVFTYPSVLEQESPASPSESC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 AQRSVIKPISIAGGFYGEEPLHTPIVVTSTPAVTPGTSNLVFTYPSVLEQESPASPSESC
250 260 270 280 290 300
310 320
pF1KB7 SKAHRRSSSSGDQSSDSLNSPTLLAL
::::::::::::::::::::::::::
NP_005 SKAHRRSSSSGDQSSDSLNSPTLLAL
310 320
>>XP_016859226 (OMIM: 601575) PREDICTED: fos-related ant (287 aa)
initn: 1875 init1: 1875 opt: 1875 Z-score: 1306.1 bits: 249.8 E(85289): 5.2e-66
Smith-Waterman score: 1875; 100.0% identity (100.0% similar) in 287 aa overlap (40-326:1-287)
10 20 30 40 50 60
pF1KB7 DTSSRGSSGSPAHAESYSSGGGGQQKFRVDMPGSGSAFIPTINAITTSQDLQWMVQPTVI
::::::::::::::::::::::::::::::
XP_016 MPGSGSAFIPTINAITTSQDLQWMVQPTVI
10 20 30
70 80 90 100 110 120
pF1KB7 TSMSNPYPRSHPYSPLPGLASVPGHMALPRPGVIKTIGTTVGRRRRDEQLSPEEEEKRRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TSMSNPYPRSHPYSPLPGLASVPGHMALPRPGVIKTIGTTVGRRRRDEQLSPEEEEKRRI
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB7 RRERNKLAAAKCRNRRRELTEKLQAETEELEEEKSGLQKEIAELQKEKEKLEFMLVAHGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RRERNKLAAAKCRNRRRELTEKLQAETEELEEEKSGLQKEIAELQKEKEKLEFMLVAHGP
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB7 VCKISPEERRSPPAPGLQPMRSGGGSVGAVVVKQEPLEEDSPSSSSAGLDKAQRSVIKPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VCKISPEERRSPPAPGLQPMRSGGGSVGAVVVKQEPLEEDSPSSSSAGLDKAQRSVIKPI
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB7 SIAGGFYGEEPLHTPIVVTSTPAVTPGTSNLVFTYPSVLEQESPASPSESCSKAHRRSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIAGGFYGEEPLHTPIVVTSTPAVTPGTSNLVFTYPSVLEQESPASPSESCSKAHRRSSS
220 230 240 250 260 270
310 320
pF1KB7 SGDQSSDSLNSPTLLAL
:::::::::::::::::
XP_016 SGDQSSDSLNSPTLLAL
280
>>XP_006712040 (OMIM: 601575) PREDICTED: fos-related ant (304 aa)
initn: 1861 init1: 1107 opt: 1107 Z-score: 778.6 bits: 152.3 E(85289): 1.2e-36
Smith-Waterman score: 1831; 94.4% identity (94.4% similar) in 304 aa overlap (40-326:1-304)
10 20 30 40 50 60
pF1KB7 DTSSRGSSGSPAHAESYSSGGGGQQKFRVDMPGSGSAFIPTINAITTSQDLQWMVQPTVI
::::::::::::::::::::::::::::::
XP_006 MPGSGSAFIPTINAITTSQDLQWMVQPTVI
10 20 30
70 80 90 100 110 120
pF1KB7 TSMSNPYPRSHPYSPLPGLASVPGHMALPRPGVIKTIGTTVGRRRRDEQLSPEEEEKRRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TSMSNPYPRSHPYSPLPGLASVPGHMALPRPGVIKTIGTTVGRRRRDEQLSPEEEEKRRI
40 50 60 70 80 90
130 140 150 160 170
pF1KB7 RRERNKLAAAKCRNRRRELTEKLQA-----------------ETEELEEEKSGLQKEIAE
::::::::::::::::::::::::: ::::::::::::::::::
XP_006 RRERNKLAAAKCRNRRRELTEKLQAIGPWQVAVPHIPLFPWQETEELEEEKSGLQKEIAE
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB7 LQKEKEKLEFMLVAHGPVCKISPEERRSPPAPGLQPMRSGGGSVGAVVVKQEPLEEDSPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LQKEKEKLEFMLVAHGPVCKISPEERRSPPAPGLQPMRSGGGSVGAVVVKQEPLEEDSPS
160 170 180 190 200 210
240 250 260 270 280 290
pF1KB7 SSSAGLDKAQRSVIKPISIAGGFYGEEPLHTPIVVTSTPAVTPGTSNLVFTYPSVLEQES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SSSAGLDKAQRSVIKPISIAGGFYGEEPLHTPIVVTSTPAVTPGTSNLVFTYPSVLEQES
220 230 240 250 260 270
300 310 320
pF1KB7 PASPSESCSKAHRRSSSSGDQSSDSLNSPTLLAL
::::::::::::::::::::::::::::::::::
XP_006 PASPSESCSKAHRRSSSSGDQSSDSLNSPTLLAL
280 290 300
>>XP_006712039 (OMIM: 601575) PREDICTED: fos-related ant (343 aa)
initn: 2132 init1: 1107 opt: 1107 Z-score: 777.9 bits: 152.3 E(85289): 1.4e-36
Smith-Waterman score: 2102; 95.0% identity (95.0% similar) in 343 aa overlap (1-326:1-343)
10 20 30 40 50 60
pF1KB7 MYQDYPGNFDTSSRGSSGSPAHAESYSSGGGGQQKFRVDMPGSGSAFIPTINAITTSQDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MYQDYPGNFDTSSRGSSGSPAHAESYSSGGGGQQKFRVDMPGSGSAFIPTINAITTSQDL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 QWMVQPTVITSMSNPYPRSHPYSPLPGLASVPGHMALPRPGVIKTIGTTVGRRRRDEQLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QWMVQPTVITSMSNPYPRSHPYSPLPGLASVPGHMALPRPGVIKTIGTTVGRRRRDEQLS
70 80 90 100 110 120
130 140 150 160
pF1KB7 PEEEEKRRIRRERNKLAAAKCRNRRRELTEKLQA-----------------ETEELEEEK
:::::::::::::::::::::::::::::::::: :::::::::
XP_006 PEEEEKRRIRRERNKLAAAKCRNRRRELTEKLQAIGPWQVAVPHIPLFPWQETEELEEEK
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB7 SGLQKEIAELQKEKEKLEFMLVAHGPVCKISPEERRSPPAPGLQPMRSGGGSVGAVVVKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SGLQKEIAELQKEKEKLEFMLVAHGPVCKISPEERRSPPAPGLQPMRSGGGSVGAVVVKQ
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB7 EPLEEDSPSSSSAGLDKAQRSVIKPISIAGGFYGEEPLHTPIVVTSTPAVTPGTSNLVFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EPLEEDSPSSSSAGLDKAQRSVIKPISIAGGFYGEEPLHTPIVVTSTPAVTPGTSNLVFT
250 260 270 280 290 300
290 300 310 320
pF1KB7 YPSVLEQESPASPSESCSKAHRRSSSSGDQSSDSLNSPTLLAL
:::::::::::::::::::::::::::::::::::::::::::
XP_006 YPSVLEQESPASPSESCSKAHRRSSSSGDQSSDSLNSPTLLAL
310 320 330 340
>>XP_005264288 (OMIM: 601575) PREDICTED: fos-related ant (205 aa)
initn: 1084 init1: 1046 opt: 1046 Z-score: 739.1 bits: 144.4 E(85289): 2e-34
Smith-Waterman score: 1046; 98.1% identity (99.4% similar) in 158 aa overlap (1-158:1-158)
10 20 30 40 50 60
pF1KB7 MYQDYPGNFDTSSRGSSGSPAHAESYSSGGGGQQKFRVDMPGSGSAFIPTINAITTSQDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MYQDYPGNFDTSSRGSSGSPAHAESYSSGGGGQQKFRVDMPGSGSAFIPTINAITTSQDL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 QWMVQPTVITSMSNPYPRSHPYSPLPGLASVPGHMALPRPGVIKTIGTTVGRRRRDEQLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QWMVQPTVITSMSNPYPRSHPYSPLPGLASVPGHMALPRPGVIKTIGTTVGRRRRDEQLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 PEEEEKRRIRRERNKLAAAKCRNRRRELTEKLQAETEELEEEKSGLQKEIAELQKEKEKL
:::::::::::::::::::::::::::::::::::. .
XP_005 PEEEEKRRIRRERNKLAAAKCRNRRRELTEKLQAEASQKLMTFVRPLRQTETVFHSGICC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 EFMLVAHGPVCKISPEERRSPPAPGLQPMRSGGGSVGAVVVKQEPLEEDSPSSSSAGLDK
XP_005 PLLNEALARDRGAGGGEVRPAEGDC
190 200
>>NP_005243 (OMIM: 164810) proto-oncogene c-Fos [Homo sa (380 aa)
initn: 703 init1: 560 opt: 630 Z-score: 450.0 bits: 91.8 E(85289): 2.5e-18
Smith-Waterman score: 771; 42.4% identity (64.6% similar) in 387 aa overlap (1-317:2-371)
10 20 30 40
pF1KB7 MYQDYPGNFD-TSSRGSSGSPA-------H--AESYSSGGG--GQQKFRVDMPGSGSAF
:.. . .... .::: ::.::: : :.:.:: :. . : : .:. :.. :
NP_005 MMFSGFNADYEASSSRCSSASPAGDSLSYYHSPADSFSSMGSPVNAQDFCTDLAVSSANF
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB7 IPTINAITTSQDLQWMVQPTVITSMSNPYPRS-HPYSPLPGLASVPGHMALPRPGVIKTI
:::..::.:: ::::.:::....:.. :. ::.. .:. :. : : ::.::.
NP_005 IPTVTAISTSPDLQWLVQPALVSSVAPSQTRAPHPFG-VPA----PSAGAYSRAGVVKTM
70 80 90 100 110
110 120 130 140 150 160
pF1KB7 ----GTTVGRRRRDEQLSPEEEEKRRIRRERNKLAAAKCRNRRRELTEKLQAETEELEEE
. ..::: . :::::::::::::::::::.:::::::::::::. :::::..::.:
NP_005 TGGRAQSIGRRGKVEQLSPEEEEKRRIRRERNKMAAAKCRNRRRELTDTLQAETDQLEDE
120 130 140 150 160 170
170 180 190 200
pF1KB7 KSGLQKEIAELQKEKEKLEFMLVAHGPVCKIS-----PEERR--------------SP--
::.:: :::.: ::::::::.:.:: :.::: ::: .:
NP_005 KSALQTEIANLLKEKEKLEFILAAHRPACKIPDDLGFPEEMSVASLDLTGGLPEVATPES
180 190 200 210 220 230
210 220 230 240
pF1KB7 -------------PAPGLQPMRSGGGSVGAVVVKQEPLEE-DSPSSSSAGLDKAQRSVIK
: :...:..: .... .: ::... :.:: . ... :::
NP_005 EEAFTLPLLNDPEPKPSVEPVKS----ISSMELKTEPFDDFLFPASSRPSGSETARSV-P
240 250 260 270 280 290
250 260 270 280
pF1KB7 PISIAGGFYGE--EPLHT------PI----------VVTSTPAVTPGTSNLVFTYPSVLE
....:.::. ::::. :. ::: ::. : ::..:::::
NP_005 DMDLSGSFYAADWEPLHSGSLGMGPMATELEPLCTPVVTCTPSCTAYTSSFVFTYP----
300 310 320 330 340
290 300 310 320
pF1KB7 QESPASPSESCSKAHRRSSSSGDQSSDSLNSPTLLAL
:. . :: :. :::..:::.. ::::
NP_005 -EADSFPS--CAAAHRKGSSSNEPSSDSLSSPTLLAL
350 360 370 380
>>NP_005429 (OMIM: 136515) fos-related antigen 1 isoform (271 aa)
initn: 546 init1: 413 opt: 487 Z-score: 353.8 bits: 73.5 E(85289): 5.7e-13
Smith-Waterman score: 766; 46.7% identity (65.7% similar) in 332 aa overlap (1-326:1-271)
10 20 30 40 50
pF1KB7 MYQDY--PGNFDTSSRGSSGSPAHAESYSSGGGGQQKFRVDMPGSGSAFIPTINAITTSQ
:..:. :: .... :. :.::. . ... .::::.. .:.::... ::
NP_005 MFRDFGEPGP-SSGNGGGYGGPAQPPAAAQA--AQQKFHL---------VPSINTMSGSQ
10 20 30 40
60 70 80 90 100 110
pF1KB7 DLQWMVQPTVITSMSNPYPRSHP-YSPLPGLASVPGHMALPRPGVIKTIGTTVGRRRRD-
.::::::: . : : : ..: ::: : ::::::...: : :::
NP_005 ELQWMVQPHFLGPSSYPRPLTYPQYSP-------P----QPRPGVIRALGPPPGVRRRPC
50 60 70 80 90
120 130 140 150 160 170
pF1KB7 EQLSPEEEEKRRIRRERNKLAAAKCRNRRRELTEKLQAETEELEEEKSGLQKEIAELQKE
::.::::::.::.::::::::::::::::.:::. :::::..::.::::::.:: ::::.
NP_005 EQISPEEEERRRVRRERNKLAAAKCRNRRKELTDFLQAETDKLEDEKSGLQREIEELQKQ
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB7 KEKLEFMLVAHGPVCKISPEERRSPPAPGLQPMRSGGGSVGAVVVKQEPLEEDSPSSSSA
::.::..: :: :.::: :: :.. : :. :.:..
NP_005 KERLELVLEAHRPICKI-PE----------------GAKEG-----------DTGSTSGT
160 170 180
240 250 260 270 280 290
pF1KB7 GLDKAQRSVIKPISIAGGFYGE-EPLHTPIVVTSTPAVTPGTSNLVFTYPSVLEQESPAS
. : . ::.. : : : :::: ..: ::..:: : .::::::: .
NP_005 SSPPAPCRPVPCISLSPGPVLEPEALHTPTLMT-TPSLTPFTPSLVFTYPS--------T
190 200 210 220 230 240
300 310 320
pF1KB7 PSESCSKAHRRSSSS-GDQSSDSLNSPTLLAL
: : :..:::.:::: :: ::: :.:::::::
NP_005 P-EPCASAHRKSSSSSGDPSSDPLGSPTLLAL
250 260 270
>>NP_006723 (OMIM: 164772) protein fosB isoform 1 [Homo (338 aa)
initn: 638 init1: 433 opt: 487 Z-score: 352.5 bits: 73.6 E(85289): 6.8e-13
Smith-Waterman score: 722; 44.0% identity (63.4% similar) in 366 aa overlap (1-326:1-338)
10 20 30 40 50
pF1KB7 MYQDYPGNFDTSSRGSSGSPAHAESYSS---------GGGGQQKFRV-DMPGSGSAFIPT
:.: .::..:..:: ::. :... :: ....:. . .:::: :.::
NP_006 MFQAFPGDYDSGSRCSSSPSAESQYLSSVDSFGSPPTAAASQECAGLGEMPGS---FVPT
10 20 30 40 50
60 70 80 90 100
pF1KB7 INAITTSQDLQWMVQPTVITSM---------SNPYPRSHPYSPLPGLA-SVPGHMALPRP
..::::::::::.::::.:.:: :.: : ::. .:: . :.:: .
NP_006 VTAITTSQDLQWLVQPTLISSMAQSQGQPLASQP-PVVDPYD-MPGTSYSTPGMSGYSSG
60 70 80 90 100 110
110 120 130 140
pF1KB7 GVI-----KTIGTTVG-----------RRRRDEQLSPEEEEKRRIRRERNKLAAAKCRNR
:. .: ::: : :: :.: :.::::::::.:::::::::::::::
NP_006 GASGSGGPSTSGTTSGPGPARPARARPRRPREETLTPEEEEKRRVRRERNKLAAAKCRNR
120 130 140 150 160 170
150 160 170 180 190 200
pF1KB7 RRELTEKLQAETEELEEEKSGLQKEIAELQKEKEKLEFMLVAHGPVCKISPEERRSPPAP
:::::..:::::..:::::. :..::::::::::.:::.:::: : ::: :: :.:
NP_006 RRELTDRLQAETDQLEEEKAELESEIAELQKEKERLEFVLVAHKPGCKIPYEE---GPGP
180 190 200 210 220 230
210 220 230 240 250 260
pF1KB7 G-LQPMRSGGGSVGAVVVKQEPLEEDSPSSSSAGLDKAQRSVIKPISIAGGFYGEEPLHT
: : .:. ::. : :.. . : : : : : ....... :.
NP_006 GPLAEVRDLPGSAPA---KEDGFSWLLPPPPPPPLP-FQTSQDAPPNLTASLF----THS
240 250 260 270 280
270 280 290 300 310 320
pF1KB7 PIVVTSTP--AVTPG-TSNLVFTYPSVLEQESPASPSESCSKAHRRSSSSGDQSSDSLNS
. : . : .:.:. ::..:.: : : . . :.: :.: :: :: :::
NP_006 EVQVLGDPFPVVNPSYTSSFVLTCPEV----------SAFAGAQRTSGS--DQPSDPLNS
290 300 310 320 330
pF1KB7 PTLLAL
:.::::
NP_006 PSLLAL
>>XP_005258748 (OMIM: 164772) PREDICTED: protein fosB is (237 aa)
initn: 641 init1: 433 opt: 458 Z-score: 334.7 bits: 69.8 E(85289): 6.6e-12
Smith-Waterman score: 642; 51.0% identity (69.3% similar) in 241 aa overlap (1-205:1-233)
10 20 30 40 50
pF1KB7 MYQDYPGNFDTSSRGSSGSPAHAESYSS---------GGGGQQKFRV-DMPGSGSAFIPT
:.: .::..:..:: ::. :... :: ....:. . .:::: :.::
XP_005 MFQAFPGDYDSGSRCSSSPSAESQYLSSVDSFGSPPTAAASQECAGLGEMPGS---FVPT
10 20 30 40 50
60 70 80 90 100
pF1KB7 INAITTSQDLQWMVQPTVITSM---------SNPYPRSHPYSPLPGLA-SVPGHMALPRP
..::::::::::.::::.:.:: :.: : ::. .:: . :.:: .
XP_005 VTAITTSQDLQWLVQPTLISSMAQSQGQPLASQP-PVVDPYD-MPGTSYSTPGMSGYSSG
60 70 80 90 100 110
110 120 130 140
pF1KB7 GVI-----KTIGTTVG-----------RRRRDEQLSPEEEEKRRIRRERNKLAAAKCRNR
:. .: ::: : :: :.: :.::::::::.:::::::::::::::
XP_005 GASGSGGPSTSGTTSGPGPARPARARPRRPREETLTPEEEEKRRVRRERNKLAAAKCRNR
120 130 140 150 160 170
150 160 170 180 190 200
pF1KB7 RRELTEKLQAETEELEEEKSGLQKEIAELQKEKEKLEFMLVAHGPVCKISPEERRSPPAP
:::::..:::::..:::::. :..::::::::::.:::.:::: : ::: :: :.:
XP_005 RRELTDRLQAETDQLEEEKAELESEIAELQKEKERLEFVLVAHKPGCKIPYEE---GPGP
180 190 200 210 220 230
210 220 230 240 250 260
pF1KB7 GLQPMRSGGGSVGAVVVKQEPLEEDSPSSSSAGLDKAQRSVIKPISIAGGFYGEEPLHTP
:
XP_005 GPLAE
>>NP_001287785 (OMIM: 136515) fos-related antigen 1 isof (205 aa)
initn: 548 init1: 395 opt: 399 Z-score: 295.1 bits: 62.2 E(85289): 1.1e-09
Smith-Waterman score: 563; 52.4% identity (68.9% similar) in 212 aa overlap (117-326:32-205)
90 100 110 120 130 140
pF1KB7 GLASVPGHMALPRPGVIKTIGTTVGRRRRDEQLSPEEEEKRRIRRERNKLAAAKCRNRRR
.:.::::::.::.::::::::::::::::.
NP_001 FRDFGEPGPSSGNGGGYGGPAQPPAAAQAAQQISPEEEERRRVRRERNKLAAAKCRNRRK
10 20 30 40 50 60
150 160 170 180 190 200
pF1KB7 ELTEKLQAETEELEEEKSGLQKEIAELQKEKEKLEFMLVAHGPVCKISPEERRSPPAPGL
:::. :::::..::.::::::.:: ::::.::.::..: :: :.::: ::
NP_001 ELTDFLQAETDKLEDEKSGLQREIEELQKQKERLELVLEAHRPICKI-PE----------
70 80 90 100 110
210 220 230 240 250 260
pF1KB7 QPMRSGGGSVGAVVVKQEPLEEDSPSSSSAGLDKAQRSVIKPISIAGGFYGE-EPLHTPI
:.. : :. :.:... : . ::.. : : : ::::
NP_001 ------GAKEG-----------DTGSTSGTSSPPAPCRPVPCISLSPGPVLEPEALHTPT
120 130 140 150
270 280 290 300 310 320
pF1KB7 VVTSTPAVTPGTSNLVFTYPSVLEQESPASPSESCSKAHRRSSSS-GDQSSDSLNSPTLL
..: ::..:: : .::::::: .: : :..:::.:::: :: ::: :.:::::
NP_001 LMT-TPSLTPFTPSLVFTYPS--------TP-EPCASAHRKSSSSSGDPSSDPLGSPTLL
160 170 180 190 200
pF1KB7 AL
::
NP_001 AL
326 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 10:23:01 2016 done: Sat Nov 5 10:23:02 2016
Total Scan time: 8.050 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]