FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1470, 181 aa 1>>>pF1KE1470 181 - 181 aa - 181 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3882+/-0.00085; mu= 11.7276+/- 0.051 mean_var=56.3156+/-10.943, 0's: 0 Z-trim(105.6): 40 B-trim: 0 in 0/50 Lambda= 0.170907 statistics sampled from 8465 (8504) to 8465 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.656), E-opt: 0.2 (0.261), width: 16 Scan time: 1.860 The best scores are: opt bits E(32554) CCDS46983.1 FGF12 gene_id:2257|Hs108|chr3 ( 181) 1195 302.6 8.5e-83 CCDS3301.1 FGF12 gene_id:2257|Hs108|chr3 ( 243) 1171 296.7 6.8e-81 CCDS9501.1 FGF14 gene_id:2259|Hs108|chr13 ( 247) 926 236.3 1.1e-62 CCDS9500.1 FGF14 gene_id:2259|Hs108|chr13 ( 252) 922 235.3 2.1e-62 CCDS55512.1 FGF13 gene_id:2258|Hs108|chrX ( 199) 856 219.0 1.4e-57 CCDS55511.1 FGF13 gene_id:2258|Hs108|chrX ( 226) 851 217.8 3.6e-57 CCDS55513.1 FGF13 gene_id:2258|Hs108|chrX ( 255) 851 217.8 4e-57 CCDS14664.1 FGF13 gene_id:2258|Hs108|chrX ( 192) 845 216.3 8.6e-57 CCDS14665.1 FGF13 gene_id:2258|Hs108|chrX ( 245) 845 216.4 1.1e-56 CCDS11105.1 FGF11 gene_id:2256|Hs108|chr17 ( 225) 705 181.8 2.4e-46 CCDS9298.1 FGF9 gene_id:2254|Hs108|chr13 ( 208) 385 102.9 1.3e-22 CCDS5998.1 FGF20 gene_id:26281|Hs108|chr8 ( 211) 383 102.4 1.8e-22 CCDS75996.1 FGF16 gene_id:8823|Hs108|chrX ( 207) 369 99.0 2e-21 CCDS3950.1 FGF10 gene_id:2255|Hs108|chr5 ( 208) 317 86.1 1.4e-17 CCDS34021.1 FGF5 gene_id:2250|Hs108|chr4 ( 268) 314 85.4 3e-17 CCDS10131.1 FGF7 gene_id:2252|Hs108|chr15 ( 194) 298 81.5 3.4e-16 CCDS12037.1 FGF22 gene_id:27006|Hs108|chr19 ( 170) 296 80.9 4.3e-16 CCDS8527.1 FGF6 gene_id:2251|Hs108|chr12 ( 208) 291 79.7 1.2e-15 CCDS8194.1 FGF4 gene_id:2249|Hs108|chr11 ( 206) 278 76.5 1.1e-14 CCDS4275.1 FGF1 gene_id:2246|Hs108|chr5 ( 155) 263 72.8 1.1e-13 CCDS8195.1 FGF3 gene_id:2248|Hs108|chr11 ( 239) 233 65.5 2.8e-11 CCDS34059.1 FGF2 gene_id:2247|Hs108|chr4 ( 288) 233 65.5 3.3e-11 >>CCDS46983.1 FGF12 gene_id:2257|Hs108|chr3 (181 aa) initn: 1195 init1: 1195 opt: 1195 Z-score: 1599.9 bits: 302.6 E(32554): 8.5e-83 Smith-Waterman score: 1195; 99.4% identity (99.4% similar) in 181 aa overlap (1-181:1-181) 10 20 30 40 50 60 pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTIDGTKDENSDYTLFNLIPVGLRVVAIQGVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTIDGTKDENSDYTLFNLIPVGLRVVAIQGVK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 ASLYVAMNGEGYLYSSDVFTPECKFKESVFENYYVIYSSTLYRQQESGRAWFLGLNKEGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 ASLYVAMNGEGYLYSSDVFTPECKFKESVFENYYVIYSSTLYRQQESGRAWFLGLNKEGQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 IMKGNRVKKTKPSSHFVPKPIEVCMYREQSLHEIGEKQGRSRKSSGTPTMNGGKVVNQDS :::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::: CCDS46 IMKGNRVKKTKPSSHFVPKPIEVCMYREPSLHEIGEKQGRSRKSSGTPTMNGGKVVNQDS 130 140 150 160 170 180 pF1KE1 T : CCDS46 T >>CCDS3301.1 FGF12 gene_id:2257|Hs108|chr3 (243 aa) initn: 1171 init1: 1171 opt: 1171 Z-score: 1565.8 bits: 296.7 E(32554): 6.8e-81 Smith-Waterman score: 1171; 99.4% identity (99.4% similar) in 177 aa overlap (5-181:67-243) 10 20 30 pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTIDGT :::::::::::::::::::::::::::::: CCDS33 GRSLCERHVLGVFSKVRFCSGRKRPVRRRPEPQLKGIVTRLFSQQGYFLQMHPDGTIDGT 40 50 60 70 80 90 40 50 60 70 80 90 pF1KE1 KDENSDYTLFNLIPVGLRVVAIQGVKASLYVAMNGEGYLYSSDVFTPECKFKESVFENYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 KDENSDYTLFNLIPVGLRVVAIQGVKASLYVAMNGEGYLYSSDVFTPECKFKESVFENYY 100 110 120 130 140 150 100 110 120 130 140 150 pF1KE1 VIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYREQSLHEI :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: CCDS33 VIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYREPSLHEI 160 170 180 190 200 210 160 170 180 pF1KE1 GEKQGRSRKSSGTPTMNGGKVVNQDST ::::::::::::::::::::::::::: CCDS33 GEKQGRSRKSSGTPTMNGGKVVNQDST 220 230 240 >>CCDS9501.1 FGF14 gene_id:2259|Hs108|chr13 (247 aa) initn: 917 init1: 879 opt: 926 Z-score: 1239.2 bits: 236.3 E(32554): 1.1e-62 Smith-Waterman score: 926; 73.1% identity (90.3% similar) in 186 aa overlap (1-181:61-246) 10 20 30 pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGT .. ..::::::::::. .:::.:::::::. CCDS95 SSPSKNRGLCNGNLVDIFSKVRIFGLKKRRLRRQDPQLKGIVTRLYCRQGYYLQMHPDGA 40 50 60 70 80 90 40 50 60 70 80 90 pF1KE1 IDGTKDENSDYTLFNLIPVGLRVVAIQGVKASLYVAMNGEGYLYSSDVFTPECKFKESVF .:::::.... :::::::::::::::::::..::.::::::::: :..:::::::::::: CCDS95 LDGTKDDSTNSTLFNLIPVGLRVVAIQGVKTGLYIAMNGEGYLYPSELFTPECKFKESVF 100 110 120 130 140 150 100 110 120 130 140 150 pF1KE1 ENYYVIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYREQS ::::::::: :::::::::::::::::::: :::::::::::..::.:::.:: :::: : CCDS95 ENYYVIYSSMLYRQQESGRAWFLGLNKEGQAMKGNRVKKTKPAAHFLPKPLEVAMYREPS 160 170 180 190 200 210 160 170 180 pF1KE1 LHEIGE---KQGR--SRKSSGTPTMNGGKVVNQDST ::..:: : : :...:.. ::::: ::...: CCDS95 LHDVGETVPKPGVTPSKSTSASAIMNGGKPVNKSKTT 220 230 240 >>CCDS9500.1 FGF14 gene_id:2259|Hs108|chr13 (252 aa) initn: 913 init1: 875 opt: 922 Z-score: 1233.8 bits: 235.3 E(32554): 2.1e-62 Smith-Waterman score: 922; 74.7% identity (90.7% similar) in 182 aa overlap (5-181:70-251) 10 20 30 pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTIDGT .::::::::::. .:::.:::::::..::: CCDS95 MWFLWNIFSKGTHMLQCLCGKSLKKNKNPTDPQLKGIVTRLYCRQGYYLQMHPDGALDGT 40 50 60 70 80 90 40 50 60 70 80 90 pF1KE1 KDENSDYTLFNLIPVGLRVVAIQGVKASLYVAMNGEGYLYSSDVFTPECKFKESVFENYY ::.... :::::::::::::::::::..::.::::::::: :..:::::::::::::::: CCDS95 KDDSTNSTLFNLIPVGLRVVAIQGVKTGLYIAMNGEGYLYPSELFTPECKFKESVFENYY 100 110 120 130 140 150 100 110 120 130 140 150 pF1KE1 VIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYREQSLHEI ::::: :::::::::::::::::::: :::::::::::..::.:::.:: :::: :::.. CCDS95 VIYSSMLYRQQESGRAWFLGLNKEGQAMKGNRVKKTKPAAHFLPKPLEVAMYREPSLHDV 160 170 180 190 200 210 160 170 180 pF1KE1 GE---KQGR--SRKSSGTPTMNGGKVVNQDST :: : : :...:.. ::::: ::...: CCDS95 GETVPKPGVTPSKSTSASAIMNGGKPVNKSKTT 220 230 240 250 >>CCDS55512.1 FGF13 gene_id:2258|Hs108|chrX (199 aa) initn: 887 init1: 820 opt: 856 Z-score: 1147.5 bits: 219.0 E(32554): 1.4e-57 Smith-Waterman score: 856; 68.4% identity (88.2% similar) in 187 aa overlap (3-181:15-198) 10 20 30 40 pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTIDGTKDENSDYTLFNLIP :::::::::::.:.:.::: ::.. ::::::::::.: :::::::: CCDS55 MSGKVTKPKEEKDASKEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKDEDSTYTLFNLIP 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE1 VGLRVVAIQGVKASLYVAMNGEGYLYSSDVFTPECKFKESVFENYYVIYSSTLYRQQESG :::::::::::...::.:::.:::::.:..::::::::::::::::: ::: .::::.:: CCDS55 VGLRVVAIQGVQTKLYLAMNSEGYLYTSELFTPECKFKESVFENYYVTYSSMIYRQQQSG 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE1 RAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYREQSLHEIGEKQGRSRKSSGTP :.:.:::::::.:::::.:::.::..::.:::..: ::.: :::.. : ::..:::: CCDS55 RGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTE---FSRSGSGTP 130 140 150 160 170 170 180 pF1KE1 T--------MNGGKVVNQDST : .:::: .... . CCDS55 TKSRSVSGVLNGGKSMSHNEST 180 190 >>CCDS55511.1 FGF13 gene_id:2258|Hs108|chrX (226 aa) initn: 876 init1: 809 opt: 851 Z-score: 1139.9 bits: 217.8 E(32554): 3.6e-57 Smith-Waterman score: 851; 67.6% identity (87.8% similar) in 188 aa overlap (2-181:41-225) 10 20 30 pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTI : .:::::::::.:.:.::: ::.. :::: CCDS55 ELKKKESPFRAKCHEIFCCPLKQVHHKENTEPEEPQLKGIVTKLYSRQGYHLQLQADGTI 20 30 40 50 60 70 40 50 60 70 80 90 pF1KE1 DGTKDENSDYTLFNLIPVGLRVVAIQGVKASLYVAMNGEGYLYSSDVFTPECKFKESVFE ::::::.: :::::::::::::::::::...::.:::.:::::.:..::::::::::::: CCDS55 DGTKDEDSTYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSELFTPECKFKESVFE 80 90 100 110 120 130 100 110 120 130 140 150 pF1KE1 NYYVIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYREQSL :::: ::: .::::.:::.:.:::::::.:::::.:::.::..::.:::..: ::.: :: CCDS55 NYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSL 140 150 160 170 180 190 160 170 180 pF1KE1 HEIGEKQGRSRKSSGTPT--------MNGGKVVNQDST :.. : ::..::::: .:::: .... . CCDS55 HDLTE---FSRSGSGTPTKSRSVSGVLNGGKSMSHNEST 200 210 220 >>CCDS55513.1 FGF13 gene_id:2258|Hs108|chrX (255 aa) initn: 876 init1: 809 opt: 851 Z-score: 1139.1 bits: 217.8 E(32554): 4e-57 Smith-Waterman score: 851; 67.6% identity (87.8% similar) in 188 aa overlap (2-181:70-254) 10 20 30 pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTI : .:::::::::.:.:.::: ::.. :::: CCDS55 ELKKKESPFRAKCHEIFCCPLKQVHHKENTEPEEPQLKGIVTKLYSRQGYHLQLQADGTI 40 50 60 70 80 90 40 50 60 70 80 90 pF1KE1 DGTKDENSDYTLFNLIPVGLRVVAIQGVKASLYVAMNGEGYLYSSDVFTPECKFKESVFE ::::::.: :::::::::::::::::::...::.:::.:::::.:..::::::::::::: CCDS55 DGTKDEDSTYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSELFTPECKFKESVFE 100 110 120 130 140 150 100 110 120 130 140 150 pF1KE1 NYYVIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYREQSL :::: ::: .::::.:::.:.:::::::.:::::.:::.::..::.:::..: ::.: :: CCDS55 NYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSL 160 170 180 190 200 210 160 170 180 pF1KE1 HEIGEKQGRSRKSSGTPT--------MNGGKVVNQDST :.. : ::..::::: .:::: .... . CCDS55 HDLTE---FSRSGSGTPTKSRSVSGVLNGGKSMSHNEST 220 230 240 250 >>CCDS14664.1 FGF13 gene_id:2258|Hs108|chrX (192 aa) initn: 859 init1: 809 opt: 845 Z-score: 1133.1 bits: 216.3 E(32554): 8.6e-57 Smith-Waterman score: 845; 68.1% identity (88.1% similar) in 185 aa overlap (5-181:10-191) 10 20 30 40 50 pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTIDGTKDENSDYTLFNLIPVGLRVVA :::::::::.:.:.::: ::.. ::::::::::.: ::::::::::::::: CCDS14 MALLRKSYSEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKDEDSTYTLFNLIPVGLRVVA 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 IQGVKASLYVAMNGEGYLYSSDVFTPECKFKESVFENYYVIYSSTLYRQQESGRAWFLGL ::::...::.:::.:::::.:..::::::::::::::::: ::: .::::.:::.:.::: CCDS14 IQGVQTKLYLAMNSEGYLYTSELFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGL 70 80 90 100 110 120 120 130 140 150 160 pF1KE1 NKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYREQSLHEIGEKQGRSRKSSGTPT------ ::::.:::::.:::.::..::.:::..: ::.: :::.. : ::..::::: CCDS14 NKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTE---FSRSGSGTPTKSRSVS 130 140 150 160 170 170 180 pF1KE1 --MNGGKVVNQDST .:::: .... . CCDS14 GVLNGGKSMSHNEST 180 190 >>CCDS14665.1 FGF13 gene_id:2258|Hs108|chrX (245 aa) initn: 876 init1: 809 opt: 845 Z-score: 1131.3 bits: 216.4 E(32554): 1.1e-56 Smith-Waterman score: 845; 68.1% identity (88.1% similar) in 185 aa overlap (5-181:63-244) 10 20 30 pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTIDGT :::::::::.:.:.::: ::.. ::::::: CCDS14 KGKTSCDKNKLNVFSRVKLFGSKKRRRRRPEPQLKGIVTKLYSRQGYHLQLQADGTIDGT 40 50 60 70 80 90 40 50 60 70 80 90 pF1KE1 KDENSDYTLFNLIPVGLRVVAIQGVKASLYVAMNGEGYLYSSDVFTPECKFKESVFENYY :::.: :::::::::::::::::::...::.:::.:::::.:..:::::::::::::::: CCDS14 KDEDSTYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSELFTPECKFKESVFENYY 100 110 120 130 140 150 100 110 120 130 140 150 pF1KE1 VIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYREQSLHEI : ::: .::::.:::.:.:::::::.:::::.:::.::..::.:::..: ::.: :::.. CCDS14 VTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDL 160 170 180 190 200 210 160 170 180 pF1KE1 GEKQGRSRKSSGTPT--------MNGGKVVNQDST : ::..::::: .:::: .... . CCDS14 TE---FSRSGSGTPTKSRSVSGVLNGGKSMSHNEST 220 230 240 >>CCDS11105.1 FGF11 gene_id:2256|Hs108|chr17 (225 aa) initn: 726 init1: 705 opt: 705 Z-score: 945.4 bits: 181.8 E(32554): 2.4e-46 Smith-Waterman score: 705; 65.6% identity (87.3% similar) in 157 aa overlap (5-161:65-221) 10 20 30 pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTIDGT :::::::::.:: .::..:: .:::.:.:: CCDS11 TKSLCQKQLLILLSKVRLCGGRPARPDRGPEPQLKGIVTKLFCRQGFYLQANPDGSIQGT 40 50 60 70 80 90 40 50 60 70 80 90 pF1KE1 KDENSDYTLFNLIPVGLRVVAIQGVKASLYVAMNGEGYLYSSDVFTPECKFKESVFENYY ...:..: :::::::::::.::..: . :.:::.:: :::: :: ::.::: :::::: CCDS11 PEDTSSFTHFNLIPVGLRVVTIQSAKLGHYMAMNAEGLLYSSPHFTAECRFKECVFENYY 100 110 120 130 140 150 100 110 120 130 140 150 pF1KE1 VIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYREQSLHEI :.:.:.::::..:::::.:::.::::.:::::::::: ..::.:: .:: ::.: ::: . CCDS11 VLYASALYRQRRSGRAWYLGLDKEGQVMKGNRVKKTKAAAHFLPKLLEVAMYQEPSLHSV 160 170 180 190 200 210 160 170 180 pF1KE1 GEKQGRSRKSSGTPTMNGGKVVNQDST : . : CCDS11 PEASPSSPPAP 220 181 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 00:38:42 2016 done: Mon Nov 7 00:38:42 2016 Total Scan time: 1.860 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]