(Linear) (Six-base) MAPSORT of: KIEE4560.seq Check: 3998 from: 1 to: 2055 KIEE4560.orf With 182 enzymes: SgfI * March 22, 2012 18:22 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 0 1050 2055 Size: 1050 1005 AccI GT'mk_AC Cuts at: 0 1668 2044 2055 Size: 1668 376 11 Fragments arranged by size: 1668 376 11 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 26 151 1169 1580 2055 Size: 26 125 1018 411 475 Fragments arranged by size: 1018 475 411 125 26 AleI CACnn'nnGTG Cuts at: 0 647 1060 2055 Size: 647 413 995 Fragments arranged by size: 995 647 413 AloI GAACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 202 234 2055 Size: 202 32 1821 Fragments arranged by size: 1821 202 32 AlwNI CAG_nnn'CTG Cuts at: 0 1703 2055 Size: 1703 352 ApaI G_GGCC'C Cuts at: 0 365 2055 Size: 365 1690 ApoI r'AATT_y Cuts at: 0 855 893 949 1791 2055 Size: 855 38 56 842 264 Fragments arranged by size: 855 842 264 56 38 AseI AT'TA_AT Cuts at: 0 619 1499 2055 Size: 619 880 556 Fragments arranged by size: 880 619 556 AvaI C'yCGr_G Cuts at: 0 254 2055 Size: 254 1801 BamHI G'GATC_C Cuts at: 0 105 2055 Size: 105 1950 BanII G_rGCy'C Cuts at: 0 170 365 1124 2055 Size: 170 195 759 931 Fragments arranged by size: 931 759 195 170 BbsI GAAGACnn'nnnn_ Cuts at: 0 89 2055 Size: 89 1966 BbvCI CC'TCA_GC Cuts at: 0 1237 2055 Size: 1237 818 BglII A'GATC_T Cuts at: 0 374 420 2055 Size: 374 46 1635 Fragments arranged by size: 1635 374 46 Bme1580I G_kGCm'C Cuts at: 0 365 2055 Size: 365 1690 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 1951 2055 Size: 1951 104 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 112 768 2055 Size: 112 656 1287 Fragments arranged by size: 1287 656 112 Bpu10I CC'TnA_GC Cuts at: 0 1237 2055 Size: 1237 818 BsaHI Gr'CG_yC Cuts at: 0 182 2055 Size: 182 1873 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 202 232 2055 Size: 202 30 1823 Fragments arranged by size: 1823 202 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 1681 2055 Size: 1681 374 BsiHKAI G_wGCw'C Cuts at: 0 299 2055 Size: 299 1756 BsmI GAATG_Cn' Cuts at: 0 1073 2055 Size: 1073 982 Bsp1286I G_dGCh'C Cuts at: 0 170 299 365 1124 2055 Size: 170 129 66 759 931 Fragments arranged by size: 931 759 170 129 66 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 1050 2055 Size: 1050 1005 BsrDI GCAATG_nn' Cuts at: 0 320 2055 Size: 320 1735 BsrGI T'GTAC_A Cuts at: 0 1742 2055 Size: 1742 313 BssSI C'ACGA_G Cuts at: 0 645 2049 2055 Size: 645 1404 6 Fragments arranged by size: 1404 645 6 BstEII G'GTnAC_C Cuts at: 0 1577 2055 Size: 1577 478 BstXI CCAn_nnnn'nTGG Cuts at: 0 229 736 1062 1529 2055 Size: 229 507 326 467 526 Fragments arranged by size: 526 507 467 326 229 BstYI r'GATC_y Cuts at: 0 105 260 374 420 983 2055 Size: 105 155 114 46 563 1072 Fragments arranged by size: 1072 563 155 114 105 46 BstZ17I GTA'TAC Cuts at: 0 2045 2055 Size: 2045 10 BtgI C'CryG_G Cuts at: 0 1100 2055 Size: 1100 955 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 0 285 1954 2055 Size: 285 1669 101 Fragments arranged by size: 1669 285 101 BtsI GCAGTG_nn' Cuts at: 0 1534 2055 Size: 1534 521 ClaI AT'CG_AT Cuts at: 0 626 2055 Size: 626 1429 DraI TTT'AAA Cuts at: 0 464 614 854 2055 Size: 464 150 240 1201 Fragments arranged by size: 1201 464 240 150 DraIII CAC_nnn'GTG Cuts at: 0 1605 2055 Size: 1605 450 EaeI y'GGCC_r Cuts at: 0 231 305 2055 Size: 231 74 1750 Fragments arranged by size: 1750 231 74 EarI CTCTTCn'nnn_ Cuts at: 0 271 2055 Size: 271 1784 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 26 112 151 768 1169 1580 2055 Size: 26 86 39 617 401 411 475 Fragments arranged by size: 617 475 411 401 86 39 26 EcoO109I rG'GnC_Cy Cuts at: 0 361 2055 Size: 361 1694 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 14 46 90 122 968 1000 2055 Size: 14 32 44 32 846 32 1055 Fragments arranged by size: 1055 846 44 32 32 32 14 HincII GTy'rAC Cuts at: 0 1386 2055 Size: 1386 669 MfeI C'AATT_G Cuts at: 0 670 2055 Size: 670 1385 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 658 2055 Size: 658 1397 MscI TGG'CCA Cuts at: 0 233 2055 Size: 233 1822 MslI CAynn'nnrTG Cuts at: 0 34 647 734 1060 1679 2055 Size: 34 613 87 326 619 376 Fragments arranged by size: 619 613 376 326 87 34 NcoI C'CATG_G Cuts at: 0 1100 2055 Size: 1100 955 NspI r_CATG'y Cuts at: 0 1245 1305 1401 2018 2055 Size: 1245 60 96 617 37 Fragments arranged by size: 1245 617 96 60 37 PflMI CCAn_nnn'nTGG Cuts at: 0 761 2055 Size: 761 1294 PfoI T'CCnGG_A Cuts at: 0 539 1007 1288 2055 Size: 539 468 281 767 Fragments arranged by size: 767 539 468 281 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 202 234 2055 Size: 202 32 1821 Fragments arranged by size: 1821 202 32 PsiI TTA'TAA Cuts at: 0 497 2055 Size: 497 1558 PspOMI G'GGCC_C Cuts at: 0 361 2055 Size: 361 1694 SexAI A'CCwGG_T Cuts at: 0 1573 2055 Size: 1573 482 SphI G_CATG'C Cuts at: 0 1245 2018 2055 Size: 1245 773 37 Fragments arranged by size: 1245 773 37 SspI AAT'ATT Cuts at: 0 1464 2055 Size: 1464 591 StyI C'CwwG_G Cuts at: 0 153 206 382 1100 2055 Size: 153 53 176 718 955 Fragments arranged by size: 955 718 176 153 53 SwaI ATTT'AAAT Cuts at: 0 854 2055 Size: 854 1201 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 768 2055 Size: 768 1287 TatI w'GTAC_w Cuts at: 0 1184 1742 2028 2055 Size: 1184 558 286 27 Fragments arranged by size: 1184 558 286 27 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 1320 1352 2055 Size: 1320 32 703 Fragments arranged by size: 1320 703 32 Tth111I GACn'n_nGTC Cuts at: 0 1015 1078 2055 Size: 1015 63 977 Fragments arranged by size: 1015 977 63 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 758 1059 1313 2055 Size: 758 301 254 742 Fragments arranged by size: 758 742 301 254 XmnI GAAnn'nnTTC Cuts at: 0 86 2055 Size: 86 1969 Enzymes that do cut: AarI AccI AcuI AleI AloI AlwNI ApaI ApoI AseI AvaI BamHI BanII BbsI BbvCI BglII Bme1580I BplI BpmI Bpu10I BsaHI BsaXI BseRI BsiHKAI BsmI Bsp1286I BspMI BsrDI BsrGI BssSI BstEII BstXI BstYI BstZ17I BtgI BtgZI BtsI ClaI DraI DraIII EaeI EarI Eco57MI EcoO109I Hin4I HincII MfeI MmeI MscI MslI NcoI NspI PflMI PfoI PpiI PsiI PspOMI SexAI SphI SspI StyI SwaI TaqII TatI TstI Tth111I XcmI XmnI Enzymes that do not cut: AatII Acc65I AclI AfeI AflII AflIII AgeI AhdI AlfI ApaLI AscI AsiSI AvrII BaeI BanI BbeI BcgI BciVI BclI BfrBI BglI BlpI BmgBI BmrI BmtI BpuEI BsaI BsaAI BsaBI BsaWI BseYI BsgI BsiEI BsiWI BsmBI BspEI BspHI BsrBI BsrFI BssHII BstAPI BstBI Bsu36I CspCI DrdI EagI EciI EcoICRI EcoNI EcoRI EcoRV FalI FseI FspI FspAI HaeII HindIII HpaI KasI KpnI MluI MspA1I NaeI NarI NdeI NgoMIV NheI NotI NruI NsiI PacI PasI PciI PmeI PmlI PpuMI PshAI PspXI PsrI PstI PvuI PvuII RsrII SacI SacII SalI SanDI SapI SbfI ScaI SfcI SfiI SfoI SgfI SgrAI SmaI SmlI SnaBI SpeI SrfI StuI XbaI XhoI XmaI ZraI