FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4422, 437 aa 1>>>pF1KE4422 437 - 437 aa - 437 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1740+/-0.000361; mu= 18.5913+/- 0.022 mean_var=69.0652+/-14.428, 0's: 0 Z-trim(114.6): 31 B-trim: 1197 in 1/54 Lambda= 0.154328 statistics sampled from 24555 (24586) to 24555 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.655), E-opt: 0.2 (0.288), width: 16 Scan time: 8.800 The best scores are: opt bits E(85289) NP_003910 (OMIM: 159900,604149) epsilon-sarcoglyca ( 437) 2980 672.5 5.8e-193 XP_011514967 (OMIM: 159900,604149) PREDICTED: epsi ( 467) 2941 663.9 2.5e-190 NP_001092871 (OMIM: 159900,604149) epsilon-sarcogl ( 462) 2838 640.9 2e-183 XP_016868254 (OMIM: 159900,604149) PREDICTED: epsi ( 408) 2709 612.2 8e-175 XP_005250732 (OMIM: 159900,604149) PREDICTED: epsi ( 473) 2709 612.2 9e-175 XP_016868252 (OMIM: 159900,604149) PREDICTED: epsi ( 438) 2670 603.5 3.5e-172 XP_011514969 (OMIM: 159900,604149) PREDICTED: epsi ( 438) 2670 603.5 3.5e-172 XP_011514965 (OMIM: 159900,604149) PREDICTED: epsi ( 503) 2670 603.5 3.9e-172 NP_001288068 (OMIM: 159900,604149) epsilon-sarcogl ( 396) 2430 550.0 3.9e-156 XP_016868253 (OMIM: 159900,604149) PREDICTED: epsi ( 428) 2360 534.5 2e-151 NP_001092870 (OMIM: 159900,604149) epsilon-sarcogl ( 451) 2360 534.5 2.1e-151 XP_011514968 (OMIM: 159900,604149) PREDICTED: epsi ( 458) 2360 534.5 2.2e-151 XP_016868257 (OMIM: 159900,604149) PREDICTED: epsi ( 346) 2339 529.7 4.4e-150 XP_011514971 (OMIM: 159900,604149) PREDICTED: epsi ( 376) 2300 521.1 1.9e-147 XP_016868255 (OMIM: 159900,604149) PREDICTED: epsi ( 399) 2089 474.1 2.8e-133 XP_005250734 (OMIM: 159900,604149) PREDICTED: epsi ( 464) 2089 474.2 3.2e-133 XP_011514966 (OMIM: 159900,604149) PREDICTED: epsi ( 494) 2089 474.2 3.3e-133 XP_016868258 (OMIM: 159900,604149) PREDICTED: epsi ( 337) 1719 391.7 1.6e-108 XP_016868256 (OMIM: 159900,604149) PREDICTED: epsi ( 367) 1719 391.7 1.7e-108 NP_000014 (OMIM: 600119,608099) alpha-sarcoglycan ( 387) 1082 249.9 8.6e-66 XP_011523422 (OMIM: 600119,608099) PREDICTED: alph ( 467) 1055 243.9 6.4e-64 XP_011523426 (OMIM: 600119,608099) PREDICTED: alph ( 311) 852 198.6 1.9e-50 XP_016868259 (OMIM: 159900,604149) PREDICTED: epsi ( 224) 803 187.6 2.8e-47 XP_011523424 (OMIM: 600119,608099) PREDICTED: alph ( 375) 702 165.3 2.5e-40 XP_016880439 (OMIM: 600119,608099) PREDICTED: alph ( 324) 699 164.6 3.5e-40 XP_011523423 (OMIM: 600119,608099) PREDICTED: alph ( 417) 545 130.4 8.9e-30 XP_011523425 (OMIM: 600119,608099) PREDICTED: alph ( 343) 512 123.0 1.2e-27 NP_001129169 (OMIM: 600119,608099) alpha-sarcoglyc ( 263) 505 121.3 3e-27 >>NP_003910 (OMIM: 159900,604149) epsilon-sarcoglycan is (437 aa) initn: 2980 init1: 2980 opt: 2980 Z-score: 3585.3 bits: 672.5 E(85289): 5.8e-193 Smith-Waterman score: 2980; 99.5% identity (99.8% similar) in 437 aa overlap (1-437:1-437) 10 20 30 40 50 60 pF1KE4 MQLPRWWELGDPCAWTGQGRGTRRMSPATTGTFLLTVYSIFSKVHSDRSVYPSAGVLFVH ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: NP_003 MQLPRWWELGDPCAWTGQGRGTRRMSPATTGTFLLTVYSIFSKVHSDRNVYPSAGVLFVH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 VLEREYFKGEFPPYPKPGEISNDPITFNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 VLEREYFKGEFPPYPKPGEISNDPITFNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 ENVGKPTIIEITAYNRRTFETARHNLIINIMSAEDFPLPYQAEFFIKNMNVEEMLASEVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 ENVGKPTIIEITAYNRRTFETARHNLIINIMSAEDFPLPYQAEFFIKNMNVEEMLASEVL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 GDFLGAVKNVWQPERLNAINITSALDRGGRVPLPINDLKEGVYVMVGADVPFSSCLREVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 GDFLGAVKNVWQPERLNAINITSALDRGGRVPLPINDLKEGVYVMVGADVPFSSCLREVE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 NPQNQLRCSQEMEPVITCDKKFRTQFYIDWCKISLVDKTKQVSTYQEVIRGEGILPDGGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 NPQNQLRCSQEMEPVITCDKKFRTQFYIDWCKISLVDKTKQVSTYQEVIRGEGILPDGGE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 YKPPSDSLKSRDYYTDFLITLAVPSAVALVLFLILAYIMCCRREGVEKRNMQTPDIQLVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 YKPPSDSLKSRDYYTDFLITLAVPSAVALVLFLILAYIMCCRREGVEKRNMQTPDIQLVH 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 HSAIQKSTKELRDMSKNREIAWPLSTLPVFHPVTGEIIHPLHTDNYDSTNMPLMQTQQNL :::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::: NP_003 HSAIQKSTKELRDMSKNREIAWPLSTLPVFHPVTGEIIPPLHTDNYDSTNMPLMQTQQNL 370 380 390 400 410 420 430 pF1KE4 PHQTQIPQQQTTGKWYP ::::::::::::::::: NP_003 PHQTQIPQQQTTGKWYP 430 >>XP_011514967 (OMIM: 159900,604149) PREDICTED: epsilon- (467 aa) initn: 2941 init1: 2941 opt: 2941 Z-score: 3537.9 bits: 663.9 E(85289): 2.5e-190 Smith-Waterman score: 2941; 99.5% identity (99.8% similar) in 433 aa overlap (1-433:1-433) 10 20 30 40 50 60 pF1KE4 MQLPRWWELGDPCAWTGQGRGTRRMSPATTGTFLLTVYSIFSKVHSDRSVYPSAGVLFVH ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: XP_011 MQLPRWWELGDPCAWTGQGRGTRRMSPATTGTFLLTVYSIFSKVHSDRNVYPSAGVLFVH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 VLEREYFKGEFPPYPKPGEISNDPITFNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VLEREYFKGEFPPYPKPGEISNDPITFNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 ENVGKPTIIEITAYNRRTFETARHNLIINIMSAEDFPLPYQAEFFIKNMNVEEMLASEVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ENVGKPTIIEITAYNRRTFETARHNLIINIMSAEDFPLPYQAEFFIKNMNVEEMLASEVL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 GDFLGAVKNVWQPERLNAINITSALDRGGRVPLPINDLKEGVYVMVGADVPFSSCLREVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GDFLGAVKNVWQPERLNAINITSALDRGGRVPLPINDLKEGVYVMVGADVPFSSCLREVE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 NPQNQLRCSQEMEPVITCDKKFRTQFYIDWCKISLVDKTKQVSTYQEVIRGEGILPDGGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 NPQNQLRCSQEMEPVITCDKKFRTQFYIDWCKISLVDKTKQVSTYQEVIRGEGILPDGGE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 YKPPSDSLKSRDYYTDFLITLAVPSAVALVLFLILAYIMCCRREGVEKRNMQTPDIQLVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 YKPPSDSLKSRDYYTDFLITLAVPSAVALVLFLILAYIMCCRREGVEKRNMQTPDIQLVH 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 HSAIQKSTKELRDMSKNREIAWPLSTLPVFHPVTGEIIHPLHTDNYDSTNMPLMQTQQNL :::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::: XP_011 HSAIQKSTKELRDMSKNREIAWPLSTLPVFHPVTGEIIPPLHTDNYDSTNMPLMQTQQNL 370 380 390 400 410 420 430 pF1KE4 PHQTQIPQQQTTGKWYP ::::::::::::: XP_011 PHQTQIPQQQTTGDFRLTTFQRFEASIMKLFIRFQLQDVYQNFSLQF 430 440 450 460 >>NP_001092871 (OMIM: 159900,604149) epsilon-sarcoglycan (462 aa) initn: 2836 init1: 2836 opt: 2838 Z-score: 3414.1 bits: 640.9 E(85289): 2e-183 Smith-Waterman score: 2920; 94.2% identity (94.4% similar) in 462 aa overlap (1-437:1-462) 10 20 30 40 50 60 pF1KE4 MQLPRWWELGDPCAWTGQGRGTRRMSPATTGTFLLTVYSIFSKVHSDRSVYPSAGVLFVH ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: NP_001 MQLPRWWELGDPCAWTGQGRGTRRMSPATTGTFLLTVYSIFSKVHSDRNVYPSAGVLFVH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 VLEREYFKGEFPPYPKPGEISNDPITFNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VLEREYFKGEFPPYPKPGEISNDPITFNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 ENVGKPTIIEITAYNRRTFETARHNLIINIMSAEDFPLPYQAEFFIKNMNVEEMLASEVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ENVGKPTIIEITAYNRRTFETARHNLIINIMSAEDFPLPYQAEFFIKNMNVEEMLASEVL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 GDFLGAVKNVWQPERLNAINITSALDRGGRVPLPINDLKEGVYVMVGADVPFSSCLREVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GDFLGAVKNVWQPERLNAINITSALDRGGRVPLPINDLKEGVYVMVGADVPFSSCLREVE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 NPQNQLRCSQEMEPVITCDKKFRTQFYIDWCKISLVDKTKQVSTYQEVIRGEGILPDGGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NPQNQLRCSQEMEPVITCDKKFRTQFYIDWCKISLVDKTKQVSTYQEVIRGEGILPDGGE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 YKPPSDSLKSRDYYTDFLITLAVPSAVALVLFLILAYIMCCRREGVEKRNMQTPDIQLVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 YKPPSDSLKSRDYYTDFLITLAVPSAVALVLFLILAYIMCCRREGVEKRNMQTPDIQLVH 310 320 330 340 350 360 370 380 390 400 410 pF1KE4 HSAIQKSTKELRDMSKNREIAWPLSTLPVFHPVTGEIIHPLHTDNYDSTNMPLMQTQQ-- :::::::::::::::::::::::::::::::::::::: ::::::::::::::::::: NP_001 HSAIQKSTKELRDMSKNREIAWPLSTLPVFHPVTGEIIPPLHTDNYDSTNMPLMQTQQWS 370 380 390 400 410 420 420 430 pF1KE4 -----------------------NLPHQTQIPQQQTTGKWYP ::::::::::::::::::: NP_001 FAPVAQAGVQWSDLGSLQPPPPRNLPHQTQIPQQQTTGKWYP 430 440 450 460 >>XP_016868254 (OMIM: 159900,604149) PREDICTED: epsilon- (408 aa) initn: 2709 init1: 2709 opt: 2709 Z-score: 3259.6 bits: 612.2 E(85289): 8e-175 Smith-Waterman score: 2709; 99.5% identity (99.8% similar) in 401 aa overlap (37-437:8-408) 10 20 30 40 50 60 pF1KE4 WELGDPCAWTGQGRGTRRMSPATTGTFLLTVYSIFSKVHSDRSVYPSAGVLFVHVLEREY ::::::::::::.::::::::::::::::: XP_016 MAAGMKDVYSIFSKVHSDRNVYPSAGVLFVHVLEREY 10 20 30 70 80 90 100 110 120 pF1KE4 FKGEFPPYPKPGEISNDPITFNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTAENVGKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FKGEFPPYPKPGEISNDPITFNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTAENVGKP 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE4 TIIEITAYNRRTFETARHNLIINIMSAEDFPLPYQAEFFIKNMNVEEMLASEVLGDFLGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TIIEITAYNRRTFETARHNLIINIMSAEDFPLPYQAEFFIKNMNVEEMLASEVLGDFLGA 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE4 VKNVWQPERLNAINITSALDRGGRVPLPINDLKEGVYVMVGADVPFSSCLREVENPQNQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VKNVWQPERLNAINITSALDRGGRVPLPINDLKEGVYVMVGADVPFSSCLREVENPQNQL 160 170 180 190 200 210 250 260 270 280 290 300 pF1KE4 RCSQEMEPVITCDKKFRTQFYIDWCKISLVDKTKQVSTYQEVIRGEGILPDGGEYKPPSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RCSQEMEPVITCDKKFRTQFYIDWCKISLVDKTKQVSTYQEVIRGEGILPDGGEYKPPSD 220 230 240 250 260 270 310 320 330 340 350 360 pF1KE4 SLKSRDYYTDFLITLAVPSAVALVLFLILAYIMCCRREGVEKRNMQTPDIQLVHHSAIQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SLKSRDYYTDFLITLAVPSAVALVLFLILAYIMCCRREGVEKRNMQTPDIQLVHHSAIQK 280 290 300 310 320 330 370 380 390 400 410 420 pF1KE4 STKELRDMSKNREIAWPLSTLPVFHPVTGEIIHPLHTDNYDSTNMPLMQTQQNLPHQTQI :::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::: XP_016 STKELRDMSKNREIAWPLSTLPVFHPVTGEIIPPLHTDNYDSTNMPLMQTQQNLPHQTQI 340 350 360 370 380 390 430 pF1KE4 PQQQTTGKWYP ::::::::::: XP_016 PQQQTTGKWYP 400 >>XP_005250732 (OMIM: 159900,604149) PREDICTED: epsilon- (473 aa) initn: 2709 init1: 2709 opt: 2709 Z-score: 3258.7 bits: 612.2 E(85289): 9e-175 Smith-Waterman score: 2869; 91.9% identity (92.1% similar) in 469 aa overlap (5-437:5-473) 10 20 30 pF1KE4 MQLPRWWELGDPCAWTGQGRGTRRMSPATTGTFLLT------------------------ :::::::::::::::::::::::::::::::: XP_005 MQLPRWWELGDPCAWTGQGRGTRRMSPATTGTFLLTAFLLSCADGINGTVNWKTRQANNF 10 20 30 40 50 60 40 50 60 70 80 pF1KE4 ------------VYSIFSKVHSDRSVYPSAGVLFVHVLEREYFKGEFPPYPKPGEISNDP ::::::::::::.::::::::::::::::::::::::::::::::::: XP_005 IISRKMAAGMKDVYSIFSKVHSDRNVYPSAGVLFVHVLEREYFKGEFPPYPKPGEISNDP 70 80 90 100 110 120 90 100 110 120 130 140 pF1KE4 ITFNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTAENVGKPTIIEITAYNRRTFETARH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 ITFNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTAENVGKPTIIEITAYNRRTFETARH 130 140 150 160 170 180 150 160 170 180 190 200 pF1KE4 NLIINIMSAEDFPLPYQAEFFIKNMNVEEMLASEVLGDFLGAVKNVWQPERLNAINITSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 NLIINIMSAEDFPLPYQAEFFIKNMNVEEMLASEVLGDFLGAVKNVWQPERLNAINITSA 190 200 210 220 230 240 210 220 230 240 250 260 pF1KE4 LDRGGRVPLPINDLKEGVYVMVGADVPFSSCLREVENPQNQLRCSQEMEPVITCDKKFRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LDRGGRVPLPINDLKEGVYVMVGADVPFSSCLREVENPQNQLRCSQEMEPVITCDKKFRT 250 260 270 280 290 300 270 280 290 300 310 320 pF1KE4 QFYIDWCKISLVDKTKQVSTYQEVIRGEGILPDGGEYKPPSDSLKSRDYYTDFLITLAVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 QFYIDWCKISLVDKTKQVSTYQEVIRGEGILPDGGEYKPPSDSLKSRDYYTDFLITLAVP 310 320 330 340 350 360 330 340 350 360 370 380 pF1KE4 SAVALVLFLILAYIMCCRREGVEKRNMQTPDIQLVHHSAIQKSTKELRDMSKNREIAWPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SAVALVLFLILAYIMCCRREGVEKRNMQTPDIQLVHHSAIQKSTKELRDMSKNREIAWPL 370 380 390 400 410 420 390 400 410 420 430 pF1KE4 STLPVFHPVTGEIIHPLHTDNYDSTNMPLMQTQQNLPHQTQIPQQQTTGKWYP :::::::::::::: :::::::::::::::::::::::::::::::::::::: XP_005 STLPVFHPVTGEIIPPLHTDNYDSTNMPLMQTQQNLPHQTQIPQQQTTGKWYP 430 440 450 460 470 >>XP_016868252 (OMIM: 159900,604149) PREDICTED: epsilon- (438 aa) initn: 2670 init1: 2670 opt: 2670 Z-score: 3212.2 bits: 603.5 E(85289): 3.5e-172 Smith-Waterman score: 2670; 99.5% identity (99.7% similar) in 397 aa overlap (37-433:8-404) 10 20 30 40 50 60 pF1KE4 WELGDPCAWTGQGRGTRRMSPATTGTFLLTVYSIFSKVHSDRSVYPSAGVLFVHVLEREY ::::::::::::.::::::::::::::::: XP_016 MAAGMKDVYSIFSKVHSDRNVYPSAGVLFVHVLEREY 10 20 30 70 80 90 100 110 120 pF1KE4 FKGEFPPYPKPGEISNDPITFNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTAENVGKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FKGEFPPYPKPGEISNDPITFNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTAENVGKP 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE4 TIIEITAYNRRTFETARHNLIINIMSAEDFPLPYQAEFFIKNMNVEEMLASEVLGDFLGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TIIEITAYNRRTFETARHNLIINIMSAEDFPLPYQAEFFIKNMNVEEMLASEVLGDFLGA 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE4 VKNVWQPERLNAINITSALDRGGRVPLPINDLKEGVYVMVGADVPFSSCLREVENPQNQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VKNVWQPERLNAINITSALDRGGRVPLPINDLKEGVYVMVGADVPFSSCLREVENPQNQL 160 170 180 190 200 210 250 260 270 280 290 300 pF1KE4 RCSQEMEPVITCDKKFRTQFYIDWCKISLVDKTKQVSTYQEVIRGEGILPDGGEYKPPSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RCSQEMEPVITCDKKFRTQFYIDWCKISLVDKTKQVSTYQEVIRGEGILPDGGEYKPPSD 220 230 240 250 260 270 310 320 330 340 350 360 pF1KE4 SLKSRDYYTDFLITLAVPSAVALVLFLILAYIMCCRREGVEKRNMQTPDIQLVHHSAIQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SLKSRDYYTDFLITLAVPSAVALVLFLILAYIMCCRREGVEKRNMQTPDIQLVHHSAIQK 280 290 300 310 320 330 370 380 390 400 410 420 pF1KE4 STKELRDMSKNREIAWPLSTLPVFHPVTGEIIHPLHTDNYDSTNMPLMQTQQNLPHQTQI :::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::: XP_016 STKELRDMSKNREIAWPLSTLPVFHPVTGEIIPPLHTDNYDSTNMPLMQTQQNLPHQTQI 340 350 360 370 380 390 430 pF1KE4 PQQQTTGKWYP ::::::: XP_016 PQQQTTGDFRLTTFQRFEASIMKLFIRFQLQDVYQNFSLQF 400 410 420 430 >>XP_011514969 (OMIM: 159900,604149) PREDICTED: epsilon- (438 aa) initn: 2670 init1: 2670 opt: 2670 Z-score: 3212.2 bits: 603.5 E(85289): 3.5e-172 Smith-Waterman score: 2670; 99.5% identity (99.7% similar) in 397 aa overlap (37-433:8-404) 10 20 30 40 50 60 pF1KE4 WELGDPCAWTGQGRGTRRMSPATTGTFLLTVYSIFSKVHSDRSVYPSAGVLFVHVLEREY ::::::::::::.::::::::::::::::: XP_011 MAAGMKDVYSIFSKVHSDRNVYPSAGVLFVHVLEREY 10 20 30 70 80 90 100 110 120 pF1KE4 FKGEFPPYPKPGEISNDPITFNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTAENVGKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FKGEFPPYPKPGEISNDPITFNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTAENVGKP 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE4 TIIEITAYNRRTFETARHNLIINIMSAEDFPLPYQAEFFIKNMNVEEMLASEVLGDFLGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TIIEITAYNRRTFETARHNLIINIMSAEDFPLPYQAEFFIKNMNVEEMLASEVLGDFLGA 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE4 VKNVWQPERLNAINITSALDRGGRVPLPINDLKEGVYVMVGADVPFSSCLREVENPQNQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VKNVWQPERLNAINITSALDRGGRVPLPINDLKEGVYVMVGADVPFSSCLREVENPQNQL 160 170 180 190 200 210 250 260 270 280 290 300 pF1KE4 RCSQEMEPVITCDKKFRTQFYIDWCKISLVDKTKQVSTYQEVIRGEGILPDGGEYKPPSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RCSQEMEPVITCDKKFRTQFYIDWCKISLVDKTKQVSTYQEVIRGEGILPDGGEYKPPSD 220 230 240 250 260 270 310 320 330 340 350 360 pF1KE4 SLKSRDYYTDFLITLAVPSAVALVLFLILAYIMCCRREGVEKRNMQTPDIQLVHHSAIQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SLKSRDYYTDFLITLAVPSAVALVLFLILAYIMCCRREGVEKRNMQTPDIQLVHHSAIQK 280 290 300 310 320 330 370 380 390 400 410 420 pF1KE4 STKELRDMSKNREIAWPLSTLPVFHPVTGEIIHPLHTDNYDSTNMPLMQTQQNLPHQTQI :::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::: XP_011 STKELRDMSKNREIAWPLSTLPVFHPVTGEIIPPLHTDNYDSTNMPLMQTQQNLPHQTQI 340 350 360 370 380 390 430 pF1KE4 PQQQTTGKWYP ::::::: XP_011 PQQQTTGDFRLTTFQRFEASIMKLFIRFQLQDVYQNFSLQF 400 410 420 430 >>XP_011514965 (OMIM: 159900,604149) PREDICTED: epsilon- (503 aa) initn: 2670 init1: 2670 opt: 2670 Z-score: 3211.4 bits: 603.5 E(85289): 3.9e-172 Smith-Waterman score: 2830; 91.8% identity (92.0% similar) in 465 aa overlap (5-433:5-469) 10 20 30 pF1KE4 MQLPRWWELGDPCAWTGQGRGTRRMSPATTGTFLLT------------------------ :::::::::::::::::::::::::::::::: XP_011 MQLPRWWELGDPCAWTGQGRGTRRMSPATTGTFLLTAFLLSCADGINGTVNWKTRQANNF 10 20 30 40 50 60 40 50 60 70 80 pF1KE4 ------------VYSIFSKVHSDRSVYPSAGVLFVHVLEREYFKGEFPPYPKPGEISNDP ::::::::::::.::::::::::::::::::::::::::::::::::: XP_011 IISRKMAAGMKDVYSIFSKVHSDRNVYPSAGVLFVHVLEREYFKGEFPPYPKPGEISNDP 70 80 90 100 110 120 90 100 110 120 130 140 pF1KE4 ITFNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTAENVGKPTIIEITAYNRRTFETARH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ITFNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTAENVGKPTIIEITAYNRRTFETARH 130 140 150 160 170 180 150 160 170 180 190 200 pF1KE4 NLIINIMSAEDFPLPYQAEFFIKNMNVEEMLASEVLGDFLGAVKNVWQPERLNAINITSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 NLIINIMSAEDFPLPYQAEFFIKNMNVEEMLASEVLGDFLGAVKNVWQPERLNAINITSA 190 200 210 220 230 240 210 220 230 240 250 260 pF1KE4 LDRGGRVPLPINDLKEGVYVMVGADVPFSSCLREVENPQNQLRCSQEMEPVITCDKKFRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LDRGGRVPLPINDLKEGVYVMVGADVPFSSCLREVENPQNQLRCSQEMEPVITCDKKFRT 250 260 270 280 290 300 270 280 290 300 310 320 pF1KE4 QFYIDWCKISLVDKTKQVSTYQEVIRGEGILPDGGEYKPPSDSLKSRDYYTDFLITLAVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 QFYIDWCKISLVDKTKQVSTYQEVIRGEGILPDGGEYKPPSDSLKSRDYYTDFLITLAVP 310 320 330 340 350 360 330 340 350 360 370 380 pF1KE4 SAVALVLFLILAYIMCCRREGVEKRNMQTPDIQLVHHSAIQKSTKELRDMSKNREIAWPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SAVALVLFLILAYIMCCRREGVEKRNMQTPDIQLVHHSAIQKSTKELRDMSKNREIAWPL 370 380 390 400 410 420 390 400 410 420 430 pF1KE4 STLPVFHPVTGEIIHPLHTDNYDSTNMPLMQTQQNLPHQTQIPQQQTTGKWYP :::::::::::::: :::::::::::::::::::::::::::::::::: XP_011 STLPVFHPVTGEIIPPLHTDNYDSTNMPLMQTQQNLPHQTQIPQQQTTGDFRLTTFQRFE 430 440 450 460 470 480 XP_011 ASIMKLFIRFQLQDVYQNFSLQF 490 500 >>NP_001288068 (OMIM: 159900,604149) epsilon-sarcoglycan (396 aa) initn: 2687 init1: 2430 opt: 2430 Z-score: 2924.1 bits: 550.0 E(85289): 3.9e-156 Smith-Waterman score: 2609; 90.4% identity (90.4% similar) in 437 aa overlap (1-437:1-396) 10 20 30 40 50 60 pF1KE4 MQLPRWWELGDPCAWTGQGRGTRRMSPATTGTFLLTVYSIFSKVHSDRSVYPSAGVLFVH :::::::::::::::::::::::::::::::::::: NP_001 MQLPRWWELGDPCAWTGQGRGTRRMSPATTGTFLLT------------------------ 10 20 30 70 80 90 100 110 120 pF1KE4 VLEREYFKGEFPPYPKPGEISNDPITFNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTA ::::::::::::::::::::::::::::::::::::::::::: NP_001 -----------------GEISNDPITFNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTA 40 50 60 70 130 140 150 160 170 180 pF1KE4 ENVGKPTIIEITAYNRRTFETARHNLIINIMSAEDFPLPYQAEFFIKNMNVEEMLASEVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ENVGKPTIIEITAYNRRTFETARHNLIINIMSAEDFPLPYQAEFFIKNMNVEEMLASEVL 80 90 100 110 120 130 190 200 210 220 230 240 pF1KE4 GDFLGAVKNVWQPERLNAINITSALDRGGRVPLPINDLKEGVYVMVGADVPFSSCLREVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GDFLGAVKNVWQPERLNAINITSALDRGGRVPLPINDLKEGVYVMVGADVPFSSCLREVE 140 150 160 170 180 190 250 260 270 280 290 300 pF1KE4 NPQNQLRCSQEMEPVITCDKKFRTQFYIDWCKISLVDKTKQVSTYQEVIRGEGILPDGGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NPQNQLRCSQEMEPVITCDKKFRTQFYIDWCKISLVDKTKQVSTYQEVIRGEGILPDGGE 200 210 220 230 240 250 310 320 330 340 350 360 pF1KE4 YKPPSDSLKSRDYYTDFLITLAVPSAVALVLFLILAYIMCCRREGVEKRNMQTPDIQLVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 YKPPSDSLKSRDYYTDFLITLAVPSAVALVLFLILAYIMCCRREGVEKRNMQTPDIQLVH 260 270 280 290 300 310 370 380 390 400 410 420 pF1KE4 HSAIQKSTKELRDMSKNREIAWPLSTLPVFHPVTGEIIHPLHTDNYDSTNMPLMQTQQNL :::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::: NP_001 HSAIQKSTKELRDMSKNREIAWPLSTLPVFHPVTGEIIPPLHTDNYDSTNMPLMQTQQNL 320 330 340 350 360 370 430 pF1KE4 PHQTQIPQQQTTGKWYP ::::::::::::::::: NP_001 PHQTQIPQQQTTGKWYP 380 390 >>XP_016868253 (OMIM: 159900,604149) PREDICTED: epsilon- (428 aa) initn: 2903 init1: 2360 opt: 2360 Z-score: 2839.4 bits: 534.5 E(85289): 2e-151 Smith-Waterman score: 2889; 97.5% identity (97.7% similar) in 437 aa overlap (1-437:1-428) 10 20 30 40 50 60 pF1KE4 MQLPRWWELGDPCAWTGQGRGTRRMSPATTGTFLLTVYSIFSKVHSDRSVYPSAGVLFVH ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: XP_016 MQLPRWWELGDPCAWTGQGRGTRRMSPATTGTFLLTVYSIFSKVHSDRNVYPSAGVLFVH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 VLEREYFKGEFPPYPKPGEISNDPITFNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VLEREYFKGEFPPYPKPGEISNDPITFNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPTA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 ENVGKPTIIEITAYNRRTFETARHNLIINIMSAEDFPLPYQAEFFIKNMNVEEMLASEVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ENVGKPTIIEITAYNRRTFETARHNLIINIMSAEDFPLPYQAEFFIKNMNVEEMLASEVL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 GDFLGAVKNVWQPERLNAINITSALDRGGRVPLPINDLKEGVYVMVGADVPFSSCLREVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GDFLGAVKNVWQPERLNAINITSALDRGGRVPLPINDLKEGVYVMVGADVPFSSCLREVE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 NPQNQLRCSQEMEPVITCDKKFRTQFYIDWCKISLVDKTKQVSTYQEVIRGEGILPDGGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NPQNQLRCSQEMEPVITCDKKFRTQFYIDWCKISLVDKTKQVSTYQEVIRGEGILPDGGE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 YKPPSDSLKSRDYYTDFLITLAVPSAVALVLFLILAYIMCCRREGVEKRNMQTPDIQLVH :::::::::::::::::::::::::::::::::::::::::::::: ::::: XP_016 YKPPSDSLKSRDYYTDFLITLAVPSAVALVLFLILAYIMCCRREGV---------IQLVH 310 320 330 340 350 370 380 390 400 410 420 pF1KE4 HSAIQKSTKELRDMSKNREIAWPLSTLPVFHPVTGEIIHPLHTDNYDSTNMPLMQTQQNL :::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::: XP_016 HSAIQKSTKELRDMSKNREIAWPLSTLPVFHPVTGEIIPPLHTDNYDSTNMPLMQTQQNL 360 370 380 390 400 410 430 pF1KE4 PHQTQIPQQQTTGKWYP ::::::::::::::::: XP_016 PHQTQIPQQQTTGKWYP 420 437 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 01:13:08 2016 done: Sun Nov 6 01:13:09 2016 Total Scan time: 8.800 Total Display time: 0.090 Function used was FASTA [36.3.4 Apr, 2011]