FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1511, 322 aa 1>>>pF1KE1511 322 - 322 aa - 322 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6016+/-0.000803; mu= 13.9991+/- 0.048 mean_var=60.4435+/-12.172, 0's: 0 Z-trim(106.8): 15 B-trim: 0 in 0/50 Lambda= 0.164968 statistics sampled from 9159 (9167) to 9159 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.668), E-opt: 0.2 (0.282), width: 16 Scan time: 2.640 The best scores are: opt bits E(32554) CCDS5145.1 ARG1 gene_id:383|Hs108|chr6 ( 322) 2133 515.9 1.6e-146 CCDS59038.1 ARG1 gene_id:383|Hs108|chr6 ( 330) 2107 509.8 1.2e-144 CCDS9785.1 ARG2 gene_id:384|Hs108|chr14 ( 354) 1336 326.3 2.3e-89 >>CCDS5145.1 ARG1 gene_id:383|Hs108|chr6 (322 aa) initn: 2133 init1: 2133 opt: 2133 Z-score: 2743.8 bits: 515.9 E(32554): 1.6e-146 Smith-Waterman score: 2133; 100.0% identity (100.0% similar) in 322 aa overlap (1-322:1-322) 10 20 30 40 50 60 pF1KE1 MSAKSRTIGIIGAPFSKGQPRGGVEEGPTVLRKAGLLEKLKEQECDVKDYGDLPFADIPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS51 MSAKSRTIGIIGAPFSKGQPRGGVEEGPTVLRKAGLLEKLKEQECDVKDYGDLPFADIPN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 DSPFQIVKNPRSVGKASEQLAGKVAEVKKNGRISLVLGGDHSLAIGSISGHARVHPDLGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS51 DSPFQIVKNPRSVGKASEQLAGKVAEVKKNGRISLVLGGDHSLAIGSISGHARVHPDLGV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 IWVDAHTDINTPLTTTSGNLHGQPVSFLLKELKGKIPDVPGFSWVTPCISAKDIVYIGLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS51 IWVDAHTDINTPLTTTSGNLHGQPVSFLLKELKGKIPDVPGFSWVTPCISAKDIVYIGLR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 DVDPGEHYILKTLGIKYFSMTEVDRLGIGKVMEETLSYLLGRKKRPIHLSFDVDGLDPSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS51 DVDPGEHYILKTLGIKYFSMTEVDRLGIGKVMEETLSYLLGRKKRPIHLSFDVDGLDPSF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 TPATGTPVVGGLTYREGLYITEEIYKTGLLSGLDIMEVNPSLGKTPEEVTRTVNTAVAIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS51 TPATGTPVVGGLTYREGLYITEEIYKTGLLSGLDIMEVNPSLGKTPEEVTRTVNTAVAIT 250 260 270 280 290 300 310 320 pF1KE1 LACFGLAREGNHKPIDYLNPPK :::::::::::::::::::::: CCDS51 LACFGLAREGNHKPIDYLNPPK 310 320 >>CCDS59038.1 ARG1 gene_id:383|Hs108|chr6 (330 aa) initn: 2119 init1: 1858 opt: 2107 Z-score: 2710.2 bits: 509.8 E(32554): 1.2e-144 Smith-Waterman score: 2107; 97.6% identity (97.6% similar) in 330 aa overlap (1-322:1-330) 10 20 30 40 50 pF1KE1 MSAKSRTIGIIGAPFSKGQPRGGVEEGPTVLRKAGLLEKLKEQ--------ECDVKDYGD ::::::::::::::::::::::::::::::::::::::::::: ::::::::: CCDS59 MSAKSRTIGIIGAPFSKGQPRGGVEEGPTVLRKAGLLEKLKEQVTQNFLILECDVKDYGD 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 LPFADIPNDSPFQIVKNPRSVGKASEQLAGKVAEVKKNGRISLVLGGDHSLAIGSISGHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 LPFADIPNDSPFQIVKNPRSVGKASEQLAGKVAEVKKNGRISLVLGGDHSLAIGSISGHA 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE1 RVHPDLGVIWVDAHTDINTPLTTTSGNLHGQPVSFLLKELKGKIPDVPGFSWVTPCISAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 RVHPDLGVIWVDAHTDINTPLTTTSGNLHGQPVSFLLKELKGKIPDVPGFSWVTPCISAK 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE1 DIVYIGLRDVDPGEHYILKTLGIKYFSMTEVDRLGIGKVMEETLSYLLGRKKRPIHLSFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 DIVYIGLRDVDPGEHYILKTLGIKYFSMTEVDRLGIGKVMEETLSYLLGRKKRPIHLSFD 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE1 VDGLDPSFTPATGTPVVGGLTYREGLYITEEIYKTGLLSGLDIMEVNPSLGKTPEEVTRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 VDGLDPSFTPATGTPVVGGLTYREGLYITEEIYKTGLLSGLDIMEVNPSLGKTPEEVTRT 250 260 270 280 290 300 300 310 320 pF1KE1 VNTAVAITLACFGLAREGNHKPIDYLNPPK :::::::::::::::::::::::::::::: CCDS59 VNTAVAITLACFGLAREGNHKPIDYLNPPK 310 320 330 >>CCDS9785.1 ARG2 gene_id:384|Hs108|chr14 (354 aa) initn: 1353 init1: 1110 opt: 1336 Z-score: 1718.0 bits: 326.3 E(32554): 2.3e-89 Smith-Waterman score: 1336; 60.1% identity (85.4% similar) in 316 aa overlap (7-321:25-340) 10 20 30 40 pF1KE1 MSAKSRTIGIIGAPFSKGQPRGGVEEGPTVLRKAGLLEKLKE ....::::::.:: : :::.::...:.:::...:. CCDS97 MSLRGSLSRLLQTRVHSILKKSVHSVAVIGAPFSQGQKRKGVEHGPAAIREAGLMKRLSS 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE1 QECDVKDYGDLPFADIPNDSPFQ-IVKNPRSVGKASEQLAGKVAEVKKNGRISLVLGGDH : .::.::: :. .:.:. .. .. :::::: :...:: :... ..: ..::::: CCDS97 LGCHLKDFGDLSFTPVPKDDLYNNLIVNPRSVGLANQELAEVVSRAVSDGYSCVTLGGDH 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE1 SLAIGSISGHARVHPDLGVIWVDAHTDINTPLTTTSGNLHGQPVSFLLKELKGKIPDVPG :::::.:::::: ::: :.:::::.::::::::.:::::::::::::.::. :.:..:: CCDS97 SLAIGTISGHARHCPDLCVVWVDAHADINTPLTTSSGNLHGQPVSFLLRELQDKVPQLPG 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE1 FSWVTPCISAKDIVYIGLRDVDPGEHYILKTLGIKYFSMTEVDRLGIGKVMEETLSYLLG :::. ::::. .::::::::::: ::.:::. :.:::: ..::::: ::::.:.. :.: CCDS97 FSWIKPCISSASIVYIGLRDVDPPEHFILKNYDIQYFSMRDIDRLGIQKVMERTFDLLIG 190 200 210 220 230 240 230 240 250 260 270 280 pF1KE1 RKKRPIHLSFDVDGLDPSFTPATGTPVVGGLTYREGLYITEEIYKTGLLSGLDIMEVNPS ...::::::::.:..::...::::::::::::::::.::.:::..:::::.::..::::. CCDS97 KRQRPIHLSFDIDAFDPTLAPATGTPVVGGLTYREGMYIAEEIHNTGLLSALDLVEVNPQ 250 260 270 280 290 300 290 300 310 320 pF1KE1 LGKTPEEVTRTVNTAVAITLACFGLAREGNHKPIDYLNPPK :. . ::. :.: :: . . :: .:::.: : : : CCDS97 LATSEEEAKTTANLAVDVIASSFGQTREGGHIVYDQLPTPSSPDESENQARVRI 310 320 330 340 350 322 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 00:44:30 2016 done: Mon Nov 7 00:44:31 2016 Total Scan time: 2.640 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]