Result of FASTA (ccds) for
pFN21AE2292
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2292, 328 aa
1>>>pF1KE2292 328 - 328 aa - 328 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.9383+/-0.000962; mu= 12.5583+/- 0.058
mean_var=79.1832+/-15.944, 0's: 0 Z-trim(104.8): 69 B-trim: 0 in 0/52
Lambda= 0.144131
statistics sampled from 8001 (8068) to 8001 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.624), E-opt: 0.2 (0.248), width: 16
Scan time: 2.540
The best scores are: opt bits E(32554)
CCDS1206.1 CD84 gene_id:8832|Hs108|chr1 ( 328) 2133 453.3 1.2e-127
CCDS53397.1 CD84 gene_id:8832|Hs108|chr1 ( 272) 1669 356.8 1.1e-98
CCDS81388.1 CD84 gene_id:8832|Hs108|chr1 ( 339) 1670 357.1 1.2e-98
CCDS53396.1 CD84 gene_id:8832|Hs108|chr1 ( 345) 1669 356.9 1.4e-98
CCDS53395.1 CD84 gene_id:8832|Hs108|chr1 ( 214) 1267 273.2 1.3e-73
CCDS1205.1 SLAMF6 gene_id:114836|Hs108|chr1 ( 331) 454 104.2 1.5e-22
CCDS53394.1 SLAMF6 gene_id:114836|Hs108|chr1 ( 332) 454 104.2 1.5e-22
CCDS1191.1 SLAMF9 gene_id:89886|Hs108|chr1 ( 289) 429 99.0 5e-21
CCDS65695.1 LY9 gene_id:4063|Hs108|chr1 ( 641) 423 97.9 2.3e-20
CCDS30916.1 LY9 gene_id:4063|Hs108|chr1 ( 655) 410 95.2 1.5e-19
CCDS60321.1 SLAMF7 gene_id:57823|Hs108|chr1 ( 296) 399 92.7 3.8e-19
CCDS1209.1 SLAMF7 gene_id:57823|Hs108|chr1 ( 335) 395 91.9 7.6e-19
>>CCDS1206.1 CD84 gene_id:8832|Hs108|chr1 (328 aa)
initn: 2133 init1: 2133 opt: 2133 Z-score: 2405.1 bits: 453.3 E(32554): 1.2e-127
Smith-Waterman score: 2133; 100.0% identity (100.0% similar) in 328 aa overlap (1-328:1-328)
10 20 30 40 50 60
pF1KE2 MAQHHLWILLLCLQTWPEAAGKDSEIFTVNGILGESVTFPVNIQEPRQVKIIAWTSKTSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MAQHHLWILLLCLQTWPEAAGKDSEIFTVNGILGESVTFPVNIQEPRQVKIIAWTSKTSV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 AYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINTQADPYTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 AYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINTQADPYTT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 TKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNWSPLGEEGNVLQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 TKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNWSPLGEEGNVLQI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 FQTPEDQELTYTCTAQNPVSNNSDSISARQLCADIAMGFRTHHTGLLSVLAMFFLLVLIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 FQTPEDQELTYTCTAQNPVSNNSDSISARQLCADIAMGFRTHHTGLLSVLAMFFLLVLIL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 SSVFLFRLFKRRQDAASKKTIYTYIMASRNTQPAESRIYDEILQSKVLPSKEEPVNTVYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 SSVFLFRLFKRRQDAASKKTIYTYIMASRNTQPAESRIYDEILQSKVLPSKEEPVNTVYS
250 260 270 280 290 300
310 320
pF1KE2 EVQFADKMGKASTQDSKPPGTSSYEIVI
::::::::::::::::::::::::::::
CCDS12 EVQFADKMGKASTQDSKPPGTSSYEIVI
310 320
>>CCDS53397.1 CD84 gene_id:8832|Hs108|chr1 (272 aa)
initn: 1669 init1: 1669 opt: 1669 Z-score: 1885.0 bits: 356.8 E(32554): 1.1e-98
Smith-Waterman score: 1669; 99.2% identity (99.6% similar) in 256 aa overlap (1-256:1-256)
10 20 30 40 50 60
pF1KE2 MAQHHLWILLLCLQTWPEAAGKDSEIFTVNGILGESVTFPVNIQEPRQVKIIAWTSKTSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MAQHHLWILLLCLQTWPEAAGKDSEIFTVNGILGESVTFPVNIQEPRQVKIIAWTSKTSV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 AYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINTQADPYTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 AYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINTQADPYTT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 TKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNWSPLGEEGNVLQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 TKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNWSPLGEEGNVLQI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 FQTPEDQELTYTCTAQNPVSNNSDSISARQLCADIAMGFRTHHTGLLSVLAMFFLLVLIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 FQTPEDQELTYTCTAQNPVSNNSDSISARQLCADIAMGFRTHHTGLLSVLAMFFLLVLIL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 SSVFLFRLFKRRQDAASKKTIYTYIMASRNTQPAESRIYDEILQSKVLPSKEEPVNTVYS
::::::::::::: :.
CCDS53 SSVFLFRLFKRRQGASLQGRASEHSLFRSAVC
250 260 270
>>CCDS81388.1 CD84 gene_id:8832|Hs108|chr1 (339 aa)
initn: 2111 init1: 1664 opt: 1670 Z-score: 1884.6 bits: 357.1 E(32554): 1.2e-98
Smith-Waterman score: 2092; 96.5% identity (96.5% similar) in 339 aa overlap (1-328:1-339)
10 20 30 40 50 60
pF1KE2 MAQHHLWILLLCLQTWPEAAGKDSEIFTVNGILGESVTFPVNIQEPRQVKIIAWTSKTSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 MAQHHLWILLLCLQTWPEAAGKDSEIFTVNGILGESVTFPVNIQEPRQVKIIAWTSKTSV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 AYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINTQADPYTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 AYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINTQADPYTT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 TKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNWSPLGEEGNVLQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 TKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNWSPLGEEGNVLQI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 FQTPEDQELTYTCTAQNPVSNNSDSISARQLCADIAMGFRTHHTGLLSVLAMFFLLVLIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 FQTPEDQELTYTCTAQNPVSNNSDSISARQLCADIAMGFRTHHTGLLSVLAMFFLLVLIL
190 200 210 220 230 240
250 260 270 280
pF1KE2 SSVFLFRLFKRRQD-----------AASKKTIYTYIMASRNTQPAESRIYDEILQSKVLP
::::::::::::: :::::::::::::::::::::::::::::::::::
CCDS81 SSVFLFRLFKRRQGSCLNTFTKNPYAASKKTIYTYIMASRNTQPAESRIYDEILQSKVLP
250 260 270 280 290 300
290 300 310 320
pF1KE2 SKEEPVNTVYSEVQFADKMGKASTQDSKPPGTSSYEIVI
:::::::::::::::::::::::::::::::::::::::
CCDS81 SKEEPVNTVYSEVQFADKMGKASTQDSKPPGTSSYEIVI
310 320 330
>>CCDS53396.1 CD84 gene_id:8832|Hs108|chr1 (345 aa)
initn: 2111 init1: 1664 opt: 1669 Z-score: 1883.4 bits: 356.9 E(32554): 1.4e-98
Smith-Waterman score: 2080; 94.8% identity (94.8% similar) in 345 aa overlap (1-328:1-345)
10 20 30 40 50 60
pF1KE2 MAQHHLWILLLCLQTWPEAAGKDSEIFTVNGILGESVTFPVNIQEPRQVKIIAWTSKTSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MAQHHLWILLLCLQTWPEAAGKDSEIFTVNGILGESVTFPVNIQEPRQVKIIAWTSKTSV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 AYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINTQADPYTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 AYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINTQADPYTT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 TKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNWSPLGEEGNVLQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 TKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNWSPLGEEGNVLQI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 FQTPEDQELTYTCTAQNPVSNNSDSISARQLCADIAMGFRTHHTGLLSVLAMFFLLVLIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 FQTPEDQELTYTCTAQNPVSNNSDSISARQLCADIAMGFRTHHTGLLSVLAMFFLLVLIL
190 200 210 220 230 240
250 260 270 280
pF1KE2 SSVFLFRLFKRRQD-----------------AASKKTIYTYIMASRNTQPAESRIYDEIL
::::::::::::: :::::::::::::::::::::::::::::
CCDS53 SSVFLFRLFKRRQGRIFPEGSCLNTFTKNPYAASKKTIYTYIMASRNTQPAESRIYDEIL
250 260 270 280 290 300
290 300 310 320
pF1KE2 QSKVLPSKEEPVNTVYSEVQFADKMGKASTQDSKPPGTSSYEIVI
:::::::::::::::::::::::::::::::::::::::::::::
CCDS53 QSKVLPSKEEPVNTVYSEVQFADKMGKASTQDSKPPGTSSYEIVI
310 320 330 340
>>CCDS53395.1 CD84 gene_id:8832|Hs108|chr1 (214 aa)
initn: 1362 init1: 1267 opt: 1267 Z-score: 1434.8 bits: 273.2 E(32554): 1.3e-73
Smith-Waterman score: 1267; 100.0% identity (100.0% similar) in 198 aa overlap (131-328:17-214)
110 120 130 140 150 160
pF1KE2 MEDAGDYKADINTQADPYTTTKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKE
::::::::::::::::::::::::::::::
CCDS53 MAQHHLWILLLCLQTCRLGKPKITQSLMASVNSTCNVTLTCSVEKE
10 20 30 40
170 180 190 200 210 220
pF1KE2 EKNVTYNWSPLGEEGNVLQIFQTPEDQELTYTCTAQNPVSNNSDSISARQLCADIAMGFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 EKNVTYNWSPLGEEGNVLQIFQTPEDQELTYTCTAQNPVSNNSDSISARQLCADIAMGFR
50 60 70 80 90 100
230 240 250 260 270 280
pF1KE2 THHTGLLSVLAMFFLLVLILSSVFLFRLFKRRQDAASKKTIYTYIMASRNTQPAESRIYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 THHTGLLSVLAMFFLLVLILSSVFLFRLFKRRQDAASKKTIYTYIMASRNTQPAESRIYD
110 120 130 140 150 160
290 300 310 320
pF1KE2 EILQSKVLPSKEEPVNTVYSEVQFADKMGKASTQDSKPPGTSSYEIVI
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 EILQSKVLPSKEEPVNTVYSEVQFADKMGKASTQDSKPPGTSSYEIVI
170 180 190 200 210
>>CCDS1205.1 SLAMF6 gene_id:114836|Hs108|chr1 (331 aa)
initn: 294 init1: 105 opt: 454 Z-score: 518.2 bits: 104.2 E(32554): 1.5e-22
Smith-Waterman score: 454; 30.6% identity (64.4% similar) in 317 aa overlap (6-302:2-311)
10 20 30 40 50
pF1KE2 MAQHHLWI---LLLCLQTWPEAAGKDSEI--FTVNGILGESVTFPVNIQEPRQVKIIAWT
::. ::. . : . ..: . . ::::::::::.:... ..:..:.:
CCDS12 MLWLFQSLLFVFCFGPGNVVSQSSLTPLMVNGILGESVTLPLEFPAGEKVNFITWL
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 -SKTSVAYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINTQ
..::.:...: .... : . ::. . .:.. . .:.: .:.:.:::.:.:.:.:.:.
CCDS12 FNETSLAFIVPHETKS-PEIHVTNPKQGKRLN-FTQSYSLQLSNLKMEDTGSYRAQISTK
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 ADPYTTTKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNWSPLGEE
.. .. :.:.: :.: . ..:. . : ::.. :::::: . ::.. : ::.
CCDS12 TSAKLSS--YTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNT
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE2 GNV---LQIFQTPE-DQELTYTCTAQNPVSNNSDSISARQLCADIAMGFRTHHTGLLSVL
. : . :. ..: ::: :.: ::: : :.::..:: :. . . . :. :
CCDS12 LSSQPNLTVSWDPRISSEQDYTCIAENAVSNLSFSVSAQKLCEDVKIQYTDTKMILFMVS
180 190 200 210 220 230
240 250 260 270 280
pF1KE2 AMFFLLVLILSSVFLFRLFKRRQDAASKKTIYTYIMAS-RNTQ-----PAESRIYDEILQ
.. ... .: ..:. ....:.:. : .: : : :: . :... .: . .
CCDS12 GICIVFGFI---ILLLLVLRKRRDSLSLSTQRTQGPESARNLEYVSVSPTNNTVYASVTH
240 250 260 270 280
290 300 310 320
pF1KE2 S----KVLPSKEEPVNTVYSEVQFADKMGKASTQDSKPPGTSSYEIVI
: .. .:. . :.:: .
CCDS12 SNRETEIWTPRENDTITIYSTINHSKESKPTFSRATALDNVV
290 300 310 320 330
>>CCDS53394.1 SLAMF6 gene_id:114836|Hs108|chr1 (332 aa)
initn: 288 init1: 119 opt: 454 Z-score: 518.2 bits: 104.2 E(32554): 1.5e-22
Smith-Waterman score: 454; 30.5% identity (64.5% similar) in 318 aa overlap (6-302:2-312)
10 20 30 40 50
pF1KE2 MAQHHLWI---LLLCLQTWPEAAGKDSEI--FTVNGILGESVTFPVNIQEPRQVKIIAWT
::. ::. . : . ..: . . ::::::::::.:... ..:..:.:
CCDS53 MLWLFQSLLFVFCFGPGNVVSQSSLTPLMVNGILGESVTLPLEFPAGEKVNFITWL
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 -SKTSVAYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINTQ
..::.:...: .... : . ::. . .:.. . .:.: .:.:.:::.:.:.:.:.:.
CCDS53 FNETSLAFIVPHETKS-PEIHVTNPKQGKRLN-FTQSYSLQLSNLKMEDTGSYRAQISTK
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 ADPYTTTKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNWSPLGEE
.. .. :.:.: :.: . ..:. . : ::.. :::::: . ::.. : ::.
CCDS53 TSAKLSS--YTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNT
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE2 GNV---LQIFQTPE-DQELTYTCTAQNPVSNNSDSISARQLCADIAMGFRTHHTGLLSVL
. : . :. ..: ::: :.: ::: : :.::..:: :. . . . :. :
CCDS53 LSSQPNLTVSWDPRISSEQDYTCIAENAVSNLSFSVSAQKLCEDVKIQYTDTKMILFMVS
180 190 200 210 220 230
240 250 260 270 280
pF1KE2 AMFFLLVLILSSVFLFRLFKRRQDAASKKTIYTYIMA--SRNTQ-----PAESRIYDEIL
.. ... .: ..:. ....:.:. : .: : : .:: . :... .: .
CCDS53 GICIVFGFI---ILLLLVLRKRRDSLSLSTQRTQGPAESARNLEYVSVSPTNNTVYASVT
240 250 260 270 280
290 300 310 320
pF1KE2 QS----KVLPSKEEPVNTVYSEVQFADKMGKASTQDSKPPGTSSYEIVI
.: .. .:. . :.:: .
CCDS53 HSNRETEIWTPRENDTITIYSTINHSKESKPTFSRATALDNVV
290 300 310 320 330
>>CCDS1191.1 SLAMF9 gene_id:89886|Hs108|chr1 (289 aa)
initn: 482 init1: 345 opt: 429 Z-score: 491.1 bits: 99.0 E(32554): 5e-21
Smith-Waterman score: 469; 31.7% identity (63.1% similar) in 287 aa overlap (7-276:6-287)
10 20 30 40 50
pF1KE2 MAQHHLWILLLCL-------QTWPEAAGKDSEIFTVNGILGESVTFPVNIQEPRQVKIIA
:.::: : . : .... : ..: ::...:..: ..:. :
CCDS11 MCAFPWLLLLLLLQEGSQRRLWRWCGSEE-----VVAVLQESISLPLEIPPDEEVENII
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 WTSKTSVAYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINT
:.:. :.: :.:: .. ::. .: .. : :.:.: ::.: ::.: :.:..:
CCDS11 WSSHKSLATVVPGKEGHPATIMVTNPHYQGQVSFLDPSYSLHISNLSWEDSGLYQAQVNL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 QADPYTTTKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKEEKNVTYNWSPLGE
... .: ..::. .:: :..:.:: .. .: ...:...:.::::: ..::.: :.
CCDS11 RTSQISTMQQYNICVYRWLSEPQITVNFESSGEGACSMSLVCSVEKAGMDMTYSWLSRGD
120 130 140 150 160 170
180 190 200 210 220
pF1KE2 ------EGNVLQIFQTPEDQELTYTCTAQNPVSNNSDS-ISARQLCADIAMGFRTHHTG-
:: ::. : :. :.::: :.::.:: :. : . :: .. . :.
CCDS11 STYTFHEGPVLSTSWRPGDSALSYTCRANNPISNVSSCPIPDGPFYADPNYASEKPSTAF
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE2 --LLSVLAMFFLLVLILSSVFLFRLFKRRQDAASKKTIYTYIMASRNTQPAESRIYDEIL
: . : .:.:::.. .....:. ::.. :: . . . ....:. :
CCDS11 CLLAKGLLIFLLLVILAMGLWVIRVQKRHKMPRMKKLMRNRMKLRKEAKPGSSPA
240 250 260 270 280
290 300 310 320
pF1KE2 QSKVLPSKEEPVNTVYSEVQFADKMGKASTQDSKPPGTSSYEIVI
>>CCDS65695.1 LY9 gene_id:4063|Hs108|chr1 (641 aa)
initn: 736 init1: 336 opt: 423 Z-score: 479.0 bits: 97.9 E(32554): 2.3e-20
Smith-Waterman score: 451; 38.8% identity (67.5% similar) in 209 aa overlap (3-203:33-232)
10 20 30
pF1KE2 MAQHHLWILLLCLQTWPEAAGKDSEIFTVNGI
: : .::. :. :.:::: .:.::
CCDS65 APKSHTDDWAPGPFSSKPQRSQLQIFSSVLQTSLLFLLMGLR----ASGKDSAPTVVSGI
10 20 30 40 50
40 50 60 70 80 90
pF1KE2 LGESVTFPVNIQEPRQVKIIAWTS-KTSVAYVTPGDSETAPVVTVTHRNYYERIHALGPN
:: :::.:.::. ... . : . :...:.. : .. ::. ..: :. .
CCDS65 LGGSVTLPLNISVDTEIENVIWIGPKNALAFARPKEN-----VTIMVKSYLGRLDITKWS
60 70 80 90 100 110
100 110 120 130 140 150
pF1KE2 YNLVISDLRMEDAGDYKADINTQADPYTTTKRYNLQIYRRLGKPKIT-QSLMASVNSTCN
:.: ::.: ..:::.:::.:: . :: ....: .:..: .:..: .:. .: : .::
CCDS65 YSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQLQEPQVTMKSVKVSENFSCN
120 130 140 150 160 170
160 170 180 190 200
pF1KE2 VTLTCSVEKEEKNVTYNWSPL------GEEGNVLQIFQTPEDQELTYTCTAQNPVSNNSD
.:: :::. ::.: :.:.: .. :..: . .:: : .: : ::::::::. :
CCDS65 ITLMCSVKGAEKSVLYSWTPREPHASESNGGSILTVSRTPCDPDLPYICTAQNPVSQRSS
180 190 200 210 220 230
210 220 230 240 250 260
pF1KE2 SISARQLCADIAMGFRTHHTGLLSVLAMFFLLVLILSSVFLFRLFKRRQDAASKKTIYTY
CCDS65 LPVHVGQFCTDPGASRGGTTGETVVGVLGEPVTLPLALPACRDTEKVVWLFNTSIISKER
240 250 260 270 280 290
>--
initn: 750 init1: 336 opt: 428 Z-score: 484.6 bits: 98.9 E(32554): 1.1e-20
Smith-Waterman score: 428; 28.2% identity (61.0% similar) in 326 aa overlap (11-326:241-548)
10 20 30 40
pF1KE2 MAQHHLWILLLCLQTWPEAAGKDSEIFTVNGILGESVTFP
.: . .: .: :: :.::: ::.:
CCDS65 RTPCDPDLPYICTAQNPVSQRSSLPVHVGQFCTDPGASRGGTTGE--TVVGVLGEPVTLP
220 230 240 250 260
50 60 70 80 90 100
pF1KE2 VNIQEPRQVKIIAWTSKTSVAYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLR
. . :... ..: .::. .. :: . .. : .:. . . . .: ::.:.
CCDS65 LALPACRDTEKVVWLFNTSIISKEREEAATADPLIKSRDPYKNRVWVSSQDCSLKISQLK
270 280 290 300 310 320
110 120 130 140 150 160
pF1KE2 MEDAGDYKADINTQADPYTTTKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKE
.:::: :.: . ..:. :. . .: ::::: ::::: :: : .. : ..::::::
CCDS65 IEDAGPYHAYVCSEASSVTSMTHVTLLIYRRLRKPKITWSLRHSEDGICRISLTCSVEDG
330 340 350 360 370 380
170 180 190 200 210
pF1KE2 EKNVTYNWSPLGEEGNV------LQIFQTPEDQELTYTCTAQNPVSNNSDSISARQLCAD
..: :.:.:: .:. : :.. ... . ::::.:::: .: .. ....:.
CCDS65 GNTVMYTWTPLQKEAVVSQGESHLNVSWRSSENHPNLTCTASNPVSRSSHQFLSENICSG
390 400 410 420 430 440
220 230 240 250 260 270
pF1KE2 IAMGFRTHHTGLLSVLAMFFLLVLILSSVFLFRLFKRRQDAASKKTIYTYIMASRNTQPA
..: : ...:... :. ..: . ..::. .. .. .. .:. ::
CCDS65 PE-----RNTKLW--IGLFLMVCLLCVGIFSWCIWKRK----GRCSVPAFC-SSQAEAPA
450 460 470 480 490
280 290 300 310 320
pF1KE2 ESRIYDEILQSKVLPSKEEPVNTVYSEVQFADKMGKASTQDSKP----PGTSSYEIVI
.. :.. :.. . :....:. : : .:. . ....: : .. ::.
CCDS65 DTPGYEK-LDTPLRPARQQPTPTSDSS---SDSNLTTEEDEDRPEVHKPISGRYEVFDQV
500 510 520 530 540 550
CCDS65 TQEGAGHDPAPEGQADYDPVTPYVTEVESVVGENTMYAQVFNLQGKTPVSQKEESSATIY
560 570 580 590 600 610
>>CCDS30916.1 LY9 gene_id:4063|Hs108|chr1 (655 aa)
initn: 736 init1: 336 opt: 410 Z-score: 464.2 bits: 95.2 E(32554): 1.5e-19
Smith-Waterman score: 451; 38.8% identity (67.5% similar) in 209 aa overlap (3-203:33-232)
10 20 30
pF1KE2 MAQHHLWILLLCLQTWPEAAGKDSEIFTVNGI
: : .::. :. :.:::: .:.::
CCDS30 APKSHTDDWAPGPFSSKPQRSQLQIFSSVLQTSLLFLLMGLR----ASGKDSAPTVVSGI
10 20 30 40 50
40 50 60 70 80 90
pF1KE2 LGESVTFPVNIQEPRQVKIIAWTS-KTSVAYVTPGDSETAPVVTVTHRNYYERIHALGPN
:: :::.:.::. ... . : . :...:.. : .. ::. ..: :. .
CCDS30 LGGSVTLPLNISVDTEIENVIWIGPKNALAFARPKEN-----VTIMVKSYLGRLDITKWS
60 70 80 90 100 110
100 110 120 130 140 150
pF1KE2 YNLVISDLRMEDAGDYKADINTQADPYTTTKRYNLQIYRRLGKPKIT-QSLMASVNSTCN
:.: ::.: ..:::.:::.:: . :: ....: .:..: .:..: .:. .: : .::
CCDS30 YSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQLQEPQVTMKSVKVSENFSCN
120 130 140 150 160 170
160 170 180 190 200
pF1KE2 VTLTCSVEKEEKNVTYNWSPL------GEEGNVLQIFQTPEDQELTYTCTAQNPVSNNSD
.:: :::. ::.: :.:.: .. :..: . .:: : .: : ::::::::. :
CCDS30 ITLMCSVKGAEKSVLYSWTPREPHASESNGGSILTVSRTPCDPDLPYICTAQNPVSQRSS
180 190 200 210 220 230
210 220 230 240 250 260
pF1KE2 SISARQLCADIAMGFRTHHTGLLSVLAMFFLLVLILSSVFLFRLFKRRQDAASKKTIYTY
CCDS30 LPVHVGQFCTDPGASRGGTTGETVVGVLGEPVTLPLALPACRDTEKVVWLFNTSIISKER
240 250 260 270 280 290
>--
initn: 750 init1: 336 opt: 410 Z-score: 464.2 bits: 95.2 E(32554): 1.5e-19
Smith-Waterman score: 410; 28.1% identity (58.4% similar) in 334 aa overlap (11-326:241-562)
10 20 30 40
pF1KE2 MAQHHLWILLLCLQTWPEAAGKDSEIFTVNGILGESVTFP
.: . .: .: :: :.::: ::.:
CCDS30 RTPCDPDLPYICTAQNPVSQRSSLPVHVGQFCTDPGASRGGTTGE--TVVGVLGEPVTLP
220 230 240 250 260
50 60 70 80 90 100
pF1KE2 VNIQEPRQVKIIAWTSKTSVAYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLR
. . :... ..: .::. .. :: . .. : .:. . . . .: ::.:.
CCDS30 LALPACRDTEKVVWLFNTSIISKEREEAATADPLIKSRDPYKNRVWVSSQDCSLKISQLK
270 280 290 300 310 320
110 120 130 140 150 160
pF1KE2 MEDAGDYKADINTQADPYTTTKRYNLQIYRRLGKPKITQSLMASVNSTCNVTLTCSVEKE
.:::: :.: . ..:. :. . .: ::::: ::::: :: : .. : ..::::::
CCDS30 IEDAGPYHAYVCSEASSVTSMTHVTLLIYRRLRKPKITWSLRHSEDGICRISLTCSVEDG
330 340 350 360 370 380
170 180 190 200 210
pF1KE2 EKNVTYNWSPLGEEGNV------LQIFQTPEDQELTYTCTAQNPVSNNSDSISARQLCAD
..: :.:.:: .:. : :.. ... . ::::.:::: .: .. ....:.
CCDS30 GNTVMYTWTPLQKEAVVSQGESHLNVSWRSSENHPNLTCTASNPVSRSSHQFLSENICSG
390 400 410 420 430 440
220 230 240 250 260 270
pF1KE2 IAMGFRTHHTGLLSVLAMFFLLVLILSSVFLFRLFKRRQDAASKKTIYTYIMASRNT-QP
..: : ...:... :. ..: . ..::. . . : .: .:
CCDS30 PE-----RNTKLW--IGLFLMVCLLCVGIFSWCIWKRKGRCSVPAFCSSQAEAPADTPEP
450 460 470 480 490 500
280 290 300 310 320
pF1KE2 -AESRIYD------EILQSKVLPSKEEPVNTVYSEVQFADKMGKASTQDSKP----PGTS
: .:. : :.. . :....:. : : .:. . ....: : ..
CCDS30 TAGHTLYSVLSQGYEKLDTPLRPARQQPTPTSDSS---SDSNLTTEEDEDRPEVHKPISG
510 520 530 540 550
pF1KE2 SYEIVI
::.
CCDS30 RYEVFDQVTQEGAGHDPAPEGQADYDPVTPYVTEVESVVGENTMYAQVFNLQGKTPVSQK
560 570 580 590 600 610
328 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 00:46:48 2016 done: Mon Nov 7 00:46:49 2016
Total Scan time: 2.540 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]