FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6112, 135 aa 1>>>pF1KE6112 135 - 135 aa - 135 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0956+/-0.000828; mu= 11.5752+/- 0.050 mean_var=53.8592+/-10.631, 0's: 0 Z-trim(105.6): 19 B-trim: 6 in 1/50 Lambda= 0.174761 statistics sampled from 8502 (8521) to 8502 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.655), E-opt: 0.2 (0.262), width: 16 Scan time: 1.090 The best scores are: opt bits E(32554) CCDS6228.1 FABP5 gene_id:2171|Hs108|chr8 ( 135) 896 233.6 2.8e-62 CCDS6229.1 PMP2 gene_id:5375|Hs108|chr8 ( 132) 499 133.5 3.7e-32 CCDS6230.1 FABP4 gene_id:2167|Hs108|chr8 ( 132) 468 125.7 8.4e-30 CCDS47882.1 FABP12 gene_id:646486|Hs108|chr8 ( 140) 451 121.4 1.7e-28 CCDS342.1 FABP3 gene_id:2170|Hs108|chr1 ( 133) 438 118.1 1.6e-27 CCDS5127.1 FABP7 gene_id:2173|Hs108|chr6 ( 132) 397 107.8 2.1e-24 CCDS83121.1 FABP7 gene_id:2173|Hs108|chr6 ( 166) 371 101.3 2.4e-22 CCDS1152.1 CRABP2 gene_id:1382|Hs108|chr1 ( 138) 280 78.3 1.6e-15 CCDS10301.1 CRABP1 gene_id:1381|Hs108|chr15 ( 137) 277 77.5 2.7e-15 CCDS3110.2 RBP1 gene_id:5947|Hs108|chr3 ( 197) 234 66.8 6.9e-12 CCDS8574.1 RBP5 gene_id:83758|Hs108|chr12 ( 135) 220 63.2 5.7e-11 >>CCDS6228.1 FABP5 gene_id:2171|Hs108|chr8 (135 aa) initn: 896 init1: 896 opt: 896 Z-score: 1231.5 bits: 233.6 E(32554): 2.8e-62 Smith-Waterman score: 896; 100.0% identity (100.0% similar) in 135 aa overlap (1-135:1-135) 10 20 30 40 50 60 pF1KE6 MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS62 MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 KTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVEC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS62 KTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVEC 70 80 90 100 110 120 130 pF1KE6 VMNNVTCTRIYEKVE ::::::::::::::: CCDS62 VMNNVTCTRIYEKVE 130 >>CCDS6229.1 PMP2 gene_id:5375|Hs108|chr8 (132 aa) initn: 499 init1: 499 opt: 499 Z-score: 690.7 bits: 133.5 E(32554): 3.7e-32 Smith-Waterman score: 499; 58.7% identity (84.1% similar) in 126 aa overlap (9-134:7-132) 10 20 30 40 50 60 pF1KE6 MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTL : :.::.:..::.::: ::::.: ::.: .::: ::. : .::.::::. CCDS62 MSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLAKPTVIISKKGDIITIRTESTF 10 20 30 40 50 70 80 90 100 110 120 pF1KE6 KTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVEC :.:..: ::..:::::::.:::... .. :.: : :.:::::.:: ::: .::.:.:: CCDS62 KNTEISFKLGQEFEETTADNRKTKSIVTLQRGSLNQVQRWDGKETTIKRKLVNGKMVAEC 60 70 80 90 100 110 130 pF1KE6 VMNNVTCTRIYEKVE :..:.:::::::: CCDS62 KMKGVVCTRIYEKV 120 130 >>CCDS6230.1 FABP4 gene_id:2167|Hs108|chr8 (132 aa) initn: 467 init1: 443 opt: 468 Z-score: 648.5 bits: 125.7 E(32554): 8.4e-30 Smith-Waterman score: 468; 55.2% identity (85.6% similar) in 125 aa overlap (9-133:7-131) 10 20 30 40 50 60 pF1KE6 MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTL : :.::.:..::.::::.:::.: ::...::::. ::. .: .:::.:::. CCDS62 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTF 10 20 30 40 50 70 80 90 100 110 120 pF1KE6 KTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVEC :.:..: ::..:.:.::: ::.... .. :.::. :.:::: .:: :: .: :::::: CCDS62 KNTEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVEC 60 70 80 90 100 110 130 pF1KE6 VMNNVTCTRIYEKVE ::..:: ::.::. CCDS62 VMKGVTSTRVYERA 120 130 >>CCDS47882.1 FABP12 gene_id:646486|Hs108|chr8 (140 aa) initn: 451 init1: 451 opt: 451 Z-score: 624.9 bits: 121.4 E(32554): 1.7e-28 Smith-Waterman score: 451; 51.1% identity (77.9% similar) in 131 aa overlap (4-134:2-132) 10 20 30 40 50 60 pF1KE6 MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTL ..::.: :. .. .. ..::::::.: : ::.: .::: :. :: .::::.: . CCDS47 MIDQLQGTWKSISCENSEDYMKELGIGRASRKLGRLAKPTVTISTDGDVITIKTKSIF 10 20 30 40 50 70 80 90 100 110 120 pF1KE6 KTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVEC :....: :::.::: : :.::.. .. .:.: :.:::::.:::::: :::.::: CCDS47 KNNEISFKLGEEFEEITPGGHKTKSKVTLDKESLIQVQDWDGKETTITRKLVDGKMVVES 60 70 80 90 100 110 130 pF1KE6 VMNNVTCTRIYEKVE ..:.: ::: :::: CCDS47 TVNSVICTRTYEKVSSNSVSNS 120 130 140 >>CCDS342.1 FABP3 gene_id:2170|Hs108|chr1 (133 aa) initn: 438 init1: 438 opt: 438 Z-score: 607.5 bits: 118.1 E(32554): 1.6e-27 Smith-Waterman score: 438; 50.0% identity (80.8% similar) in 130 aa overlap (4-133:2-131) 10 20 30 40 50 60 pF1KE6 MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTL :. . : :.:::::.::.::: ::::.: :....:.:: :: .: ::.::.::. CCDS34 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTF 10 20 30 40 50 70 80 90 100 110 120 pF1KE6 KTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVEC :.:..: :: .:.::::: ::.... .. : ::. :.:::.:.:..:.: ::::.. CCDS34 KNTEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTL 60 70 80 90 100 110 130 pF1KE6 VMNNVTCTRIYEKVE . ....::: ::: CCDS34 THGTAVCTRTYEKEA 120 130 >>CCDS5127.1 FABP7 gene_id:2173|Hs108|chr6 (132 aa) initn: 397 init1: 397 opt: 397 Z-score: 551.7 bits: 107.8 E(32554): 2.1e-24 Smith-Waterman score: 397; 45.4% identity (80.8% similar) in 130 aa overlap (4-133:2-131) 10 20 30 40 50 60 pF1KE6 MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTL :. . . :.:..:..:::::: ::::.: :..: ..:: ::. .: ...:.: ::. CCDS51 MVEAFCATWKLTNSQNFDEYMKALGVGFATRQVGNVTKPTVIISQEGDKVVIRTLSTF 10 20 30 40 50 70 80 90 100 110 120 pF1KE6 KTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVEC :.:..: :::.:.::::: :. ..: .. ::. :.:::::....:..::::.:. CCDS51 KNTEISFQLGEEFDETTADDRNCKSVVSLDGDKLVHIQKWDGKETNFVREIKDGKMVMTL 60 70 80 90 100 110 130 pF1KE6 VMNNVTCTRIYEKVE ....:. .: ::: CCDS51 TFGDVVAVRHYEKA 120 130 >>CCDS83121.1 FABP7 gene_id:2173|Hs108|chr6 (166 aa) initn: 368 init1: 336 opt: 371 Z-score: 514.7 bits: 101.3 E(32554): 2.4e-22 Smith-Waterman score: 371; 47.0% identity (81.7% similar) in 115 aa overlap (4-118:2-116) 10 20 30 40 50 60 pF1KE6 MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTL :. . . :.:..:..:::::: ::::.: :..: ..:: ::. .: ...:.: ::. CCDS83 MVEAFCATWKLTNSQNFDEYMKALGVGFATRQVGNVTKPTVIISQEGDKVVIRTLSTF 10 20 30 40 50 70 80 90 100 110 120 pF1KE6 KTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVEC :.:..: :::.:.::::: :. ..: .. ::. :.:::::....:..::::.:. CCDS83 KNTEISFQLGEEFDETTADDRNCKSVVSLDGDKLVHIQKWDGKETNFVREIKDGKMVMVS 60 70 80 90 100 110 130 pF1KE6 VMNNVTCTRIYEKVE CCDS83 NDNSPFFLVFFSSPHTSHLLPSSSLLLPFFLLPSFFNNTSLARFFNYM 120 130 140 150 160 >>CCDS1152.1 CRABP2 gene_id:1382|Hs108|chr1 (138 aa) initn: 206 init1: 120 opt: 280 Z-score: 392.0 bits: 78.3 E(32554): 1.6e-15 Smith-Waterman score: 280; 35.4% identity (73.1% similar) in 130 aa overlap (9-131:6-135) 10 20 30 40 50 pF1KE6 MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMG--AMAKPDCIITCDGKNLTIKTES : :... :..:.: .: :::.. :::.. : .:: : .: .. ::: . CCDS11 MPNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTST 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 TLKTTQFSCTLGEKFEETTADGRKTQTVCNF-TDGALVQHQEW---DGKESTITRKL-KD :..::... .::.::: :.::: ... .. ... .: .:. .: ... ::.: .: CCDS11 TVRTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTRELTND 60 70 80 90 100 110 120 130 pF1KE6 GKLVVECVMNNVTCTRIYEKVE :.:.. . ..:.:::.: CCDS11 GELILTMTADDVVCTRVYVRE 120 130 >>CCDS10301.1 CRABP1 gene_id:1381|Hs108|chr15 (137 aa) initn: 255 init1: 131 opt: 277 Z-score: 388.0 bits: 77.5 E(32554): 2.7e-15 Smith-Waterman score: 277; 37.2% identity (66.7% similar) in 129 aa overlap (9-131:6-134) 10 20 30 40 50 pF1KE6 MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMG--AMAKPDCIITCDGKNLTIKTES : :.. .:..::: .: :::. :::.. : .:: : :: .. ::: . CCDS10 MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTST 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 TLKTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQ----EWDGKESTITRKLKDG :..::... .:: ::: :.:::: ... .. . .. : :: .. ::.: . CCDS10 TVRTTEINFKVGEGFEEETVDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTRELAND 60 70 80 90 100 110 120 130 pF1KE6 KLVVECVMNNVTCTRIYEKVE .:.. ..:.::::: CCDS10 ELILTFGADDVVCTRIYVRE 120 130 >>CCDS3110.2 RBP1 gene_id:5947|Hs108|chr3 (197 aa) initn: 195 init1: 178 opt: 234 Z-score: 326.8 bits: 66.8 E(32554): 6.9e-12 Smith-Waterman score: 234; 32.1% identity (67.9% similar) in 131 aa overlap (9-135:69-197) 10 20 30 pF1KE6 MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAM : :... ...:.::.. : :..::::.. . CCDS31 GSRCPGSLQPSRPLVANWLQSLPEMPVDFTGYWKMLVNENFEEYLRALDVNVALRKIANL 40 50 60 70 80 90 40 50 60 70 80 90 pF1KE6 AKPDCIITCDGKNLTIKTESTLKTTQFSCTLGEKFEE--TTADGRKTQTVCNFTDGAL-- ::: :. :: .. :.: ::... .. .:..::: : : :: .:. .. : CCDS31 LKPDKEIVQDGDHMIIRTLSTFRNYIMDFQVGKEFEEDLTGIDDRKCMTTVSWDGDKLQC 100 110 120 130 140 150 100 110 120 130 pF1KE6 VQHQEWDGKESTITRKLKDGKLVVECVMNNVTCTRIYEKVE ::. : .:. :. .. .: .: ...:.: ....::. CCDS31 VQKGEKEGR--GWTQWIEGDELHLEMRVEGVVCKQVFKKVQ 160 170 180 190 135 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 09:32:56 2016 done: Tue Nov 8 09:32:56 2016 Total Scan time: 1.090 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]