FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3923, 447 aa 1>>>pF1KE3923 447 - 447 aa - 447 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6438+/-0.000887; mu= 17.4334+/- 0.054 mean_var=94.5389+/-18.327, 0's: 0 Z-trim(108.2): 13 B-trim: 44 in 1/52 Lambda= 0.131907 statistics sampled from 10076 (10084) to 10076 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.679), E-opt: 0.2 (0.31), width: 16 Scan time: 2.140 The best scores are: opt bits E(32554) CCDS5242.1 FBXO5 gene_id:26271|Hs108|chr6 ( 447) 2990 579.3 2.7e-165 CCDS47501.1 FBXO5 gene_id:26271|Hs108|chr6 ( 401) 2666 517.6 9.2e-147 CCDS47904.1 FBXO43 gene_id:286151|Hs108|chr8 ( 708) 356 78.2 3e-14 >>CCDS5242.1 FBXO5 gene_id:26271|Hs108|chr6 (447 aa) initn: 2990 init1: 2990 opt: 2990 Z-score: 3080.9 bits: 579.3 E(32554): 2.7e-165 Smith-Waterman score: 2990; 99.8% identity (100.0% similar) in 447 aa overlap (1-447:1-447) 10 20 30 40 50 60 pF1KE3 MSRRPCSCALRPPRCSCSASPSAVTAAGRPRPSDSCKEESSTLSVKMKCDFNCNHVHSGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 MSRRPCSCALRPPRCSCSASPSAVTAAGRPRPSDSCKEESSTLSVKMKCDFNCNHVHSGL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 KLVKPDDIGRLVSYTPAYLEGSCKDCIKDYERLSCIGSPIVSPRIVELETESKRLHNKEN ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: CCDS52 KLVKPDDIGRLVSYTPAYLEGSCKDCIKDYERLSCIGSPIVSPRIVQLETESKRLHNKEN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 QHVQQTLNSTNEIEALETSRLYEDSGYSSFSLQSGLSEHEEGSLLEENFGDSLQSCLLQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 QHVQQTLNSTNEIEALETSRLYEDSGYSSFSLQSGLSEHEEGSLLEENFGDSLQSCLLQI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 QSPDQYPNKNLLPVLHFEKVVCSTLKKNAKRNPKVDREMLKEIIARGNFRLQNIIGRKMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 QSPDQYPNKNLLPVLHFEKVVCSTLKKNAKRNPKVDREMLKEIIARGNFRLQNIIGRKMG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 LECVDILSELFRRGLRHVLATILAQLSDMDLINVSKVSTTWKKILEDDKGAFQLYSKAIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 LECVDILSELFRRGLRHVLATILAQLSDMDLINVSKVSTTWKKILEDDKGAFQLYSKAIQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 RVTENNNKFSPHASTREYVMFRTPLASVQKSAAQTSLKKDAQTKLSNQGDQKGSTYSRHN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 RVTENNNKFSPHASTREYVMFRTPLASVQKSAAQTSLKKDAQTKLSNQGDQKGSTYSRHN 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 EFSEVAKTLKKNESLKACIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNYHTTKDCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 EFSEVAKTLKKNESLKACIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNYHTTKDCS 370 380 390 400 410 420 430 440 pF1KE3 DGKLLKASCKIGPLPGTKKSKKNLRRL ::::::::::::::::::::::::::: CCDS52 DGKLLKASCKIGPLPGTKKSKKNLRRL 430 440 >>CCDS47501.1 FBXO5 gene_id:26271|Hs108|chr6 (401 aa) initn: 2666 init1: 2666 opt: 2666 Z-score: 2748.3 bits: 517.6 E(32554): 9.2e-147 Smith-Waterman score: 2666; 99.8% identity (100.0% similar) in 401 aa overlap (47-447:1-401) 20 30 40 50 60 70 pF1KE3 CSASPSAVTAAGRPRPSDSCKEESSTLSVKMKCDFNCNHVHSGLKLVKPDDIGRLVSYTP :::::::::::::::::::::::::::::: CCDS47 MKCDFNCNHVHSGLKLVKPDDIGRLVSYTP 10 20 30 80 90 100 110 120 130 pF1KE3 AYLEGSCKDCIKDYERLSCIGSPIVSPRIVELETESKRLHNKENQHVQQTLNSTNEIEAL ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: CCDS47 AYLEGSCKDCIKDYERLSCIGSPIVSPRIVQLETESKRLHNKENQHVQQTLNSTNEIEAL 40 50 60 70 80 90 140 150 160 170 180 190 pF1KE3 ETSRLYEDSGYSSFSLQSGLSEHEEGSLLEENFGDSLQSCLLQIQSPDQYPNKNLLPVLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 ETSRLYEDSGYSSFSLQSGLSEHEEGSLLEENFGDSLQSCLLQIQSPDQYPNKNLLPVLH 100 110 120 130 140 150 200 210 220 230 240 250 pF1KE3 FEKVVCSTLKKNAKRNPKVDREMLKEIIARGNFRLQNIIGRKMGLECVDILSELFRRGLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 FEKVVCSTLKKNAKRNPKVDREMLKEIIARGNFRLQNIIGRKMGLECVDILSELFRRGLR 160 170 180 190 200 210 260 270 280 290 300 310 pF1KE3 HVLATILAQLSDMDLINVSKVSTTWKKILEDDKGAFQLYSKAIQRVTENNNKFSPHASTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 HVLATILAQLSDMDLINVSKVSTTWKKILEDDKGAFQLYSKAIQRVTENNNKFSPHASTR 220 230 240 250 260 270 320 330 340 350 360 370 pF1KE3 EYVMFRTPLASVQKSAAQTSLKKDAQTKLSNQGDQKGSTYSRHNEFSEVAKTLKKNESLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 EYVMFRTPLASVQKSAAQTSLKKDAQTKLSNQGDQKGSTYSRHNEFSEVAKTLKKNESLK 280 290 300 310 320 330 380 390 400 410 420 430 pF1KE3 ACIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNYHTTKDCSDGKLLKASCKIGPLPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 ACIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNYHTTKDCSDGKLLKASCKIGPLPG 340 350 360 370 380 390 440 pF1KE3 TKKSKKNLRRL ::::::::::: CCDS47 TKKSKKNLRRL 400 >>CCDS47904.1 FBXO43 gene_id:286151|Hs108|chr8 (708 aa) initn: 518 init1: 258 opt: 356 Z-score: 369.3 bits: 78.2 E(32554): 3e-14 Smith-Waterman score: 535; 31.4% identity (60.9% similar) in 379 aa overlap (80-447:352-708) 50 60 70 80 90 100 pF1KE3 DFNCNHVHSGLKLVKPDDIGRLVSYTPAYLEGSCKDCIKDYERLSCIGSPIVSPRIVELE ::: .. .. .. .:. : . : . CCDS47 PEVRGSISTPEDSGFNSLSLEKSEDSLSDQEGSFQELLQKHKGTPKVGDTIRKTRHL--- 330 340 350 360 370 110 120 130 140 150 160 pF1KE3 TESKRLHNKENQHVQQTLNSTNEIEALETSRLYEDSGYSSFSLQSGLSEHEEGSLLEENF .:.:: . ..: :. :. : ... . .. . . :..:: :.: .. CCDS47 GRSRRLSTLREQSSQS--------ETEEEKQIVHPDSEKRAAAASAISE---GQLSSDES 380 390 400 410 420 170 180 190 200 210 220 pF1KE3 GDSLQSCLLQIQSPDQYPNKNLLPVLHFEKVVCSTLKKNAKRNPKVDREMLKEIIARGNF :: ..... .. : .:. : : : . :..:. . . .. : :: . CCDS47 GD----LTFSLKNLSKTPALQLVHEL-FMKSKRKRLQENSGH--EFLEQGDGEKIAVLQC 430 440 450 460 470 480 230 240 250 260 270 280 pF1KE3 RLQNIIGRKMGLECVDILSELFRRGLRHVLATILAQLSDMDLINVSKVSTTWKKILEDDK : ..::.:::.: .:::.:: :.:.:.:: .: .:. .: .: ::: .:..:. .:: CCDS47 ILAGLIGKKMGIEKLDILTELKYRNLKHILAMVLESLTAESLCSVWKVSRNWREIVVQDK 490 500 510 520 530 540 290 300 310 320 330 340 pF1KE3 GA---FQLYSKAIQRVTENNNKFSPHASTREYVMFRTPLASVQKSAAQTSLKKDAQTKLS .: ..: .. .:. :.:: .. :. : ::: .: . ... . :: CCDS47 NANRRRKFYITQLKTDSEGAVLNVEDAATRLQLLNRSALRSVQAQARIPGSQREQGSTLS 550 560 570 580 590 600 350 360 370 380 390 pF1KE3 NQGD------QKGSTY--SRHNEFSEVAKTLKKNESLKACIRCNSPAKYDCYLQRATCKR :. ... :. :...:. .::::: .:.:: : ::.:::::. : .:. :.: CCDS47 PWGEVLTPLASSSVTHLSSKQEEYVKVAKTLFTDEALKPCPRCQSPAKYQPYKKRGLCSR 610 620 630 640 650 660 400 410 420 430 440 pF1KE3 EGCGFDYCTKCLCNYHTTKDCSDGKLLKASCKIGPLPGTKKSKKNLRRL .::::.:. ::: :: ...:: : : . :::. .::.::.:: CCDS47 TACGFDFCVLCLCAYHGSEECSRGAA-KPRNRKDALPGSAQSKRNLKRL 670 680 690 700 447 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 08:54:35 2016 done: Sun Nov 6 08:54:36 2016 Total Scan time: 2.140 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]