FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4375, 395 aa 1>>>pF1KE4375 395 - 395 aa - 395 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.7536+/-0.000965; mu= 14.3992+/- 0.058 mean_var=68.0716+/-13.829, 0's: 0 Z-trim(104.9): 11 B-trim: 41 in 1/49 Lambda= 0.155450 statistics sampled from 8129 (8131) to 8129 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.622), E-opt: 0.2 (0.25), width: 16 Scan time: 2.390 The best scores are: opt bits E(32554) CCDS7365.1 MAT1A gene_id:4143|Hs108|chr10 ( 395) 2662 606.1 1.7e-173 CCDS1977.1 MAT2A gene_id:4144|Hs108|chr2 ( 395) 2311 527.4 8.6e-150 >>CCDS7365.1 MAT1A gene_id:4143|Hs108|chr10 (395 aa) initn: 2662 init1: 2662 opt: 2662 Z-score: 3228.1 bits: 606.1 E(32554): 1.7e-173 Smith-Waterman score: 2662; 100.0% identity (100.0% similar) in 395 aa overlap (1-395:1-395) 10 20 30 40 50 60 pF1KE4 MNGPVDGLCDHSLSEGVFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 MNGPVDGLCDHSLSEGVFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 KTGMVLLCGEITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 KTGMVLLCGEITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQC 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 VHLDRNEEDVGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 VHLDRNEEDVGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 KTQVTVQYMQDNGAVIPVRIHTIVISVQHNEDITLEEMRRALKEQVIRAVVPAKYLDEDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 KTQVTVQYMQDNGAVIPVRIHTIVISVQHNEDITLEEMRRALKEQVIRAVVPAKYLDEDT 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 VYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 VYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARW 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 VAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFTYGTSQKTERELLDVVHKNFDLRPGVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 VAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFTYGTSQKTERELLDVVHKNFDLRPGVI 310 320 330 340 350 360 370 380 390 pF1KE4 VRDLDLKKPIYQKTACYGHFGRSEFPWEVPRKLVF ::::::::::::::::::::::::::::::::::: CCDS73 VRDLDLKKPIYQKTACYGHFGRSEFPWEVPRKLVF 370 380 390 >>CCDS1977.1 MAT2A gene_id:4144|Hs108|chr2 (395 aa) initn: 2339 init1: 2311 opt: 2311 Z-score: 2802.7 bits: 527.4 E(32554): 8.6e-150 Smith-Waterman score: 2311; 84.3% identity (95.4% similar) in 395 aa overlap (1-395:1-395) 10 20 30 40 50 60 pF1KE4 MNGPVDGLCDHSLSEGVFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVC ::: ..:. . . ::.:.:::::::::::::::::::::::::::.:::.:::::::: CCDS19 MNGQLNGFHEAFIEEGTFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 KTGMVLLCGEITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQC ::::.:: ::::: : ::::.:::...::::::::.::::.:::::::::::::::::: CCDS19 KTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 VHLDRNEEDVGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDS :::::::::.::::::::::::::::::::::::.:::::::..:.:::.: :::::::: CCDS19 VHLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 KTQVTVQYMQDNGAVIPVRIHTIVISVQHNEDITLEEMRRALKEQVIRAVVPAKYLDEDT ::::::::::: :::.:.:.:::::::::.:.. :.::: ::::.::.:::::::::::: CCDS19 KTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDT 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 VYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARW .:::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: CCDS19 IYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARW 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 VAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFTYGTSQKTERELLDVVHKNFDLRPGVI :::::::.::::::::::::::::..::::::: ::::::.:::::..:.:::::::::: CCDS19 VAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVI 310 320 330 340 350 360 370 380 390 pF1KE4 VRDLDLKKPIYQKTACYGHFGRSEFPWEVPRKLVF ::::::::::::.:: ::::::. ::::::.:: . CCDS19 VRDLDLKKPIYQRTAAYGHFGRDSFPWEVPKKLKY 370 380 390 395 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 17:39:18 2016 done: Mon Nov 7 17:39:19 2016 Total Scan time: 2.390 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]