Result of FASTA (omim) for pFN21AE3639
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE3639, 379 aa
  1>>>pF1KE3639 379 - 379 aa - 379 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.7265+/-0.000492; mu= 11.0754+/- 0.030
 mean_var=260.2587+/-51.709, 0's: 0 Z-trim(117.4): 363  B-trim: 42 in 2/49
 Lambda= 0.079501
 statistics sampled from 28867 (29322) to 28867 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.694), E-opt: 0.2 (0.344), width:  16
 Scan time:  8.520

The best scores are:                                      opt bits E(85289)
NP_009122 (OMIM: 605186) wnt inhibitory factor 1 p ( 379) 2807 335.6 1.2e-91
XP_005266009 (OMIM: 610119) PREDICTED: teneurin-2  (2378)  489 71.0 3.3e-11
NP_001073897 (OMIM: 610119) teneurin-2 isoform 2 [ (2535)  489 71.0 3.4e-11
XP_016865158 (OMIM: 610119) PREDICTED: teneurin-2  (2577)  489 71.0 3.5e-11
XP_016865157 (OMIM: 610119) PREDICTED: teneurin-2  (2577)  489 71.0 3.5e-11
XP_016865155 (OMIM: 610119) PREDICTED: teneurin-2  (2615)  489 71.0 3.5e-11
XP_016865154 (OMIM: 610119) PREDICTED: teneurin-2  (2622)  489 71.0 3.5e-11
XP_016865153 (OMIM: 610119) PREDICTED: teneurin-2  (2653)  489 71.0 3.5e-11
XP_016865152 (OMIM: 610119) PREDICTED: teneurin-2  (2699)  489 71.1 3.5e-11
XP_016865151 (OMIM: 610119) PREDICTED: teneurin-2  (2704)  489 71.1 3.6e-11
XP_016865150 (OMIM: 610119) PREDICTED: teneurin-2  (2767)  489 71.1 3.6e-11
XP_016865149 (OMIM: 610119) PREDICTED: teneurin-2  (2774)  489 71.1 3.6e-11
NP_061978 (OMIM: 600985,606408,615963) tenascin-X  (4242)  480 70.3 9.2e-11
XP_016863885 (OMIM: 610083,615145) PREDICTED: tene (2443)  470 68.8 1.5e-10
XP_016863884 (OMIM: 610083,615145) PREDICTED: tene (2551)  470 68.8 1.6e-10
XP_016863883 (OMIM: 610083,615145) PREDICTED: tene (2622)  470 68.9 1.6e-10
XP_016863880 (OMIM: 610083,615145) PREDICTED: tene (2707)  470 68.9 1.6e-10
XP_016863879 (OMIM: 610083,615145) PREDICTED: tene (2708)  470 68.9 1.6e-10
XP_016863878 (OMIM: 610083,615145) PREDICTED: tene (2714)  470 68.9 1.6e-10
XP_016863875 (OMIM: 610083,615145) PREDICTED: tene (2715)  470 68.9 1.6e-10
XP_016863874 (OMIM: 610083,615145) PREDICTED: tene (2715)  470 68.9 1.6e-10
XP_016863876 (OMIM: 610083,615145) PREDICTED: tene (2715)  470 68.9 1.6e-10
XP_016863877 (OMIM: 610083,615145) PREDICTED: tene (2715)  470 68.9 1.6e-10
XP_005252032 (OMIM: 187380,615629) PREDICTED: tena (1564)  440 65.1 1.3e-09
XP_005252031 (OMIM: 187380,615629) PREDICTED: tena (1655)  440 65.1 1.3e-09
XP_006717164 (OMIM: 187380,615629) PREDICTED: tena (1655)  440 65.1 1.3e-09
XP_011516931 (OMIM: 187380,615629) PREDICTED: tena (1746)  440 65.1 1.4e-09
XP_011516930 (OMIM: 187380,615629) PREDICTED: tena (1746)  440 65.1 1.4e-09
XP_005252030 (OMIM: 187380,615629) PREDICTED: tena (1837)  440 65.2 1.4e-09
XP_011516928 (OMIM: 187380,615629) PREDICTED: tena (1929)  440 65.2 1.5e-09
XP_011516927 (OMIM: 187380,615629) PREDICTED: tena (2019)  440 65.2 1.5e-09
XP_006717161 (OMIM: 187380,615629) PREDICTED: tena (2019)  440 65.2 1.5e-09
XP_016870170 (OMIM: 187380,615629) PREDICTED: tena (2020)  440 65.2 1.5e-09
XP_005252029 (OMIM: 187380,615629) PREDICTED: tena (2110)  440 65.3 1.5e-09
XP_006717160 (OMIM: 187380,615629) PREDICTED: tena (2110)  440 65.3 1.5e-09
NP_002151 (OMIM: 187380,615629) tenascin precursor (2201)  440 65.3 1.6e-09
XP_016870169 (OMIM: 187380,615629) PREDICTED: tena (2292)  440 65.3 1.6e-09
XP_006717159 (OMIM: 187380,615629) PREDICTED: tena (2293)  440 65.3 1.6e-09
XP_016870168 (OMIM: 187380,615629) PREDICTED: tena (2293)  440 65.3 1.6e-09
XP_016870167 (OMIM: 187380,615629) PREDICTED: tena (2384)  440 65.4 1.6e-09
XP_016884705 (OMIM: 300588) PREDICTED: teneurin-1  (1239)  430 63.8 2.5e-09
XP_016884704 (OMIM: 300588) PREDICTED: teneurin-1  (1246)  430 63.8 2.6e-09
NP_055068 (OMIM: 300588) teneurin-1 isoform 3 [Hom (2725)  430 64.3 3.9e-09
XP_016884703 (OMIM: 300588) PREDICTED: teneurin-1  (2725)  430 64.3 3.9e-09
NP_001156751 (OMIM: 300588) teneurin-1 isoform 2 [ (2731)  430 64.3 3.9e-09
XP_011529532 (OMIM: 300588) PREDICTED: teneurin-1  (2732)  430 64.3 3.9e-09
NP_001156750 (OMIM: 300588) teneurin-1 isoform 1 [ (2732)  430 64.3 3.9e-09
XP_016884699 (OMIM: 300588) PREDICTED: teneurin-1  (2765)  430 64.3 3.9e-09
XP_016884700 (OMIM: 300588) PREDICTED: teneurin-1  (2765)  430 64.3 3.9e-09
XP_016884701 (OMIM: 300588) PREDICTED: teneurin-1  (2765)  430 64.3 3.9e-09


>>NP_009122 (OMIM: 605186) wnt inhibitory factor 1 precu  (379 aa)
 initn: 2807 init1: 2807 opt: 2807  Z-score: 1766.7  bits: 335.6 E(85289): 1.2e-91
Smith-Waterman score: 2807; 99.7% identity (100.0% similar) in 379 aa overlap (1-379:1-379)

               10        20        30        40        50        60
pF1KE3 MARRSAFPAAALWLWSILLCLLALRAEAGPPQEESLYLWIDAHQARVLIGFEEDILIVSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 MARRSAFPAAALWLWSILLCLLALRAEAGPPQEESLYLWIDAHQARVLIGFEEDILIVSE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 GKMAPFTHDFRKAQQRMPAIPVNIHSMNFTWQAAGQAEYFYEFLSLRSLDKGIMADPTVN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 GKMAPFTHDFRKAQQRMPAIPVNIHSMNFTWQAAGQAEYFYEFLSLRSLDKGIMADPTVN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 VPLLGTVPHKASVVQVGFPCLGKQDGVAAFEVDVIVMNSEGNTILKTPQNAIFFKTCQQA
       :::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::
NP_009 VPLLGTVPHKASVVQVGFPCLGKQDGVAAFEVDVIVMNSEGNTILQTPQNAIFFKTCQQA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE3 ECPGGCRNGGFCNERRICECPDGFHGPHCEKALCTPRCMNGGLCVTPGFCICPPGFYGVN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 ECPGGCRNGGFCNERRICECPDGFHGPHCEKALCTPRCMNGGLCVTPGFCICPPGFYGVN
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE3 CDKANCSTTCFNGGTCFYPGKCICPPGLEGEQCEISKCPQPCRNGGKCIGKSKCKCSKGY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 CDKANCSTTCFNGGTCFYPGKCICPPGLEGEQCEISKCPQPCRNGGKCIGKSKCKCSKGY
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE3 QGDLCSKPVCEPGCGAHGTCHEPNKCQCQEGWHGRHCNKRYEASLIHALRPAGAQLRQHT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 QGDLCSKPVCEPGCGAHGTCHEPNKCQCQEGWHGRHCNKRYEASLIHALRPAGAQLRQHT
              310       320       330       340       350       360

              370         
pF1KE3 PSLKKAEERRDPPESNYIW
       :::::::::::::::::::
NP_009 PSLKKAEERRDPPESNYIW
              370         

>>XP_005266009 (OMIM: 610119) PREDICTED: teneurin-2 isof  (2378 aa)
 initn: 307 init1: 103 opt: 489  Z-score: 322.2  bits: 71.0 E(85289): 3.3e-11
Smith-Waterman score: 489; 40.1% identity (63.1% similar) in 157 aa overlap (186-337:249-400)

         160       170       180       190       200       210     
pF1KE3 VMNSEGNTILKTPQNAIFFKTCQQAECPGGCRNGGFCNERRICECPDGFHGPHCEKALCT
                                     : . : : .   : :  :..: :::.. : 
XP_005 GQYSKGTCQCYSGWKGAECDVPMNQCIDPSCGGHGSCIDGN-CVCSAGYKGEHCEEVDCL
      220       230       240       250        260       270       

          220       230       240         250         260       270
pF1KE3 -PRCMNGGLCVTPGFCICPPGFYGVNCD--KANCSTTCFNGGTCFYP--GKCICPPGLEG
        : : . :.::. : :.: ::. :.::.  ...:   : . :: . :  : : : :.  :
XP_005 DPTCSSHGVCVN-GECLCSPGWGGLNCELARVQCPDQCSGHGT-YLPDTGLCSCDPNWMG
       280        290       300       310        320       330     

              280       290       300       310       320       330
pF1KE3 EQCEISKCPQPCRNGGKCIGKSKCKCSKGYQGDLCSKPVCEPGCGAHGTCHEPNKCQCQE
        .: .  :   : . : ::: . :.: .:. :  :.. ::.: :  ::::.. .::.:.:
XP_005 PDCSVEVCSVDCGTHGVCIG-GACRCEEGWTGAACDQRVCHPRCIEHGTCKD-GKCECRE
         340       350        360       370       380        390   

              340       350       360       370                    
pF1KE3 GWHGRHCNKRYEASLIHALRPAGAQLRQHTPSLKKAEERRDPPESNYIW           
       ::.:.::                                                     
XP_005 GWNGEHCTIGRQTAGTETDGCPDLCNGNGRCTLGQNSWQCVCQTGWRGPGCNVAMETSCA
           400       410       420       430       440       450   

>>NP_001073897 (OMIM: 610119) teneurin-2 isoform 2 [Homo  (2535 aa)
 initn: 307 init1: 103 opt: 489  Z-score: 321.9  bits: 71.0 E(85289): 3.4e-11
Smith-Waterman score: 489; 40.1% identity (63.1% similar) in 157 aa overlap (186-337:413-564)

         160       170       180       190       200       210     
pF1KE3 VMNSEGNTILKTPQNAIFFKTCQQAECPGGCRNGGFCNERRICECPDGFHGPHCEKALCT
                                     : . : : .   : :  :..: :::.. : 
NP_001 GQYSKGTCQCYSGWKGAECDVPMNQCIDPSCGGHGSCIDGN-CVCSAGYKGEHCEEVDCL
            390       400       410       420        430       440 

          220       230       240         250         260       270
pF1KE3 -PRCMNGGLCVTPGFCICPPGFYGVNCD--KANCSTTCFNGGTCFYP--GKCICPPGLEG
        : : . :.::. : :.: ::. :.::.  ...:   : . :: . :  : : : :.  :
NP_001 DPTCSSHGVCVN-GECLCSPGWGGLNCELARVQCPDQCSGHGT-YLPDTGLCSCDPNWMG
             450        460       470       480        490         

              280       290       300       310       320       330
pF1KE3 EQCEISKCPQPCRNGGKCIGKSKCKCSKGYQGDLCSKPVCEPGCGAHGTCHEPNKCQCQE
        .: .  :   : . : ::: . :.: .:. :  :.. ::.: :  ::::.. .::.:.:
NP_001 PDCSVEVCSVDCGTHGVCIG-GACRCEEGWTGAACDQRVCHPRCIEHGTCKD-GKCECRE
     500       510        520       530       540       550        

              340       350       360       370                    
pF1KE3 GWHGRHCNKRYEASLIHALRPAGAQLRQHTPSLKKAEERRDPPESNYIW           
       ::.:.::                                                     
NP_001 GWNGEHCTIGRQTAGTETDGCPDLCNGNGRCTLGQNSWQCVCQTGWRGPGCNVAMETSCA
       560       570       580       590       600       610       

>>XP_016865158 (OMIM: 610119) PREDICTED: teneurin-2 isof  (2577 aa)
 initn: 307 init1: 103 opt: 489  Z-score: 321.8  bits: 71.0 E(85289): 3.5e-11
Smith-Waterman score: 489; 40.1% identity (63.1% similar) in 157 aa overlap (186-337:448-599)

         160       170       180       190       200       210     
pF1KE3 VMNSEGNTILKTPQNAIFFKTCQQAECPGGCRNGGFCNERRICECPDGFHGPHCEKALCT
                                     : . : : .   : :  :..: :::.. : 
XP_016 GQYSKGTCQCYSGWKGAECDVPMNQCIDPSCGGHGSCIDGN-CVCSAGYKGEHCEEVDCL
       420       430       440       450        460       470      

          220       230       240         250         260       270
pF1KE3 -PRCMNGGLCVTPGFCICPPGFYGVNCD--KANCSTTCFNGGTCFYP--GKCICPPGLEG
        : : . :.::. : :.: ::. :.::.  ...:   : . :: . :  : : : :.  :
XP_016 DPTCSSHGVCVN-GECLCSPGWGGLNCELARVQCPDQCSGHGT-YLPDTGLCSCDPNWMG
        480        490       500       510        520       530    

              280       290       300       310       320       330
pF1KE3 EQCEISKCPQPCRNGGKCIGKSKCKCSKGYQGDLCSKPVCEPGCGAHGTCHEPNKCQCQE
        .: .  :   : . : ::: . :.: .:. :  :.. ::.: :  ::::.. .::.:.:
XP_016 PDCSVEVCSVDCGTHGVCIG-GACRCEEGWTGAACDQRVCHPRCIEHGTCKD-GKCECRE
          540       550        560       570       580        590  

              340       350       360       370                    
pF1KE3 GWHGRHCNKRYEASLIHALRPAGAQLRQHTPSLKKAEERRDPPESNYIW           
       ::.:.::                                                     
XP_016 GWNGEHCTIGRQTAGTETDGCPDLCNGNGRCTLGQNSWQCVCQTGWRGPGCNVAMETSCA
            600       610       620       630       640       650  

>>XP_016865157 (OMIM: 610119) PREDICTED: teneurin-2 isof  (2577 aa)
 initn: 307 init1: 103 opt: 489  Z-score: 321.8  bits: 71.0 E(85289): 3.5e-11
Smith-Waterman score: 489; 40.1% identity (63.1% similar) in 157 aa overlap (186-337:448-599)

         160       170       180       190       200       210     
pF1KE3 VMNSEGNTILKTPQNAIFFKTCQQAECPGGCRNGGFCNERRICECPDGFHGPHCEKALCT
                                     : . : : .   : :  :..: :::.. : 
XP_016 GQYSKGTCQCYSGWKGAECDVPMNQCIDPSCGGHGSCIDGN-CVCSAGYKGEHCEEVDCL
       420       430       440       450        460       470      

          220       230       240         250         260       270
pF1KE3 -PRCMNGGLCVTPGFCICPPGFYGVNCD--KANCSTTCFNGGTCFYP--GKCICPPGLEG
        : : . :.::. : :.: ::. :.::.  ...:   : . :: . :  : : : :.  :
XP_016 DPTCSSHGVCVN-GECLCSPGWGGLNCELARVQCPDQCSGHGT-YLPDTGLCSCDPNWMG
        480        490       500       510        520       530    

              280       290       300       310       320       330
pF1KE3 EQCEISKCPQPCRNGGKCIGKSKCKCSKGYQGDLCSKPVCEPGCGAHGTCHEPNKCQCQE
        .: .  :   : . : ::: . :.: .:. :  :.. ::.: :  ::::.. .::.:.:
XP_016 PDCSVEVCSVDCGTHGVCIG-GACRCEEGWTGAACDQRVCHPRCIEHGTCKD-GKCECRE
          540       550        560       570       580        590  

              340       350       360       370                    
pF1KE3 GWHGRHCNKRYEASLIHALRPAGAQLRQHTPSLKKAEERRDPPESNYIW           
       ::.:.::                                                     
XP_016 GWNGEHCTIGRQTAGTETDGCPDLCNGNGRCTLGQNSWQCVCQTGWRGPGCNVAMETSCA
            600       610       620       630       640       650  

>>XP_016865155 (OMIM: 610119) PREDICTED: teneurin-2 isof  (2615 aa)
 initn: 307 init1: 103 opt: 489  Z-score: 321.8  bits: 71.0 E(85289): 3.5e-11
Smith-Waterman score: 489; 40.1% identity (63.1% similar) in 157 aa overlap (186-337:493-644)

         160       170       180       190       200       210     
pF1KE3 VMNSEGNTILKTPQNAIFFKTCQQAECPGGCRNGGFCNERRICECPDGFHGPHCEKALCT
                                     : . : : .   : :  :..: :::.. : 
XP_016 GQYSKGTCQCYSGWKGAECDVPMNQCIDPSCGGHGSCIDGN-CVCSAGYKGEHCEEVDCL
            470       480       490       500        510       520 

          220       230       240         250         260       270
pF1KE3 -PRCMNGGLCVTPGFCICPPGFYGVNCD--KANCSTTCFNGGTCFYP--GKCICPPGLEG
        : : . :.::. : :.: ::. :.::.  ...:   : . :: . :  : : : :.  :
XP_016 DPTCSSHGVCVN-GECLCSPGWGGLNCELARVQCPDQCSGHGT-YLPDTGLCSCDPNWMG
             530        540       550       560        570         

              280       290       300       310       320       330
pF1KE3 EQCEISKCPQPCRNGGKCIGKSKCKCSKGYQGDLCSKPVCEPGCGAHGTCHEPNKCQCQE
        .: .  :   : . : ::: . :.: .:. :  :.. ::.: :  ::::.. .::.:.:
XP_016 PDCSVEVCSVDCGTHGVCIG-GACRCEEGWTGAACDQRVCHPRCIEHGTCKD-GKCECRE
     580       590        600       610       620       630        

              340       350       360       370                    
pF1KE3 GWHGRHCNKRYEASLIHALRPAGAQLRQHTPSLKKAEERRDPPESNYIW           
       ::.:.::                                                     
XP_016 GWNGEHCTIGRQTAGTETDGCPDLCNGNGRCTLGQNSWQCVCQTGWRGPGCNVAMETSCA
       640       650       660       670       680       690       

>>XP_016865154 (OMIM: 610119) PREDICTED: teneurin-2 isof  (2622 aa)
 initn: 307 init1: 103 opt: 489  Z-score: 321.8  bits: 71.0 E(85289): 3.5e-11
Smith-Waterman score: 489; 40.1% identity (63.1% similar) in 157 aa overlap (186-337:493-644)

         160       170       180       190       200       210     
pF1KE3 VMNSEGNTILKTPQNAIFFKTCQQAECPGGCRNGGFCNERRICECPDGFHGPHCEKALCT
                                     : . : : .   : :  :..: :::.. : 
XP_016 GQYSKGTCQCYSGWKGAECDVPMNQCIDPSCGGHGSCIDGN-CVCSAGYKGEHCEEVDCL
            470       480       490       500        510       520 

          220       230       240         250         260       270
pF1KE3 -PRCMNGGLCVTPGFCICPPGFYGVNCD--KANCSTTCFNGGTCFYP--GKCICPPGLEG
        : : . :.::. : :.: ::. :.::.  ...:   : . :: . :  : : : :.  :
XP_016 DPTCSSHGVCVN-GECLCSPGWGGLNCELARVQCPDQCSGHGT-YLPDTGLCSCDPNWMG
             530        540       550       560        570         

              280       290       300       310       320       330
pF1KE3 EQCEISKCPQPCRNGGKCIGKSKCKCSKGYQGDLCSKPVCEPGCGAHGTCHEPNKCQCQE
        .: .  :   : . : ::: . :.: .:. :  :.. ::.: :  ::::.. .::.:.:
XP_016 PDCSVEVCSVDCGTHGVCIG-GACRCEEGWTGAACDQRVCHPRCIEHGTCKD-GKCECRE
     580       590        600       610       620       630        

              340       350       360       370                    
pF1KE3 GWHGRHCNKRYEASLIHALRPAGAQLRQHTPSLKKAEERRDPPESNYIW           
       ::.:.::                                                     
XP_016 GWNGEHCTIGRQTAGTETDGCPDLCNGNGRCTLGQNSWQCVCQTGWRGPGCNVAMETSCA
       640       650       660       670       680       690       

>>XP_016865153 (OMIM: 610119) PREDICTED: teneurin-2 isof  (2653 aa)
 initn: 307 init1: 103 opt: 489  Z-score: 321.7  bits: 71.0 E(85289): 3.5e-11
Smith-Waterman score: 489; 40.1% identity (63.1% similar) in 157 aa overlap (186-337:524-675)

         160       170       180       190       200       210     
pF1KE3 VMNSEGNTILKTPQNAIFFKTCQQAECPGGCRNGGFCNERRICECPDGFHGPHCEKALCT
                                     : . : : .   : :  :..: :::.. : 
XP_016 GQYSKGTCQCYSGWKGAECDVPMNQCIDPSCGGHGSCIDGN-CVCSAGYKGEHCEEVDCL
           500       510       520       530        540       550  

          220       230       240         250         260       270
pF1KE3 -PRCMNGGLCVTPGFCICPPGFYGVNCD--KANCSTTCFNGGTCFYP--GKCICPPGLEG
        : : . :.::. : :.: ::. :.::.  ...:   : . :: . :  : : : :.  :
XP_016 DPTCSSHGVCVN-GECLCSPGWGGLNCELARVQCPDQCSGHGT-YLPDTGLCSCDPNWMG
            560        570       580       590        600       610

              280       290       300       310       320       330
pF1KE3 EQCEISKCPQPCRNGGKCIGKSKCKCSKGYQGDLCSKPVCEPGCGAHGTCHEPNKCQCQE
        .: .  :   : . : ::: . :.: .:. :  :.. ::.: :  ::::.. .::.:.:
XP_016 PDCSVEVCSVDCGTHGVCIG-GACRCEEGWTGAACDQRVCHPRCIEHGTCKD-GKCECRE
              620       630        640       650       660         

              340       350       360       370                    
pF1KE3 GWHGRHCNKRYEASLIHALRPAGAQLRQHTPSLKKAEERRDPPESNYIW           
       ::.:.::                                                     
XP_016 GWNGEHCTIGRQTAGTETDGCPDLCNGNGRCTLGQNSWQCVCQTGWRGPGCNVAMETSCA
      670       680       690       700       710       720        

>>XP_016865152 (OMIM: 610119) PREDICTED: teneurin-2 isof  (2699 aa)
 initn: 307 init1: 103 opt: 489  Z-score: 321.6  bits: 71.1 E(85289): 3.5e-11
Smith-Waterman score: 489; 40.1% identity (63.1% similar) in 157 aa overlap (186-337:570-721)

         160       170       180       190       200       210     
pF1KE3 VMNSEGNTILKTPQNAIFFKTCQQAECPGGCRNGGFCNERRICECPDGFHGPHCEKALCT
                                     : . : : .   : :  :..: :::.. : 
XP_016 GQYSKGTCQCYSGWKGAECDVPMNQCIDPSCGGHGSCIDGN-CVCSAGYKGEHCEEVDCL
     540       550       560       570       580        590        

          220       230       240         250         260       270
pF1KE3 -PRCMNGGLCVTPGFCICPPGFYGVNCD--KANCSTTCFNGGTCFYP--GKCICPPGLEG
        : : . :.::. : :.: ::. :.::.  ...:   : . :: . :  : : : :.  :
XP_016 DPTCSSHGVCVN-GECLCSPGWGGLNCELARVQCPDQCSGHGT-YLPDTGLCSCDPNWMG
      600       610        620       630       640        650      

              280       290       300       310       320       330
pF1KE3 EQCEISKCPQPCRNGGKCIGKSKCKCSKGYQGDLCSKPVCEPGCGAHGTCHEPNKCQCQE
        .: .  :   : . : ::: . :.: .:. :  :.. ::.: :  ::::.. .::.:.:
XP_016 PDCSVEVCSVDCGTHGVCIG-GACRCEEGWTGAACDQRVCHPRCIEHGTCKD-GKCECRE
        660       670        680       690       700        710    

              340       350       360       370                    
pF1KE3 GWHGRHCNKRYEASLIHALRPAGAQLRQHTPSLKKAEERRDPPESNYIW           
       ::.:.::                                                     
XP_016 GWNGEHCTIGRQTAGTETDGCPDLCNGNGRCTLGQNSWQCVCQTGWRGPGCNVAMETSCA
          720       730       740       750       760       770    

>>XP_016865151 (OMIM: 610119) PREDICTED: teneurin-2 isof  (2704 aa)
 initn: 307 init1: 103 opt: 489  Z-score: 321.6  bits: 71.1 E(85289): 3.6e-11
Smith-Waterman score: 489; 40.1% identity (63.1% similar) in 157 aa overlap (186-337:575-726)

         160       170       180       190       200       210     
pF1KE3 VMNSEGNTILKTPQNAIFFKTCQQAECPGGCRNGGFCNERRICECPDGFHGPHCEKALCT
                                     : . : : .   : :  :..: :::.. : 
XP_016 GQYSKGTCQCYSGWKGAECDVPMNQCIDPSCGGHGSCIDGN-CVCSAGYKGEHCEEVDCL
          550       560       570       580        590       600   

          220       230       240         250         260       270
pF1KE3 -PRCMNGGLCVTPGFCICPPGFYGVNCD--KANCSTTCFNGGTCFYP--GKCICPPGLEG
        : : . :.::. : :.: ::. :.::.  ...:   : . :: . :  : : : :.  :
XP_016 DPTCSSHGVCVN-GECLCSPGWGGLNCELARVQCPDQCSGHGT-YLPDTGLCSCDPNWMG
           610        620       630       640        650       660 

              280       290       300       310       320       330
pF1KE3 EQCEISKCPQPCRNGGKCIGKSKCKCSKGYQGDLCSKPVCEPGCGAHGTCHEPNKCQCQE
        .: .  :   : . : ::: . :.: .:. :  :.. ::.: :  ::::.. .::.:.:
XP_016 PDCSVEVCSVDCGTHGVCIG-GACRCEEGWTGAACDQRVCHPRCIEHGTCKD-GKCECRE
             670       680        690       700       710          

              340       350       360       370                    
pF1KE3 GWHGRHCNKRYEASLIHALRPAGAQLRQHTPSLKKAEERRDPPESNYIW           
       ::.:.::                                                     
XP_016 GWNGEHCTIGRQTAGTETDGCPDLCNGNGRCTLGQNSWQCVCQTGWRGPGCNVAMETSCA
     720       730       740       750       760       770         




379 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Mon Nov  7 00:58:01 2016 done: Mon Nov  7 00:58:02 2016
 Total Scan time:  8.520 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com