FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3639, 379 aa 1>>>pF1KE3639 379 - 379 aa - 379 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6870+/-0.00127; mu= 17.5608+/- 0.076 mean_var=241.3993+/-44.692, 0's: 0 Z-trim(110.5): 161 B-trim: 18 in 2/49 Lambda= 0.082548 statistics sampled from 11506 (11671) to 11506 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.714), E-opt: 0.2 (0.359), width: 16 Scan time: 2.530 The best scores are: opt bits E(32554) CCDS8971.1 WIF1 gene_id:11197|Hs108|chr12 ( 379) 2807 347.6 1.1e-95 CCDS47544.1 VWDE gene_id:221806|Hs108|chr7 (1590) 658 92.8 2.3e-18 CCDS83040.1 TENM2 gene_id:57451|Hs108|chr5 (2535) 489 73.0 3.3e-12 >>CCDS8971.1 WIF1 gene_id:11197|Hs108|chr12 (379 aa) initn: 2807 init1: 2807 opt: 2807 Z-score: 1831.6 bits: 347.6 E(32554): 1.1e-95 Smith-Waterman score: 2807; 99.7% identity (100.0% similar) in 379 aa overlap (1-379:1-379) 10 20 30 40 50 60 pF1KE3 MARRSAFPAAALWLWSILLCLLALRAEAGPPQEESLYLWIDAHQARVLIGFEEDILIVSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS89 MARRSAFPAAALWLWSILLCLLALRAEAGPPQEESLYLWIDAHQARVLIGFEEDILIVSE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 GKMAPFTHDFRKAQQRMPAIPVNIHSMNFTWQAAGQAEYFYEFLSLRSLDKGIMADPTVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS89 GKMAPFTHDFRKAQQRMPAIPVNIHSMNFTWQAAGQAEYFYEFLSLRSLDKGIMADPTVN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 VPLLGTVPHKASVVQVGFPCLGKQDGVAAFEVDVIVMNSEGNTILKTPQNAIFFKTCQQA :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: CCDS89 VPLLGTVPHKASVVQVGFPCLGKQDGVAAFEVDVIVMNSEGNTILQTPQNAIFFKTCQQA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 ECPGGCRNGGFCNERRICECPDGFHGPHCEKALCTPRCMNGGLCVTPGFCICPPGFYGVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS89 ECPGGCRNGGFCNERRICECPDGFHGPHCEKALCTPRCMNGGLCVTPGFCICPPGFYGVN 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 CDKANCSTTCFNGGTCFYPGKCICPPGLEGEQCEISKCPQPCRNGGKCIGKSKCKCSKGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS89 CDKANCSTTCFNGGTCFYPGKCICPPGLEGEQCEISKCPQPCRNGGKCIGKSKCKCSKGY 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 QGDLCSKPVCEPGCGAHGTCHEPNKCQCQEGWHGRHCNKRYEASLIHALRPAGAQLRQHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS89 QGDLCSKPVCEPGCGAHGTCHEPNKCQCQEGWHGRHCNKRYEASLIHALRPAGAQLRQHT 310 320 330 340 350 360 370 pF1KE3 PSLKKAEERRDPPESNYIW ::::::::::::::::::: CCDS89 PSLKKAEERRDPPESNYIW 370 >>CCDS47544.1 VWDE gene_id:221806|Hs108|chr7 (1590 aa) initn: 1262 init1: 658 opt: 658 Z-score: 443.2 bits: 92.8 E(32554): 2.3e-18 Smith-Waterman score: 658; 44.2% identity (67.5% similar) in 163 aa overlap (176-338:1356-1518) 150 160 170 180 190 200 pF1KE3 GVAAFEVDVIVMNSEGNTILKTPQNAIFFKTCQQAECPGGCRNGGFCNERRICECPDGFH ::.. .: :..:: : .: :: :: CCDS47 QTALCDPDCKNHGKCIKPNICQCLPGHGGATCDEEHCNPPCQHGGTCLAGNLCTCPYGFV 1330 1340 1350 1360 1370 1380 210 220 230 240 250 260 pF1KE3 GPHCEKALCTPRCMNGGLCVTPGFCICPPGFYGVNCDKANCSTTCFNGGTCFYPGKCICP ::.:: .:. .: ::: :.:: .: : ::.:: .:. : :. .:.:::.: :. :.:: CCDS47 GPRCETMVCNRHCENGGQCLTPDICQCKPGWYGPTCSTALCDPVCLNGGSCNKPNTCLCP 1390 1400 1410 1420 1430 1440 270 280 290 300 310 320 pF1KE3 PGLEGEQCEISKCPQPCRNGGKCIGKSKCKCSKGYQGDLCSKPVCEPGCGAHGTCHEPNK :. ::.:. . : ::.:::.:. .. : : .:: : .: .:.: : : : :. CCDS47 NGFFGEHCQNAFCHPPCKNGGHCMRNNVCVCREGYTGRRFQKSICDPTCMNGGKCVGPST 1450 1460 1470 1480 1490 1500 330 340 350 360 370 pF1KE3 CQCQEGWHGRHCNKRYEASLIHALRPAGAQLRQHTPSLKKAEERRDPPESNYIW :.: :: :..:: CCDS47 CSCPSGWSGKRCNTPICLQKCKNGGECIAPSICHCPSSWEGVRCQIPICNPKCLYGGRCI 1510 1520 1530 1540 1550 1560 >>CCDS83040.1 TENM2 gene_id:57451|Hs108|chr5 (2535 aa) initn: 307 init1: 103 opt: 489 Z-score: 332.7 bits: 73.0 E(32554): 3.3e-12 Smith-Waterman score: 489; 40.1% identity (63.1% similar) in 157 aa overlap (186-337:413-564) 160 170 180 190 200 210 pF1KE3 VMNSEGNTILKTPQNAIFFKTCQQAECPGGCRNGGFCNERRICECPDGFHGPHCEKALCT : . : : . : : :..: :::.. : CCDS83 GQYSKGTCQCYSGWKGAECDVPMNQCIDPSCGGHGSCIDGN-CVCSAGYKGEHCEEVDCL 390 400 410 420 430 440 220 230 240 250 260 270 pF1KE3 -PRCMNGGLCVTPGFCICPPGFYGVNCD--KANCSTTCFNGGTCFYP--GKCICPPGLEG : : . :.::. : :.: ::. :.::. ...: : . :: . : : : : :. : CCDS83 DPTCSSHGVCVN-GECLCSPGWGGLNCELARVQCPDQCSGHGT-YLPDTGLCSCDPNWMG 450 460 470 480 490 280 290 300 310 320 330 pF1KE3 EQCEISKCPQPCRNGGKCIGKSKCKCSKGYQGDLCSKPVCEPGCGAHGTCHEPNKCQCQE .: . : : . : ::: . :.: .:. : :.. ::.: : ::::.. .::.:.: CCDS83 PDCSVEVCSVDCGTHGVCIG-GACRCEEGWTGAACDQRVCHPRCIEHGTCKD-GKCECRE 500 510 520 530 540 550 340 350 360 370 pF1KE3 GWHGRHCNKRYEASLIHALRPAGAQLRQHTPSLKKAEERRDPPESNYIW ::.:.:: CCDS83 GWNGEHCTIGRQTAGTETDGCPDLCNGNGRCTLGQNSWQCVCQTGWRGPGCNVAMETSCA 560 570 580 590 600 610 379 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 00:58:00 2016 done: Mon Nov 7 00:58:01 2016 Total Scan time: 2.530 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]