FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2404, 361 aa 1>>>pF1KE2404 361 - 361 aa - 361 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1418+/-0.000698; mu= 17.3088+/- 0.042 mean_var=63.0976+/-12.787, 0's: 0 Z-trim(108.9): 10 B-trim: 0 in 0/49 Lambda= 0.161461 statistics sampled from 10516 (10521) to 10516 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.706), E-opt: 0.2 (0.323), width: 16 Scan time: 2.770 The best scores are: opt bits E(32554) CCDS1656.1 RSAD2 gene_id:91543|Hs108|chr2 ( 361) 2462 581.9 2.9e-166 >>CCDS1656.1 RSAD2 gene_id:91543|Hs108|chr2 (361 aa) initn: 2462 init1: 2462 opt: 2462 Z-score: 3098.3 bits: 581.9 E(32554): 2.9e-166 Smith-Waterman score: 2462; 99.7% identity (99.7% similar) in 361 aa overlap (1-361:1-361) 10 20 30 40 50 60 pF1KE2 MWVLTPAAFAGKLLSVFRQPLSSLWRSLVPLFCWLRATFWLRATKRRKQQLVLRGPDETK ::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::: CCDS16 MWVLTPAAFAGKLLSVFRQPLSSLWRSLVPLFCWLRATFWLLATKRRKQQLVLRGPDETK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 EEEEDPPLPTTPTSVNYHFTRQCNYKCGFCFHTAKTSFVLPLEEAKRGLLLLKEAGMEKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 EEEEDPPLPTTPTSVNYHFTRQCNYKCGFCFHTAKTSFVLPLEEAKRGLLLLKEAGMEKI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 NFSGGEPFLQDRGEYLGKLVRFCKVELRLPSVSIVSNGSLIRERWFQNYGEYLDILAISC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 NFSGGEPFLQDRGEYLGKLVRFCKVELRLPSVSIVSNGSLIRERWFQNYGEYLDILAISC 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 DSFDEEVNVLIGRGQGKKNHVENLQKLRRWCRDYRVAFKINSVINRFNVEEDMTEQIKAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 DSFDEEVNVLIGRGQGKKNHVENLQKLRRWCRDYRVAFKINSVINRFNVEEDMTEQIKAL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 NPVRWKVFQCLLIEGENCGEDALREAERFVIGDEEFERFLERHKEVSCLVPESNQKMKDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 NPVRWKVFQCLLIEGENCGEDALREAERFVIGDEEFERFLERHKEVSCLVPESNQKMKDS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 YLILDEYMRFLNCRKGRKDPSKSILDVGVEEAIKFSGFDEKMFLKRGGKYIWSKADLKLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 YLILDEYMRFLNCRKGRKDPSKSILDVGVEEAIKFSGFDEKMFLKRGGKYIWSKADLKLD 310 320 330 340 350 360 pF1KE2 W : CCDS16 W 361 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 09:18:08 2016 done: Sun Nov 6 09:18:09 2016 Total Scan time: 2.770 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]