FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1491, 407 aa
  1>>>pF1KE1491 407 - 407 aa - 407 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 11.1915+/-0.000892; mu= -8.1246+/- 0.054
 mean_var=315.4687+/-64.179, 0's: 0 Z-trim(116.1): 4  B-trim: 0 in 0/53
 Lambda= 0.072210
 statistics sampled from 16652 (16655) to 16652 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.799), E-opt: 0.2 (0.512), width:  16
 Scan time:  3.790

The best scores are:                                      opt bits E(32554)
CCDS13496.1 ADRM1 gene_id:11047|Hs108|chr20        ( 407) 2682 292.4 5.2e-79
CCDS74747.1 ADRM1 gene_id:11047|Hs108|chr20        ( 368) 1924 213.4 2.8e-55


>>CCDS13496.1 ADRM1 gene_id:11047|Hs108|chr20             (407 aa)
 initn: 2682 init1: 2682 opt: 2682  Z-score: 1532.0  bits: 292.4 E(32554): 5.2e-79
Smith-Waterman score: 2682; 100.0% identity (100.0% similar) in 407 aa overlap (1-407:1-407)

               10        20        30        40        50        60
pF1KE1 MTTSGALFPSLVPGSRGASNKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MTTSGALFPSLVPGSRGASNKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 WKDRTSGNVEDDLIIFPDDCEFKRVPQCPSGRVYVLKFKAGSKRLFFWMQEPKTDQDEEH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 WKDRTSGNVEDDLIIFPDDCEFKRVPQCPSGRVYVLKFKAGSKRLFFWMQEPKTDQDEEH
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 CRKVNEYLNNPPMPGALGASGSSGHELSALGGEGGLQSLLGNMSHSQLMQLIGPAGLGGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 CRKVNEYLNNPPMPGALGASGSSGHELSALGGEGGLQSLLGNMSHSQLMQLIGPAGLGGL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 GGLGALTGPGLASLLGSSGPPGSSSSSSSRSQSAAVTPSSTTSSTRATPAPSAPAAASAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 GGLGALTGPGLASLLGSSGPPGSSSSSSSRSQSAAVTPSSTTSSTRATPAPSAPAAASAT
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE1 SPSPAPSSGNGASTAASPTQPIQLSDLQSILATMNVPAGPAGGQQVDLASVLTPEIMAPI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SPSPAPSSGNGASTAASPTQPIQLSDLQSILATMNVPAGPAGGQQVDLASVLTPEIMAPI
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE1 LANADVQERLLPYLPSGESLPQTADEIQNTLTSPQFQQALGMFSAALASGQLGPLMCQFG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LANADVQERLLPYLPSGESLPQTADEIQNTLTSPQFQQALGMFSAALASGQLGPLMCQFG
              310       320       330       340       350       360

              370       380       390       400       
pF1KE1 LPAEAVEAANKGDVEAFAKAMQNNAKPEQKEGDTKDKKDEEEDMSLD
       :::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LPAEAVEAANKGDVEAFAKAMQNNAKPEQKEGDTKDKKDEEEDMSLD
              370       380       390       400       

>>CCDS74747.1 ADRM1 gene_id:11047|Hs108|chr20             (368 aa)
 initn: 1924 init1: 1924 opt: 1924  Z-score: 1105.8  bits: 213.4 E(32554): 2.8e-55
Smith-Waterman score: 2308; 90.4% identity (90.4% similar) in 407 aa overlap (1-407:1-368)

               10        20        30        40        50        60
pF1KE1 MTTSGALFPSLVPGSRGASNKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 MTTSGALFPSLVPGSRGASNKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 WKDRTSGNVEDDLIIFPDDCEFKRVPQCPSGRVYVLKFKAGSKRLFFWMQEPKTDQDEEH
       :::::::::::                                       ::::::::::
CCDS74 WKDRTSGNVED---------------------------------------EPKTDQDEEH
               70                                               80 

              130       140       150       160       170       180
pF1KE1 CRKVNEYLNNPPMPGALGASGSSGHELSALGGEGGLQSLLGNMSHSQLMQLIGPAGLGGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 CRKVNEYLNNPPMPGALGASGSSGHELSALGGEGGLQSLLGNMSHSQLMQLIGPAGLGGL
              90       100       110       120       130       140 

              190       200       210       220       230       240
pF1KE1 GGLGALTGPGLASLLGSSGPPGSSSSSSSRSQSAAVTPSSTTSSTRATPAPSAPAAASAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 GGLGALTGPGLASLLGSSGPPGSSSSSSSRSQSAAVTPSSTTSSTRATPAPSAPAAASAT
             150       160       170       180       190       200 

              250       260       270       280       290       300
pF1KE1 SPSPAPSSGNGASTAASPTQPIQLSDLQSILATMNVPAGPAGGQQVDLASVLTPEIMAPI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 SPSPAPSSGNGASTAASPTQPIQLSDLQSILATMNVPAGPAGGQQVDLASVLTPEIMAPI
             210       220       230       240       250       260 

              310       320       330       340       350       360
pF1KE1 LANADVQERLLPYLPSGESLPQTADEIQNTLTSPQFQQALGMFSAALASGQLGPLMCQFG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 LANADVQERLLPYLPSGESLPQTADEIQNTLTSPQFQQALGMFSAALASGQLGPLMCQFG
             270       280       290       300       310       320 

              370       380       390       400       
pF1KE1 LPAEAVEAANKGDVEAFAKAMQNNAKPEQKEGDTKDKKDEEEDMSLD
       :::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 LPAEAVEAANKGDVEAFAKAMQNNAKPEQKEGDTKDKKDEEEDMSLD
             330       340       350       360        




407 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Mon Nov  7 01:04:23 2016 done: Mon Nov  7 01:04:24 2016
 Total Scan time:  3.790 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]