FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1411, 199 aa 1>>>pF1KE1411 199 - 199 aa - 199 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.9243+/-0.000741; mu= 10.2721+/- 0.044 mean_var=67.8207+/-13.496, 0's: 0 Z-trim(108.7): 20 B-trim: 0 in 0/50 Lambda= 0.155738 statistics sampled from 10394 (10405) to 10394 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.702), E-opt: 0.2 (0.32), width: 16 Scan time: 2.150 The best scores are: opt bits E(32554) CCDS9048.1 CRADD gene_id:8738|Hs108|chr12 ( 199) 1308 302.3 1.3e-82 CCDS81719.1 CRADD gene_id:8738|Hs108|chr12 ( 130) 636 151.2 2.5e-37 CCDS81720.1 CRADD gene_id:8738|Hs108|chr12 ( 115) 628 149.4 7.7e-37 CCDS81722.1 CRADD gene_id:8738|Hs108|chr12 ( 121) 628 149.4 8.1e-37 >>CCDS9048.1 CRADD gene_id:8738|Hs108|chr12 (199 aa) initn: 1308 init1: 1308 opt: 1308 Z-score: 1596.6 bits: 302.3 E(32554): 1.3e-82 Smith-Waterman score: 1308; 100.0% identity (100.0% similar) in 199 aa overlap (1-199:1-199) 10 20 30 40 50 60 pF1KE1 MEARDKQVLRSLRLELGAEVLVEGLVLQYLYQEGILTENHIQEINAQTTGLRKTMLLLDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 MEARDKQVLRSLRLELGAEVLVEGLVLQYLYQEGILTENHIQEINAQTTGLRKTMLLLDI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LPSRGPKAFDTFLDSLQEFPWVREKLKKAREEAMTDLPAGDRLTGIPSHILNSSPSDRQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 LPSRGPKAFDTFLDSLQEFPWVREKLKKAREEAMTDLPAGDRLTGIPSHILNSSPSDRQI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 NQLAQRLGPEWEPMVLSLGLSQTDIYRCKANHPHNVQSQVVEAFIRWRQRFGKQATFQSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 NQLAQRLGPEWEPMVLSLGLSQTDIYRCKANHPHNVQSQVVEAFIRWRQRFGKQATFQSL 130 140 150 160 170 180 190 pF1KE1 HNGLRAVEVDPSLLLHMLE ::::::::::::::::::: CCDS90 HNGLRAVEVDPSLLLHMLE 190 >>CCDS81719.1 CRADD gene_id:8738|Hs108|chr12 (130 aa) initn: 636 init1: 636 opt: 636 Z-score: 783.7 bits: 151.2 E(32554): 2.5e-37 Smith-Waterman score: 636; 100.0% identity (100.0% similar) in 100 aa overlap (1-100:1-100) 10 20 30 40 50 60 pF1KE1 MEARDKQVLRSLRLELGAEVLVEGLVLQYLYQEGILTENHIQEINAQTTGLRKTMLLLDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 MEARDKQVLRSLRLELGAEVLVEGLVLQYLYQEGILTENHIQEINAQTTGLRKTMLLLDI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LPSRGPKAFDTFLDSLQEFPWVREKLKKAREEAMTDLPAGDRLTGIPSHILNSSPSDRQI :::::::::::::::::::::::::::::::::::::::: CCDS81 LPSRGPKAFDTFLDSLQEFPWVREKLKKAREEAMTDLPAGLEEKGRTGRRMGWGAGEEKG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 NQLAQRLGPEWEPMVLSLGLSQTDIYRCKANHPHNVQSQVVEAFIRWRQRFGKQATFQSL CCDS81 QKCQTVGMRT 130 >>CCDS81720.1 CRADD gene_id:8738|Hs108|chr12 (115 aa) initn: 628 init1: 628 opt: 628 Z-score: 774.9 bits: 149.4 E(32554): 7.7e-37 Smith-Waterman score: 628; 100.0% identity (100.0% similar) in 99 aa overlap (1-99:1-99) 10 20 30 40 50 60 pF1KE1 MEARDKQVLRSLRLELGAEVLVEGLVLQYLYQEGILTENHIQEINAQTTGLRKTMLLLDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 MEARDKQVLRSLRLELGAEVLVEGLVLQYLYQEGILTENHIQEINAQTTGLRKTMLLLDI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LPSRGPKAFDTFLDSLQEFPWVREKLKKAREEAMTDLPAGDRLTGIPSHILNSSPSDRQI ::::::::::::::::::::::::::::::::::::::: CCDS81 LPSRGPKAFDTFLDSLQEFPWVREKLKKAREEAMTDLPAVAIIRLPRELSLPTLL 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 NQLAQRLGPEWEPMVLSLGLSQTDIYRCKANHPHNVQSQVVEAFIRWRQRFGKQATFQSL >>CCDS81722.1 CRADD gene_id:8738|Hs108|chr12 (121 aa) initn: 628 init1: 628 opt: 628 Z-score: 774.5 bits: 149.4 E(32554): 8.1e-37 Smith-Waterman score: 628; 100.0% identity (100.0% similar) in 99 aa overlap (1-99:1-99) 10 20 30 40 50 60 pF1KE1 MEARDKQVLRSLRLELGAEVLVEGLVLQYLYQEGILTENHIQEINAQTTGLRKTMLLLDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 MEARDKQVLRSLRLELGAEVLVEGLVLQYLYQEGILTENHIQEINAQTTGLRKTMLLLDI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LPSRGPKAFDTFLDSLQEFPWVREKLKKAREEAMTDLPAGDRLTGIPSHILNSSPSDRQI ::::::::::::::::::::::::::::::::::::::: CCDS81 LPSRGPKAFDTFLDSLQEFPWVREKLKKAREEAMTDLPAEMRKLRPKDSVTCLASQLTWR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 NQLAQRLGPEWEPMVLSLGLSQTDIYRCKANHPHNVQSQVVEAFIRWRQRFGKQATFQSL CCDS81 F 199 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 01:06:54 2016 done: Mon Nov 7 01:06:54 2016 Total Scan time: 2.150 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]