FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3607, 251 aa 1>>>pF1KE3607 251 - 251 aa - 251 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.6072+/-0.00107; mu= 18.4283+/- 0.065 mean_var=78.9822+/-16.410, 0's: 0 Z-trim(104.4): 186 B-trim: 300 in 1/49 Lambda= 0.144314 statistics sampled from 7691 (7904) to 7691 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.628), E-opt: 0.2 (0.243), width: 16 Scan time: 2.170 The best scores are: opt bits E(32554) CCDS45636.1 RAB34 gene_id:83871|Hs108|chr17 ( 251) 1662 355.7 1.7e-98 CCDS11240.1 RAB34 gene_id:83871|Hs108|chr17 ( 259) 1636 350.3 7.4e-97 CCDS54101.1 RAB34 gene_id:83871|Hs108|chr17 ( 268) 1184 256.2 1.6e-68 CCDS58536.1 RAB34 gene_id:83871|Hs108|chr17 ( 237) 1152 249.5 1.5e-66 CCDS13805.1 RAB36 gene_id:9609|Hs108|chr22 ( 333) 905 198.2 5.7e-51 CCDS1058.1 RAB13 gene_id:5872|Hs108|chr1 ( 203) 405 93.9 9e-20 CCDS41846.1 RAB35 gene_id:11021|Hs108|chr12 ( 201) 393 91.4 5e-19 CCDS76691.1 RAB15 gene_id:376267|Hs108|chr14 ( 212) 374 87.5 8.1e-18 CCDS6827.1 RAB14 gene_id:51552|Hs108|chr9 ( 215) 374 87.5 8.2e-18 CCDS31613.1 RAB1B gene_id:81876|Hs108|chr11 ( 201) 369 86.4 1.6e-17 CCDS8223.1 RAB6A gene_id:5870|Hs108|chr11 ( 208) 366 85.8 2.5e-17 CCDS3082.1 RAB6B gene_id:51560|Hs108|chr3 ( 208) 361 84.8 5.2e-17 CCDS46306.1 RAB1A gene_id:5861|Hs108|chr2 ( 205) 360 84.5 6e-17 CCDS8224.1 RAB6A gene_id:5870|Hs108|chr11 ( 208) 360 84.5 6e-17 CCDS10183.1 RAB8B gene_id:51762|Hs108|chr15 ( 207) 354 83.3 1.4e-16 CCDS1720.1 RAB10 gene_id:10890|Hs108|chr2 ( 200) 341 80.6 9.1e-16 CCDS33850.1 RAB43 gene_id:339122|Hs108|chr3 ( 212) 339 80.2 1.3e-15 CCDS54161.1 RAB37 gene_id:326624|Hs108|chr17 ( 228) 338 80.0 1.5e-15 CCDS44803.1 CRACR2A gene_id:84766|Hs108|chr12 ( 731) 343 81.6 1.6e-15 CCDS12339.1 RAB8A gene_id:4218|Hs108|chr19 ( 207) 337 79.8 1.7e-15 CCDS82198.1 RAB37 gene_id:326624|Hs108|chr17 ( 196) 333 78.9 2.9e-15 CCDS33030.1 RAB4B gene_id:53916|Hs108|chr19 ( 213) 333 78.9 3e-15 CCDS32722.1 RAB37 gene_id:326624|Hs108|chr17 ( 223) 333 79.0 3.1e-15 CCDS4962.1 RAB23 gene_id:51715|Hs108|chr6 ( 237) 332 78.8 3.7e-15 CCDS9768.1 RAB15 gene_id:376267|Hs108|chr14 ( 208) 330 78.3 4.6e-15 CCDS10460.1 RAB26 gene_id:25837|Hs108|chr16 ( 256) 327 77.8 8.1e-15 CCDS53836.1 RAB35 gene_id:11021|Hs108|chr12 ( 152) 323 76.7 1e-14 CCDS8264.1 RAB30 gene_id:27314|Hs108|chr11 ( 203) 322 76.6 1.4e-14 CCDS82514.1 WTH3DI gene_id:150786|Hs108|chr2 ( 254) 323 76.9 1.4e-14 CCDS3747.1 RAB33B gene_id:83452|Hs108|chr4 ( 229) 322 76.7 1.5e-14 CCDS14621.1 RAB33A gene_id:9363|Hs108|chrX ( 237) 322 76.7 1.6e-14 CCDS46408.1 RAB6C gene_id:84084|Hs108|chr2 ( 254) 322 76.7 1.7e-14 CCDS11703.1 RAB37 gene_id:326624|Hs108|chr17 ( 216) 318 75.8 2.7e-14 CCDS6662.1 RASEF gene_id:158158|Hs108|chr9 ( 740) 323 77.5 2.9e-14 CCDS76806.1 RAB26 gene_id:25837|Hs108|chr16 ( 190) 316 75.3 3.3e-14 CCDS56275.1 RAB43 gene_id:339122|Hs108|chr3 ( 155) 314 74.8 3.8e-14 CCDS12201.1 RAB11B gene_id:9230|Hs108|chr19 ( 218) 314 75.0 4.8e-14 CCDS10212.1 RAB11A gene_id:8766|Hs108|chr15 ( 216) 312 74.6 6.3e-14 CCDS31050.1 RAB4A gene_id:5867|Hs108|chr1 ( 218) 312 74.6 6.3e-14 CCDS42410.1 RAB12 gene_id:201475|Hs108|chr18 ( 244) 312 74.6 6.8e-14 CCDS6175.1 RAB2A gene_id:5862|Hs108|chr8 ( 212) 310 74.1 8.3e-14 CCDS34762.2 RAB19 gene_id:401409|Hs108|chr7 ( 217) 310 74.2 8.4e-14 CCDS33497.1 RAB22A gene_id:57403|Hs108|chr20 ( 194) 308 73.7 1e-13 CCDS1459.1 RAB29 gene_id:8934|Hs108|chr1 ( 203) 306 73.3 1.4e-13 CCDS8338.1 RAB39A gene_id:54734|Hs108|chr11 ( 217) 306 73.3 1.5e-13 CCDS14156.1 RAB9A gene_id:9367|Hs108|chrX ( 201) 303 72.7 2.2e-13 CCDS9570.1 RAB2B gene_id:84932|Hs108|chr14 ( 216) 301 72.3 3.1e-13 CCDS58155.1 RAB6A gene_id:5870|Hs108|chr11 ( 175) 298 71.6 4.1e-13 CCDS58373.1 RAB11A gene_id:8766|Hs108|chr15 ( 155) 297 71.3 4.4e-13 CCDS8900.1 RAB5B gene_id:5869|Hs108|chr12 ( 215) 297 71.4 5.5e-13 >>CCDS45636.1 RAB34 gene_id:83871|Hs108|chr17 (251 aa) initn: 1662 init1: 1662 opt: 1662 Z-score: 1881.8 bits: 355.7 E(32554): 1.7e-98 Smith-Waterman score: 1662; 100.0% identity (100.0% similar) in 251 aa overlap (1-251:1-251) 10 20 30 40 50 60 pF1KE3 MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 LSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 LSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAST 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 YYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLTPAQYALMEKDALQVAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 YYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLTPAQYALMEKDALQVAQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 EMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRINSDDSNLYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 EMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRINSDDSNLYL 190 200 210 220 230 240 250 pF1KE3 TASKKKPTCCP ::::::::::: CCDS45 TASKKKPTCCP 250 >>CCDS11240.1 RAB34 gene_id:83871|Hs108|chr17 (259 aa) initn: 1650 init1: 1099 opt: 1636 Z-score: 1852.3 bits: 350.3 E(32554): 7.4e-97 Smith-Waterman score: 1636; 96.9% identity (96.9% similar) in 259 aa overlap (1-251:1-259) 10 20 30 40 50 60 pF1KE3 MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 LSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 LSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAST 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 YYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFL--------TPAQYALME ::::::::::::::::::::::::::::::::::::::::::: ::::::::: CCDS11 YYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALME 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE3 KDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 KDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRIN 190 200 210 220 230 240 240 250 pF1KE3 SDDSNLYLTASKKKPTCCP ::::::::::::::::::: CCDS11 SDDSNLYLTASKKKPTCCP 250 >>CCDS54101.1 RAB34 gene_id:83871|Hs108|chr17 (268 aa) initn: 1196 init1: 752 opt: 1184 Z-score: 1343.6 bits: 256.2 E(32554): 1.6e-68 Smith-Waterman score: 1184; 95.3% identity (95.3% similar) in 192 aa overlap (1-183:58-249) 10 20 30 pF1KE3 MNILAPVRRDRVLAELPQCLRKEAALHGHK :::::::::::::::::::::::::::::: CCDS54 AGSWHRQMLRSSLRFPITNSAGAPCKAAGRMNILAPVRRDRVLAELPQCLRKEAALHGHK 30 40 50 60 70 80 40 50 60 70 80 pF1KE3 DFHPRVTCACQEHRTGTVG-FKISKVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF ::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::: CCDS54 DFHPRVTCACQEHRTGTVGRFKISKVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF 90 100 110 120 130 140 90 100 110 120 130 140 pF1KE3 EMERFEVLGIPFSLQLWDTAGQERFKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 EMERFEVLGIPFSLQLWDTAGQERFKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLAD 150 160 170 180 190 200 150 160 170 180 190 200 pF1KE3 ALKENDPSSVLLFL--------TPAQYALMEKDALQVAQEMKAEYWAVSSLTGENVREFF :::::::::::::: :::::::::::::::::::: CCDS54 ALKENDPSSVLLFLVGSKKDLSTPAQYALMEKDALQVAQEMKTVQRLPSPRALCHPHSSR 210 220 230 240 250 260 210 220 230 240 250 pF1KE3 FRVAALTFEANVLAELEKSGARRIGDVVRINSDDSNLYLTASKKKPTCCP CCDS54 A >>CCDS58536.1 RAB34 gene_id:83871|Hs108|chr17 (237 aa) initn: 1507 init1: 615 opt: 1152 Z-score: 1308.2 bits: 249.5 E(32554): 1.5e-66 Smith-Waterman score: 1445; 88.4% identity (88.4% similar) in 259 aa overlap (1-251:1-237) 10 20 30 40 50 60 pF1KE3 MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGD :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPRVTCACQEHRTGTVGF---------- 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 LSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAST :::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 ------------CKDTFDKNYKATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIAST 60 70 80 90 130 140 150 160 170 pF1KE3 YYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFL--------TPAQYALME ::::::::::::::::::::::::::::::::::::::::::: ::::::::: CCDS58 YYRGAQAIIIVFNLNDVASLEHTKQWLADALKENDPSSVLLFLVGSKKDLSTPAQYALME 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE3 KDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 KDALQVAQEMKAEYWAVSSLTGENVREFFFRVAALTFEANVLAELEKSGARRIGDVVRIN 160 170 180 190 200 210 240 250 pF1KE3 SDDSNLYLTASKKKPTCCP ::::::::::::::::::: CCDS58 SDDSNLYLTASKKKPTCCP 220 230 >>CCDS13805.1 RAB36 gene_id:9609|Hs108|chr22 (333 aa) initn: 953 init1: 726 opt: 905 Z-score: 1028.5 bits: 198.2 E(32554): 5.7e-51 Smith-Waterman score: 927; 54.6% identity (80.0% similar) in 260 aa overlap (6-250:77-333) 10 20 30 pF1KE3 MNILAPVRRDRVLAELPQCLRKEAALHGHKDFHPR :: ::::.: .:. :: :. .. :: . CCDS13 SGGPGRAEPQLSQPSLDCGRMRSSLTPLGPPVSRDRVIASFPKWYTPEACLQLREHFHGQ 50 60 70 80 90 100 40 50 60 70 80 90 pF1KE3 VTCACQEHRTGTVGFKISKVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFE :. :::.. :::::.:.:::.::::: :::: ::.::::..::..::::::::::.:::: CCDS13 VSAACQRRNTGTVGLKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGVDFEIERFE 110 120 130 140 150 160 100 110 120 130 140 150 pF1KE3 VLGIPFSLQLWDTAGQERFKCIASTYYRGAQAIIIVFNLNDVASLEHTKQWLADALKEND . :::.:::.:::::::.::::::.::::::.:: .:.:.:: .::::.::: :::.::. CCDS13 IAGIPYSLQIWDTAGQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTRQWLEDALRENE 170 180 190 200 210 220 160 170 180 190 200 pF1KE3 PSSVLLFLTPAQYALM--------EKDALQVAQEMKAEYWAVSSLTGENVREFFFRVAAL .: ..::. .. :. : ::...:.::.::::.::. :::::. :: ::::: CCDS13 AGSCFIFLVGTKKDLLSGAACEQAEADAVHLAREMQAEYWSVSAKTGENVKAFFSRVAAL 230 240 250 260 270 280 210 220 230 240 250 pF1KE3 TFEANVLAELEKSGARRI----GDVVRINSDDSNLYLTASKKKPT---CCP .:: .:: .::.... :. ::....... . : .:.:. :: CCDS13 AFEQSVLQDLERQSSARLQVGNGDLIQMEGSPPE---TQESKRPSSLGCC 290 300 310 320 330 >>CCDS1058.1 RAB13 gene_id:5872|Hs108|chr1 (203 aa) initn: 359 init1: 333 opt: 405 Z-score: 468.5 bits: 93.9 E(32554): 9e-20 Smith-Waterman score: 405; 36.5% identity (69.0% similar) in 203 aa overlap (54-250:10-200) 30 40 50 60 70 80 pF1KE3 AALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGDLSVGKTCLINRFCKDTFDKNYKA :....:: .::::::: :: .:.:...: . CCDS10 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYIS 10 20 30 90 100 110 120 130 140 pF1KE3 TIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIASTYYRGAQAIIIVFNLNDVASLEHT :::.::... .. : ..::.:::::::::: :...:::::..::.:....: :.:. CCDS10 TIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENI 40 50 60 70 80 90 150 160 170 180 190 pF1KE3 KQWLADALKENDPSSVLLFLT------PAQYALMEKDALQVAQEMKAEYWAVSSLTGENV ..:. ..::: ..: .: :. .....: ..:.: ... .:. .. :: CCDS10 QNWMK-SIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNV 100 110 120 130 140 150 200 210 220 230 240 250 pF1KE3 REFFFRVAALTFEANVLAELEKSGARRIGDVVRINSDDSNLYLTASKKKPTCCP : : .: ..: :::.:: :. . : : . : .::. . : CCDS10 DEAFSSLAR-----DILL---KSGGRRSGNGNKPPSTDLK---TCDKKNTNKCSLG 160 170 180 190 200 >>CCDS41846.1 RAB35 gene_id:11021|Hs108|chr12 (201 aa) initn: 369 init1: 320 opt: 393 Z-score: 455.0 bits: 91.4 E(32554): 5e-19 Smith-Waterman score: 393; 33.8% identity (68.2% similar) in 201 aa overlap (54-250:10-201) 30 40 50 60 70 80 pF1KE3 AALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGDLSVGKTCLINRFCKDTFDKNYKA :....:: .:::. :. :: .::. .: . CCDS41 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYIT 10 20 30 90 100 110 120 130 140 pF1KE3 TIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIASTYYRGAQAIIIVFNLNDVASLEHT ::::::... :. : .::.:::::::::. :.::::::....:.:...... :. .. CCDS41 TIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNV 40 50 60 70 80 90 150 160 170 180 190 pF1KE3 KQWLADALKENDPSSVLLFLT----PAQYALMEKDALQVAQEMKAEYWAVSSLTGENVRE :.:: . .. : .: . : . .. .:: . : .: . . .:. . ::.: CCDS41 KRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEE 100 110 120 130 140 150 200 210 220 230 240 250 pF1KE3 FFFRVAALTFEANVLAELEKSGARRIGDVVRINSDDSNLYLTASKKKPTCCP .: .. :...:. .: :. .. .:::..... ::.: :: CCDS41 MFNCITELVLRAKK-DNLAKQQQQQQNDVVKLTKN--------SKRKKRCC 160 170 180 190 200 >>CCDS76691.1 RAB15 gene_id:376267|Hs108|chr14 (212 aa) initn: 321 init1: 321 opt: 374 Z-score: 433.4 bits: 87.5 E(32554): 8.1e-18 Smith-Waterman score: 374; 36.3% identity (69.0% similar) in 171 aa overlap (54-218:10-178) 30 40 50 60 70 80 pF1KE3 AALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGDLSVGKTCLINRFCKDTFDKNYKA .....:: .::::::. :: . : ... . CCDS76 MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHIS 10 20 30 90 100 110 120 130 140 pF1KE3 TIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIASTYYRGAQAIIIVFNLNDVASLEHT ::::::.:. .:: :: .:.::::::::.. :.. ::: ::.:..:..... : .: CCDS76 TIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHI 40 50 60 70 80 90 150 160 170 180 190 pF1KE3 KQWLADALKENDPSSVLLFLTPAQYALMEKDAL------QVAQEMKAEYWAVSSLTGENV .:..: . : : .: .: . .: . :.:.:. ... .:. :. :. CCDS76 MKWVSD-VDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNI 100 110 120 130 140 150 200 210 220 230 240 250 pF1KE3 REFFFRVAALTFEANVLAELEKSGARRIGDVVRINSDDSNLYLTASKKKPTCCP .: : :.. :...:. ::: CCDS76 KESFTRLTELVLQAHR-KELEGLRMRASNELALAELEEEEGKPEGPANSSKTCWC 160 170 180 190 200 210 >>CCDS6827.1 RAB14 gene_id:51552|Hs108|chr9 (215 aa) initn: 355 init1: 325 opt: 374 Z-score: 433.3 bits: 87.5 E(32554): 8.2e-18 Smith-Waterman score: 374; 35.4% identity (69.5% similar) in 164 aa overlap (52-210:11-174) 30 40 50 60 70 80 pF1KE3 KEAALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGDLSVGKTCLINRFCKDTFDKNY : : :..::..:::.::...: . : . CCDS68 MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADC 10 20 30 40 90 100 110 120 130 140 pF1KE3 KATIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIASTYYRGAQAIIIVFNLNDVASLE ::::.: . .:: : ..::.:::::::::. .. .::::: . ..:.... .. . CCDS68 PHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYN 50 60 70 80 90 100 150 160 170 180 190 pF1KE3 HTKQWLADALKENDPSSVLLFL-----TPAQYALMEKDALQVAQEMKAEYWAVSSLTGEN : ..::.:: . ..:..:.... :: . ..: : :.: . .:. :::: CCDS68 HLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGEN 110 120 130 140 150 160 200 210 220 230 240 250 pF1KE3 VREFFFRVAALTFEANVLAELEKSGARRIGDVVRINSDDSNLYLTASKKKPTCCP :.. :...: .. CCDS68 VEDAFLEAAKKIYQNIQDGSLDLNAAESGVQHKPSAPQGGRLTSEPQPQREGCGC 170 180 190 200 210 >>CCDS31613.1 RAB1B gene_id:81876|Hs108|chr11 (201 aa) initn: 337 init1: 337 opt: 369 Z-score: 428.0 bits: 86.4 E(32554): 1.6e-17 Smith-Waterman score: 369; 34.0% identity (63.6% similar) in 206 aa overlap (54-250:10-201) 30 40 50 60 70 80 pF1KE3 AALHGHKDFHPRVTCACQEHRTGTVGFKISKVIVVGDLSVGKTCLINRFCKDTFDKNYKA :....:: .:::.::. :: ::. ..: . CCDS31 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYIS 10 20 30 90 100 110 120 130 140 pF1KE3 TIGVDFEMERFEVLGIPFSLQLWDTAGQERFKCIASTYYRGAQAIIIVFNLNDVASLEHT ::::::... .:. : ..::.:::::::::. :.:.:::::..::.:....: : .. CCDS31 TIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANV 40 50 60 70 80 90 150 160 170 180 190 pF1KE3 KQWLADALKENDPSSVLLFLTPAQYALMEKD------ALQVAQEMKAEYWAVSSLTGENV :::: . . . .: .:. . : : : . :. . . .:. .. :: CCDS31 KQWLQE-IDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNV 100 110 120 130 140 150 200 210 220 230 240 250 pF1KE3 REFFFRVAALTFEANVLAELEKSGARRIGDVVRINSDDSNLYLTASKKKPT---CCP .. :. .:: :..: :.: . ... :: . .. ::. :: CCDS31 EQAFMTMAA---------EIKK----RMGPGAASGGERPNLKIDSTPVKPAGGGCC 160 170 180 190 200 251 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 01:08:45 2016 done: Mon Nov 7 01:08:46 2016 Total Scan time: 2.170 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]