FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3921, 399 aa 1>>>pF1KE3921 399 - 399 aa - 399 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3897+/-0.000425; mu= 12.7953+/- 0.027 mean_var=122.2048+/-24.651, 0's: 0 Z-trim(114.7): 55 B-trim: 695 in 1/51 Lambda= 0.116019 statistics sampled from 24715 (24757) to 24715 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.633), E-opt: 0.2 (0.29), width: 16 Scan time: 7.640 The best scores are: opt bits E(85289) NP_071440 (OMIM: 608267) ras-related GTP-binding p ( 399) 2631 451.7 1.4e-126 NP_067067 (OMIM: 608268) ras-related GTP-binding p ( 400) 1957 338.9 1.3e-92 XP_011534324 (OMIM: 608268) PREDICTED: ras-related ( 386) 1953 338.2 2e-92 NP_001258780 (OMIM: 608267) ras-related GTP-bindin ( 365) 1888 327.3 3.6e-89 XP_005248812 (OMIM: 608268) PREDICTED: ras-related ( 303) 1513 264.5 2.5e-70 NP_006055 (OMIM: 300725) ras-related GTP-binding p ( 346) 282 58.5 2.9e-08 XP_016884706 (OMIM: 300725) PREDICTED: ras-related ( 308) 278 57.8 4.2e-08 NP_006561 (OMIM: 612194) ras-related GTP-binding p ( 313) 275 57.3 6e-08 XP_005262030 (OMIM: 300725) PREDICTED: ras-related ( 336) 226 49.1 1.9e-05 NP_057740 (OMIM: 300725) ras-related GTP-binding p ( 374) 226 49.2 2e-05 XP_016884707 (OMIM: 300725) PREDICTED: ras-related ( 286) 224 48.7 2.1e-05 >>NP_071440 (OMIM: 608267) ras-related GTP-binding prote (399 aa) initn: 2631 init1: 2631 opt: 2631 Z-score: 2393.5 bits: 451.7 E(85289): 1.4e-126 Smith-Waterman score: 2631; 100.0% identity (100.0% similar) in 399 aa overlap (1-399:1-399) 10 20 30 40 50 60 pF1KE3 MSLQYGAEETPLAGSYGAADSFPKDFGYGVEEEEEEAAAAGGGVGAGAGGGCGPGGADSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_071 MSLQYGAEETPLAGSYGAADSFPKDFGYGVEEEEEEAAAAGGGVGAGAGGGCGPGGADSS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFPGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_071 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFPGQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 MDFFDPTFDYEMIFRGTGALIYVIDAQDDYMEALTRLHITVSKAYKVNPDMNFEVFIHKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_071 MDFFDPTFDYEMIFRGTGALIYVIDAQDDYMEALTRLHITVSKAYKVNPDMNFEVFIHKV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 DGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYDHSIFEAFSKVVQKLIPQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_071 DGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYDHSIFEAFSKVVQKLIPQL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 PTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDVSCIYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_071 PTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDVSCIYG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 LKEDGSGSAYDKESMAIIKLNNTTVLYLKEVTKFLALVCILREESFERKGLIDYNFHCFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_071 LKEDGSGSAYDKESMAIIKLNNTTVLYLKEVTKFLALVCILREESFERKGLIDYNFHCFR 310 320 330 340 350 360 370 380 390 pF1KE3 KAIHEVFEVGVTSHRSCGHQTSASSLKALTHNGTPRNAI ::::::::::::::::::::::::::::::::::::::: NP_071 KAIHEVFEVGVTSHRSCGHQTSASSLKALTHNGTPRNAI 370 380 390 >>NP_067067 (OMIM: 608268) ras-related GTP-binding prote (400 aa) initn: 1980 init1: 1953 opt: 1957 Z-score: 1783.7 bits: 338.9 E(85289): 1.3e-92 Smith-Waterman score: 1966; 79.9% identity (87.1% similar) in 388 aa overlap (23-396:10-397) 10 20 30 40 50 pF1KE3 MSLQYGAEETPLAGSYGAADSFPKDFGYGVEEEEEEA----AAAGGG---VGAGAGGGCG :.: . :::::. : : : : .: NP_067 MSQVLGKPQPQDEDDAEEEEEEDELVGLADYGDGPDSSDADPDSGTE 10 20 30 40 60 70 80 90 100 pF1KE3 PGGADSS-------KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISN : : : ::::::::::::::::::::::::::::::::::::::: ..:.:: NP_067 EGVLDFSDPFSTEVKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKICREDVSN 50 60 70 80 90 100 110 120 130 140 150 160 pF1KE3 SSFVNFQIWDFPGQMDFFDPTFDYEMIFRGTGALIYVIDAQDDYMEALTRLHITVSKAYK ::::::::::::::.::::::::::::::::::::.:::.::::::::.:::.::..::: NP_067 SSFVNFQIWDFPGQIDFFDPTFDYEMIFRGTGALIFVIDSQDDYMEALARLHLTVTRAYK 110 120 130 140 150 160 170 180 190 200 210 220 pF1KE3 VNPDMNFEVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYDHSIF :: :.:::::::::::::::::::::::::::::::::::::::.::::::::::::::: NP_067 VNTDINFEVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEKIHLSFYLTSIYDHSIF 170 180 190 200 210 220 230 240 250 260 270 280 pF1KE3 EAFSKVVQKLIPQLPTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCC ::::::::::::::::::::::::::::::::::::::::::::::::.:::::.::::: NP_067 EAFSKVVQKLIPQLPTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSTPVDMQTYELCC 230 240 250 260 270 280 290 300 310 320 330 340 pF1KE3 DMIDVVIDVSCIYGLKEDGSGSAYDKESMAIIKLNNTTVLYLKEVTKFLALVCILREESF ::::::::.::::::::::.:. ::::: ::::::::::::::::::::::::..::::: NP_067 DMIDVVIDISCIYGLKEDGAGTPYDKESTAIIKLNNTTVLYLKEVTKFLALVCFVREESF 290 300 310 320 330 340 350 360 370 380 390 pF1KE3 ERKGLIDYNFHCFRKAIHEVFEVGVTSHRSCGHQTSASSLKALTHNGTPRNAI ::::::::::::::::::::::: . .: :. .. : : ::::: NP_067 ERKGLIDYNFHCFRKAIHEVFEVRMKVVKSRKVQNRLQKKKRATPNGTPRVLL 350 360 370 380 390 400 >>XP_011534324 (OMIM: 608268) PREDICTED: ras-related GTP (386 aa) initn: 1953 init1: 1953 opt: 1953 Z-score: 1780.3 bits: 338.2 E(85289): 2e-92 Smith-Waterman score: 1953; 87.8% identity (94.9% similar) in 336 aa overlap (61-396:48-383) 40 50 60 70 80 90 pF1KE3 EEEEEEAAAAGGGVGAGAGGGCGPGGADSSKPRILLMGLRRSGKSSIQKVVFHKMSPNET :::::::::::::::::::::::::::::: XP_011 RQLRVSVSPRVAAGGAHPVLDFSDPFSTEVKPRILLMGLRRSGKSSIQKVVFHKMSPNET 20 30 40 50 60 70 100 110 120 130 140 150 pF1KE3 LFLESTNKIYKDDISNSSFVNFQIWDFPGQMDFFDPTFDYEMIFRGTGALIYVIDAQDDY ::::::::: ..:.::::::::::::::::.::::::::::::::::::::.:::.:::: XP_011 LFLESTNKICREDVSNSSFVNFQIWDFPGQIDFFDPTFDYEMIFRGTGALIFVIDSQDDY 80 90 100 110 120 130 160 170 180 190 200 210 pF1KE3 MEALTRLHITVSKAYKVNPDMNFEVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEK ::::.:::.::..::::: :.::::::::::::::::::::::::::::::::::::::: XP_011 MEALARLHLTVTRAYKVNTDINFEVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEK 140 150 160 170 180 190 220 230 240 250 260 270 pF1KE3 LHLSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNIFISNSGIEKAFLFDVVSKIYI .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 IHLSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNIFISNSGIEKAFLFDVVSKIYI 200 210 220 230 240 250 280 290 300 310 320 330 pF1KE3 ATDSSPVDMQSYELCCDMIDVVIDVSCIYGLKEDGSGSAYDKESMAIIKLNNTTVLYLKE ::::.:::::.:::::::::::::.::::::::::.:. ::::: ::::::::::::::: XP_011 ATDSTPVDMQTYELCCDMIDVVIDISCIYGLKEDGAGTPYDKESTAIIKLNNTTVLYLKE 260 270 280 290 300 310 340 350 360 370 380 390 pF1KE3 VTKFLALVCILREESFERKGLIDYNFHCFRKAIHEVFEVGVTSHRSCGHQTSASSLKALT :::::::::..:::::::::::::::::::::::::::: . .: :. .. : : XP_011 VTKFLALVCFVREESFERKGLIDYNFHCFRKAIHEVFEVRMKVVKSRKVQNRLQKKKRAT 320 330 340 350 360 370 pF1KE3 HNGTPRNAI ::::: XP_011 PNGTPRVLL 380 >>NP_001258780 (OMIM: 608267) ras-related GTP-binding pr (365 aa) initn: 2148 init1: 1888 opt: 1888 Z-score: 1721.8 bits: 327.3 E(85289): 3.6e-89 Smith-Waterman score: 2335; 91.5% identity (91.5% similar) in 399 aa overlap (1-399:1-365) 10 20 30 40 50 60 pF1KE3 MSLQYGAEETPLAGSYGAADSFPKDFGYGVEEEEEEAAAAGGGVGAGAGGGCGPGGADSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MSLQYGAEETPLAGSYGAADSFPKDFGYGVEEEEEEAAAAGGGVGAGAGGGCGPGGADSS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFPGQ ::::::::::::::::::: ::::::: NP_001 KPRILLMGLRRSGKSSIQK----------------------------------IWDFPGQ 70 80 130 140 150 160 170 180 pF1KE3 MDFFDPTFDYEMIFRGTGALIYVIDAQDDYMEALTRLHITVSKAYKVNPDMNFEVFIHKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MDFFDPTFDYEMIFRGTGALIYVIDAQDDYMEALTRLHITVSKAYKVNPDMNFEVFIHKV 90 100 110 120 130 140 190 200 210 220 230 240 pF1KE3 DGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYDHSIFEAFSKVVQKLIPQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYDHSIFEAFSKVVQKLIPQL 150 160 170 180 190 200 250 260 270 280 290 300 pF1KE3 PTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDVSCIYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDVSCIYG 210 220 230 240 250 260 310 320 330 340 350 360 pF1KE3 LKEDGSGSAYDKESMAIIKLNNTTVLYLKEVTKFLALVCILREESFERKGLIDYNFHCFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LKEDGSGSAYDKESMAIIKLNNTTVLYLKEVTKFLALVCILREESFERKGLIDYNFHCFR 270 280 290 300 310 320 370 380 390 pF1KE3 KAIHEVFEVGVTSHRSCGHQTSASSLKALTHNGTPRNAI ::::::::::::::::::::::::::::::::::::::: NP_001 KAIHEVFEVGVTSHRSCGHQTSASSLKALTHNGTPRNAI 330 340 350 360 >>XP_005248812 (OMIM: 608268) PREDICTED: ras-related GTP (303 aa) initn: 1536 init1: 1509 opt: 1513 Z-score: 1383.7 bits: 264.5 E(85289): 2.5e-70 Smith-Waterman score: 1522; 81.5% identity (88.0% similar) in 292 aa overlap (23-300:10-301) 10 20 30 40 50 pF1KE3 MSLQYGAEETPLAGSYGAADSFPKDFGYGVEEEEEEA----AAAGGG---VGAGAGGGCG :.: . :::::. : : : : .: XP_005 MSQVLGKPQPQDEDDAEEEEEEDELVGLADYGDGPDSSDADPDSGTE 10 20 30 40 60 70 80 90 100 pF1KE3 PGGADSS-------KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISN : : : ::::::::::::::::::::::::::::::::::::::: ..:.:: XP_005 EGVLDFSDPFSTEVKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKICREDVSN 50 60 70 80 90 100 110 120 130 140 150 160 pF1KE3 SSFVNFQIWDFPGQMDFFDPTFDYEMIFRGTGALIYVIDAQDDYMEALTRLHITVSKAYK ::::::::::::::.::::::::::::::::::::.:::.::::::::.:::.::..::: XP_005 SSFVNFQIWDFPGQIDFFDPTFDYEMIFRGTGALIFVIDSQDDYMEALARLHLTVTRAYK 110 120 130 140 150 160 170 180 190 200 210 220 pF1KE3 VNPDMNFEVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYDHSIF :: :.:::::::::::::::::::::::::::::::::::::::.::::::::::::::: XP_005 VNTDINFEVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEKIHLSFYLTSIYDHSIF 170 180 190 200 210 220 230 240 250 260 270 280 pF1KE3 EAFSKVVQKLIPQLPTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCC ::::::::::::::::::::::::::::::::::::::::::::::::.:::::.::::: XP_005 EAFSKVVQKLIPQLPTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSTPVDMQTYELCC 230 240 250 260 270 280 290 300 310 320 330 340 pF1KE3 DMIDVVIDVSCIYGLKEDGSGSAYDKESMAIIKLNNTTVLYLKEVTKFLALVCILREESF ::::::::.::::: XP_005 DMIDVVIDISCIYGAN 290 300 >>NP_006055 (OMIM: 300725) ras-related GTP-binding prote (346 aa) initn: 273 init1: 105 opt: 282 Z-score: 269.4 bits: 58.5 E(85289): 2.9e-08 Smith-Waterman score: 282; 28.3% identity (60.9% similar) in 233 aa overlap (43-271:24-248) 20 30 40 50 60 70 pF1KE3 AGSYGAADSFPKDFGYGVEEEEEEAAAAGGGVGAGAGGGCGPGGADSSKPRILLMGLRRS : :. : :. : : ..:::: : NP_006 MEESDSEKTTEKENLGPRMDPPLGEPEGSLGWVLPNTA--MKKKVLLMGKSGS 10 20 30 40 50 80 90 100 110 120 130 pF1KE3 GKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFPGQMDFFDPTF--DY ::.:.....: .. .: : .: . .. . . . ...:: :: :.. : . NP_006 GKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQDTFMENYFTSQR 60 70 80 90 100 110 140 150 160 170 180 pF1KE3 EMIFRGTGALIYVIDAQDDYMEALTRLHITVSKAYKVN-PDMNFEVFIHKVDGLSDDHKI . :::.. .::::.:... .: . . . .: : :: .. ..::.: ...: NP_006 DNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPDAKIFCLVHKMDLVQED--- 120 130 140 150 160 190 200 210 220 230 240 pF1KE3 ETQRD-IHQRANDDLADAGLEKLHLSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLN ::: : .. ..:: . . :. : . :::.:.....:.:..: .:::.. :: : NP_006 --QRDLIFKEREEDLRRLS-RPLECSCFRTSIWDETLYKAWSSIVYQLIPNVQQLEMNLR 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE3 IFISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDVSCIYGLKEDGSGS : ....::. .. . :. NP_006 NFAEIIEADEVLLFERATFLVISHYQCKEQRDAHRFEKISNIIKQFKLSCSKLAASFQSM 230 240 250 260 270 280 >>XP_016884706 (OMIM: 300725) PREDICTED: ras-related GTP (308 aa) initn: 273 init1: 105 opt: 278 Z-score: 266.4 bits: 57.8 E(85289): 4.2e-08 Smith-Waterman score: 278; 28.4% identity (62.8% similar) in 215 aa overlap (61-271:2-210) 40 50 60 70 80 90 pF1KE3 EEEEEEAAAAGGGVGAGAGGGCGPGGADSSKPRILLMGLRRSGKSSIQKVVFHKMSPNET : ..:::: :::.:.....: .. .: XP_016 MKKKVLLMGKSGSGKTSMRSIIFANYIARDT 10 20 30 100 110 120 130 140 pF1KE3 LFLESTNKIYKDDISNSSFVNFQIWDFPGQMDFFDPTF--DYEMIFRGTGALIYVIDAQD : .: . .. . . . ...:: :: :.. : . . :::.. .::::.:... XP_016 RRLGATIDVEHSHVRFLGNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVES 40 50 60 70 80 90 150 160 170 180 190 200 pF1KE3 DYMEALTRLHITVSKAYKVN-PDMNFEVFIHKVDGLSDDHKIETQRD-IHQRANDDLADA .: . . . .: : :: .. ..::.: ...: ::: : .. ..:: XP_016 RELEKDMHYYQSCLEAILQNSPDAKIFCLVHKMDLVQED-----QRDLIFKEREEDLRRL 100 110 120 130 140 210 220 230 240 250 260 pF1KE3 GLEKLHLSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNIFISNSGIEKAFLFDVVS . . :. : . :::.:.....:.:..: .:::.. :: : : ....::. .. XP_016 S-RPLECSCFRTSIWDETLYKAWSSIVYQLIPNVQQLEMNLRNFAEIIEADEVLLFERAT 150 160 170 180 190 200 270 280 290 300 310 320 pF1KE3 KIYIATDSSPVDMQSYELCCDMIDVVIDVSCIYGLKEDGSGSAYDKESMAIIKLNNTTVL . :. XP_016 FLVISHYQCKEQRDAHRFEKISNIIKQFKLSCSKLAASFQSMEVRNSNFAAFIDIFTSNT 210 220 230 240 250 260 >>NP_006561 (OMIM: 612194) ras-related GTP-binding prote (313 aa) initn: 270 init1: 102 opt: 275 Z-score: 263.6 bits: 57.3 E(85289): 6e-08 Smith-Waterman score: 275; 27.9% identity (63.3% similar) in 215 aa overlap (61-271:7-215) 40 50 60 70 80 90 pF1KE3 EEEEEEAAAAGGGVGAGAGGGCGPGGADSSKPRILLMGLRRSGKSSIQKVVFHKMSPNET : ..:::: :::.:.....: .. .: NP_006 MPNTAMKKKVLLMGKSGSGKTSMRSIIFANYIARDT 10 20 30 100 110 120 130 140 pF1KE3 LFLESTNKIYKDDISNSSFVNFQIWDFPGQMDFFDPTF--DYEMIFRGTGALIYVIDAQD : .: . .. . . . ...:: :: :.. : . . :::.. .::::.:... NP_006 RRLGATIDVEHSHVRFLGNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVES 40 50 60 70 80 90 150 160 170 180 190 200 pF1KE3 DYMEALTRLHITVSKAYKVN-PDMNFEVFIHKVDGLSDDHKIETQRD-IHQRANDDLADA .: . . . .: : :: .. ..::.: ...: ::: : .. ..:: NP_006 RELEKDMHYYQSCLEAILQNSPDAKIFCLVHKMDLVQED-----QRDLIFKEREEDLRRL 100 110 120 130 140 150 210 220 230 240 250 260 pF1KE3 GLEKLHLSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNIFISNSGIEKAFLFDVVS . . :. . . :::.:.....:.:..: .:::.. :: : : . ....::. .. NP_006 S-RPLECACFRTSIWDETLYKAWSSIVYQLIPNVQQLEMNLRNFAQIIEADEVLLFERAT 160 170 180 190 200 210 270 280 290 300 310 320 pF1KE3 KIYIATDSSPVDMQSYELCCDMIDVVIDVSCIYGLKEDGSGSAYDKESMAIIKLNNTTVL . :. NP_006 FLVISHYQCKEQRDVHRFEKISNIIKQFKLSCSKLAASFQSMEVRNSNFAAFIDIFTSNT 220 230 240 250 260 270 >>XP_005262030 (OMIM: 300725) PREDICTED: ras-related GTP (336 aa) initn: 258 init1: 105 opt: 226 Z-score: 218.9 bits: 49.1 E(85289): 1.9e-05 Smith-Waterman score: 243; 27.6% identity (58.4% similar) in 243 aa overlap (61-271:2-238) 40 50 60 70 80 90 pF1KE3 EEEEEEAAAAGGGVGAGAGGGCGPGGADSSKPRILLMGLRRSGKSSIQKVVFHKMSPNET : ..:::: :::.:.....: .. .: XP_005 MKKKVLLMGKSGSGKTSMRSIIFANYIARDT 10 20 30 100 110 120 pF1KE3 LFLEST--NKIYK-------------DDISNS-------SFVNF------QIWDFPGQMD : .: ..:.. :...:. : : : ..:: :: XP_005 RRLGATILDRIHSLQINSSLSTYSLVDSVGNTKTFDVEHSHVRFLGNLVLNLWDCGGQDT 40 50 60 70 80 90 130 140 150 160 170 pF1KE3 FFDPTF--DYEMIFRGTGALIYVIDAQDDYMEALTRLHITVSKAYKVN-PDMNFEVFIHK :.. : . . :::.. .::::.:... .: . . . .: : :: .. ..:: XP_005 FMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPDAKIFCLVHK 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE3 VDGLSDDHKIETQRD-IHQRANDDLADAGLEKLHLSFYLTSIYDHSIFEAFSKVVQKLIP .: ...: ::: : .. ..:: . . :. : . :::.:.....:.:..: .::: XP_005 MDLVQED-----QRDLIFKEREEDLRRLS-RPLECSCFRTSIWDETLYKAWSSIVYQLIP 160 170 180 190 200 240 250 260 270 280 290 pF1KE3 QLPTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDVSCI .. :: : : ....::. .. . :. XP_005 NVQQLEMNLRNFAEIIEADEVLLFERATFLVISHYQCKEQRDAHRFEKISNIIKQFKLSC 210 220 230 240 250 260 300 310 320 330 340 350 pF1KE3 YGLKEDGSGSAYDKESMAIIKLNNTTVLYLKEVTKFLALVCILREESFERKGLIDYNFHC XP_005 SKLAASFQSMEVRNSNFAAFIDIFTSNTYVMVVMSDPSIPSAATLINIRNARKHFEKLER 270 280 290 300 310 320 >>NP_057740 (OMIM: 300725) ras-related GTP-binding prote (374 aa) initn: 258 init1: 105 opt: 226 Z-score: 218.3 bits: 49.2 E(85289): 2e-05 Smith-Waterman score: 247; 27.6% identity (57.1% similar) in 261 aa overlap (43-271:24-276) 20 30 40 50 60 70 pF1KE3 AGSYGAADSFPKDFGYGVEEEEEEAAAAGGGVGAGAGGGCGPGGADSSKPRILLMGLRRS : :. : :. : : ..:::: : NP_057 MEESDSEKTTEKENLGPRMDPPLGEPEGSLGWVLPNTA--MKKKVLLMGKSGS 10 20 30 40 50 80 90 100 110 pF1KE3 GKSSIQKVVFHKMSPNETLFLEST--NKIYK-------------DDISNS-------SFV ::.:.....: .. .: : .: ..:.. :...:. : : NP_057 GKTSMRSIIFANYIARDTRRLGATILDRIHSLQINSSLSTYSLVDSVGNTKTFDVEHSHV 60 70 80 90 100 110 120 130 140 150 160 pF1KE3 NF------QIWDFPGQMDFFDPTF--DYEMIFRGTGALIYVIDAQDDYMEALTRLHITVS : ..:: :: :.. : . . :::.. .::::.:... .: . . . NP_057 RFLGNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCL 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE3 KAYKVN-PDMNFEVFIHKVDGLSDDHKIETQRD-IHQRANDDLADAGLEKLHLSFYLTSI .: : :: .. ..::.: ...: ::: : .. ..:: . . :. : . ::: NP_057 EAILQNSPDAKIFCLVHKMDLVQED-----QRDLIFKEREEDLRRLS-RPLECSCFRTSI 180 190 200 210 220 230 240 250 260 270 280 pF1KE3 YDHSIFEAFSKVVQKLIPQLPTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSSPVDMQ .:.....:.:..: .:::.. :: : : ....::. .. . :. NP_057 WDETLYKAWSSIVYQLIPNVQQLEMNLRNFAEIIEADEVLLFERATFLVISHYQCKEQRD 230 240 250 260 270 280 290 300 310 320 330 340 pF1KE3 SYELCCDMIDVVIDVSCIYGLKEDGSGSAYDKESMAIIKLNNTTVLYLKEVTKFLALVCI NP_057 AHRFEKISNIIKQFKLSCSKLAASFQSMEVRNSNFAAFIDIFTSNTYVMVVMSDPSIPSA 290 300 310 320 330 340 399 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 08:56:25 2016 done: Sun Nov 6 08:56:26 2016 Total Scan time: 7.640 Total Display time: 0.030 Function used was FASTA [36.3.4 Apr, 2011]