FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9674, 954 aa 1>>>pF1KE9674 954 - 954 aa - 954 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.8655+/-0.00111; mu= 4.6428+/- 0.066 mean_var=174.5529+/-35.047, 0's: 0 Z-trim(108.3): 73 B-trim: 5 in 1/50 Lambda= 0.097076 statistics sampled from 10045 (10112) to 10045 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.663), E-opt: 0.2 (0.311), width: 16 Scan time: 4.020 The best scores are: opt bits E(32554) CCDS2403.1 SMARCAL1 gene_id:50485|Hs108|chr2 ( 954) 6236 886.5 0 CCDS67963.1 ZRANB3 gene_id:84083|Hs108|chr2 (1077) 854 132.8 3.6e-30 CCDS46419.1 ZRANB3 gene_id:84083|Hs108|chr2 (1079) 854 132.8 3.6e-30 >>CCDS2403.1 SMARCAL1 gene_id:50485|Hs108|chr2 (954 aa) initn: 6236 init1: 6236 opt: 6236 Z-score: 4729.6 bits: 886.5 E(32554): 0 Smith-Waterman score: 6236; 99.8% identity (100.0% similar) in 954 aa overlap (1-954:1-954) 10 20 30 40 50 60 pF1KE9 MSLPLTEEQRKKIEENRQKALGRRAEKLLAEQHQRTSSGTSIAGNPFQAKQGPSQNFPRE :::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: CCDS24 MSLPLTEEQRKKIEENRQKALARRAEKLLAEQHQRTSSGTSIAGNPFQAKQGPSQNFPRE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 SCKPVSHGVIFKQQNLSSSSNADQRPHDSHSFQAKGIWKKPEEMPTACPGHSPRSQMALT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 SCKPVSHGVIFKQQNLSSSSNADQRPHDSHSFQAKGIWKKPEEMPTACPGHSPRSQMALT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 GISPPLAQSPPEVPKQQLLSYELGQGHAQASPEIRFTPFANPTHKPLAKPKSSQETPAHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 GISPPLAQSPPEVPKQQLLSYELGQGHAQASPEIRFTPFANPTHKPLAKPKSSQETPAHS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 SGQPPRDAKLEAKTAKASPSGQNISYIHSSSESVTPRTEGRLQQKSGSSVQKGVNSQKGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 SGQPPRDAKLEAKTAKASPSGQNISYIHSSSESVTPRTEGRLQQKSGSSVQKGVNSQKGK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE9 CVRNGDRFQVLIGYNAELIAVFKTLPSKNYDPDTKTWNFSMNDYSALMKAAQSLPTVNLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 CVRNGDRFQVLIGYNAELIAVFKTLPSKNYDPDTKTWNFSMNDYSALMKAAQSLPTVNLQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE9 PLEWAYGSSESPSTSSEGQAGLPSAPSLSFVKGRCMLISRAYFEADISYSQDLIALFKQM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 PLEWAYGSSESPSTSSEGQAGLPSAPSLSFVKGRCMLISRAYFEADISYSQDLIALFKQM 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE9 DSRRYDVKTRKWSFLLQEHSKLIAKVRCLPQVQLDPLPTTLTLAFASQLKKTSLSLTPDV ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: CCDS24 DSRRYDVKTRKWSFLLEEHSKLIAKVRCLPQVQLDPLPTTLTLAFASQLKKTSLSLTPDV 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE9 PEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 PEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWP 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE9 LLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVTGKDRLTAGLINIVSFDLLSKLEKQLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 LLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVTGKDRLTAGLINIVSFDLLSKLEKQLK 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE9 TPFKVVIIDESHFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 TPFKVVIIDESHFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPT 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE9 FFPQFHAFGLRYCDAKRMPWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 FFPQFHAFGLRYCDAKRMPWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRK 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE9 IVVIAPGRINARTRAALDAAAKEMTTKDKTKQQQKDALILFFNRTAEAKIPSVIEYILDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 IVVIAPGRINARTRAALDAAAKEMTTKDKTKQQQKDALILFFNRTAEAKIPSVIEYILDL 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE9 LESGREKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 LESGREKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVA 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE9 VLSITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 VLSITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADD 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE9 YLWPLIQEKIKVLAEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQKSFEKEGSDMELL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 YLWPLIQEKIKVLAEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQKSFEKEGSDMELL 850 860 870 880 890 900 910 920 930 940 950 pF1KE9 EAAESFDPGSASGTSGSSSQNMGDTLDESSLTASPQKKRRFEFFDNWDSFTSPL :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 EAAESFDPGSASGTSGSSSQNMGDTLDESSLTASPQKKRRFEFFDNWDSFTSPL 910 920 930 940 950 >>CCDS67963.1 ZRANB3 gene_id:84083|Hs108|chr2 (1077 aa) initn: 1120 init1: 488 opt: 854 Z-score: 655.1 bits: 132.8 E(32554): 3.6e-30 Smith-Waterman score: 1206; 44.2% identity (72.0% similar) in 457 aa overlap (415-852:10-465) 390 400 410 420 430 pF1KE9 KVRCLPQVQLDPLPTTLTLAFASQLKKTSLSLTPDVP----EAD--LSEVDPKLVSNLMP :::: . :.: :. . .: ..:.: CCDS67 MPRVHNIKKSLTPHISCVTNESDNLLDFLPDRLRAKLLP 10 20 30 440 450 460 470 480 490 pF1KE9 FQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFL ::. :. ::. ..:: ..::.:::::::::: :. ::..:::::.:::::.:. : . . CCDS67 FQKDGIIFALKRNGRCMVADEMGLGKTIQAIGITYFYKEEWPLLIVVPSSLRYPWTEEIE 40 50 60 70 80 90 500 510 520 530 540 550 pF1KE9 RWLPSLSPDCINVVVTGKD--RLTAGLINIVSFDLLSKLEKQL-----KTPFKVVIIDES .:.: :::. :::. . : :.... ...... ::. : : . :::::.::: CCDS67 KWIPELSPEEINVIQNKTDVRRMSTSKVTVLGYGLLTADAKTLIDALNNQNFKVVIVDES 100 110 120 130 140 150 560 570 580 590 600 610 pF1KE9 HFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLR :..:. ..: : .:... :.:.:::.::::..:: ::. :: :. : : .. .. : CCDS67 HYMKSRNATRSRILLPIVQKARRAILLTGTPALGRPEELFMQIEALFPQKFGRWTDYAKR 160 170 180 190 200 210 620 630 640 650 660 pF1KE9 YCDAKRMPWG----WDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQR-KIVVIAP ::.:. .: :: :.:::.::. :: . .:.::::..::.::: : : .: : CCDS67 YCNAHIRYFGKRPQWDCRGASNLNELHQLLSD-IMIRRLKTEVLTQLPPKVRQRIPFDLP 220 230 240 250 260 270 670 680 690 700 710 720 pF1KE9 GRINARTRAALDAAAKEMTTKDKTKQQQKDALIL-FFNRTAEAKIPSVIEYILDLLESGR . . .... : : : .. .. .:: .:..:: :: .: .:: .:.. CCDS67 SAAAKELNTSFEEWEKIMRTPNSGAMETVMGLITRMFKQTAIAKAGAVKDYIKMMLQNDS 280 290 300 310 320 330 730 740 750 760 770 780 pF1KE9 EKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSIT :::::::: .:.: :. . ......::::::.::.:: : .::: . ::.::: CCDS67 LKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSSERIHLVNQFQKDPDTRVAILSIQ 340 350 360 370 380 390 790 800 810 820 830 840 pF1KE9 AANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPL ::..::::..:. ::::::.:.:: . :::::.::::: :::.::::.:.:: : .: . CCDS67 AAGQGLTFTAASHVVFAELYWDPGHIKQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGM 400 410 420 430 440 450 850 860 870 880 890 900 pF1KE9 IQEKIKVLAEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQKSFEKEGSDMELLEAAES ...: .: CCDS67 LNRKAQVTGSTLNGRKEKIQAEEGDKEKWDFLQFAEAWTPNDSSEELRKEALFTHFEKEK 460 470 480 490 500 510 >>CCDS46419.1 ZRANB3 gene_id:84083|Hs108|chr2 (1079 aa) initn: 1120 init1: 488 opt: 854 Z-score: 655.1 bits: 132.8 E(32554): 3.6e-30 Smith-Waterman score: 1206; 44.2% identity (72.0% similar) in 457 aa overlap (415-852:10-465) 390 400 410 420 430 pF1KE9 KVRCLPQVQLDPLPTTLTLAFASQLKKTSLSLTPDVP----EAD--LSEVDPKLVSNLMP :::: . :.: :. . .: ..:.: CCDS46 MPRVHNIKKSLTPHISCVTNESDNLLDFLPDRLRAKLLP 10 20 30 440 450 460 470 480 490 pF1KE9 FQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFL ::. :. ::. ..:: ..::.:::::::::: :. ::..:::::.:::::.:. : . . CCDS46 FQKDGIIFALKRNGRCMVADEMGLGKTIQAIGITYFYKEEWPLLIVVPSSLRYPWTEEIE 40 50 60 70 80 90 500 510 520 530 540 550 pF1KE9 RWLPSLSPDCINVVVTGKD--RLTAGLINIVSFDLLSKLEKQL-----KTPFKVVIIDES .:.: :::. :::. . : :.... ...... ::. : : . :::::.::: CCDS46 KWIPELSPEEINVIQNKTDVRRMSTSKVTVLGYGLLTADAKTLIDALNNQNFKVVIVDES 100 110 120 130 140 150 560 570 580 590 600 610 pF1KE9 HFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLR :..:. ..: : .:... :.:.:::.::::..:: ::. :: :. : : .. .. : CCDS46 HYMKSRNATRSRILLPIVQKARRAILLTGTPALGRPEELFMQIEALFPQKFGRWTDYAKR 160 170 180 190 200 210 620 630 640 650 660 pF1KE9 YCDAKRMPWG----WDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQR-KIVVIAP ::.:. .: :: :.:::.::. :: . .:.::::..::.::: : : .: : CCDS46 YCNAHIRYFGKRPQWDCRGASNLNELHQLLSD-IMIRRLKTEVLTQLPPKVRQRIPFDLP 220 230 240 250 260 270 670 680 690 700 710 720 pF1KE9 GRINARTRAALDAAAKEMTTKDKTKQQQKDALIL-FFNRTAEAKIPSVIEYILDLLESGR . . .... : : : .. .. .:: .:..:: :: .: .:: .:.. CCDS46 SAAAKELNTSFEEWEKIMRTPNSGAMETVMGLITRMFKQTAIAKAGAVKDYIKMMLQNDS 280 290 300 310 320 330 730 740 750 760 770 780 pF1KE9 EKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSIT :::::::: .:.: :. . ......::::::.::.:: : .::: . ::.::: CCDS46 LKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSSERIHLVNQFQKDPDTRVAILSIQ 340 350 360 370 380 390 790 800 810 820 830 840 pF1KE9 AANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPL ::..::::..:. ::::::.:.:: . :::::.::::: :::.::::.:.:: : .: . CCDS46 AAGQGLTFTAASHVVFAELYWDPGHIKQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGM 400 410 420 430 440 450 850 860 870 880 890 900 pF1KE9 IQEKIKVLAEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQKSFEKEGSDMELLEAAES ...: .: CCDS46 LNRKAQVTGSTLNGRKEKIQAEEGDKEKWDFLQFAEAWTPNDSSEELRKEALFTHFEKEK 460 470 480 490 500 510 954 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 01:10:41 2016 done: Mon Nov 7 01:10:41 2016 Total Scan time: 4.020 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]