FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1310, 397 aa 1>>>pF1KE1310 397 - 397 aa - 397 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.9379+/-0.00108; mu= -8.0539+/- 0.065 mean_var=303.8869+/-60.578, 0's: 0 Z-trim(114.1): 15 B-trim: 110 in 1/52 Lambda= 0.073573 statistics sampled from 14654 (14662) to 14654 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.773), E-opt: 0.2 (0.45), width: 16 Scan time: 3.500 The best scores are: opt bits E(32554) CCDS10779.1 CX3CL1 gene_id:6376|Hs108|chr16 ( 397) 2695 299.2 4.3e-81 >>CCDS10779.1 CX3CL1 gene_id:6376|Hs108|chr16 (397 aa) initn: 2695 init1: 2695 opt: 2695 Z-score: 1569.3 bits: 299.2 E(32554): 4.3e-81 Smith-Waterman score: 2695; 100.0% identity (100.0% similar) in 397 aa overlap (1-397:1-397) 10 20 30 40 50 60 pF1KE1 MAPISLSWLLRLATFCHLTVLLAGQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MAPISLSWLLRLATFCHLTVLLAGQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 RAIILETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTTPAAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 RAIILETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTTPAAGG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 MDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 VGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 VGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 PSEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 PSEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSRE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 PVASGSWTPKAEEPIHATMDPQRLGVLITPVPDAQAATRRQAVGLLAFLGLLFCLGVAMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 PVASGSWTPKAEEPIHATMDPQRLGVLITPVPDAQAATRRQAVGLLAFLGLLFCLGVAMF 310 320 330 340 350 360 370 380 390 pF1KE1 TYQSLQGCPRKMAGEMAEGLRYIPRSCGSNSYVLVPV ::::::::::::::::::::::::::::::::::::: CCDS10 TYQSLQGCPRKMAGEMAEGLRYIPRSCGSNSYVLVPV 370 380 390 397 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 01:13:16 2016 done: Mon Nov 7 01:13:16 2016 Total Scan time: 3.500 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]