FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9658, 211 aa 1>>>pF1KE9658 211 - 211 aa - 211 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.8500+/-0.00084; mu= 10.1265+/- 0.050 mean_var=62.7510+/-12.424, 0's: 0 Z-trim(106.1): 15 B-trim: 0 in 0/51 Lambda= 0.161906 statistics sampled from 8767 (8773) to 8767 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.664), E-opt: 0.2 (0.269), width: 16 Scan time: 1.930 The best scores are: opt bits E(32554) CCDS134.1 MAD2L2 gene_id:10459|Hs108|chr1 ( 211) 1398 335.0 2e-92 >>CCDS134.1 MAD2L2 gene_id:10459|Hs108|chr1 (211 aa) initn: 1398 init1: 1398 opt: 1398 Z-score: 1772.7 bits: 335.0 E(32554): 2e-92 Smith-Waterman score: 1398; 100.0% identity (100.0% similar) in 211 aa overlap (1-211:1-211) 10 20 30 40 50 60 pF1KE9 MTTLTRQDLNFGQVVADVLCEFLEVAVHLILYVREVYPVGIFQKRKKYNVPVQMSCHPEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MTTLTRQDLNFGQVVADVLCEFLEVAVHLILYVREVYPVGIFQKRKKYNVPVQMSCHPEL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 NQYIQDTLHCVKPLLEKNDVEKVVVVILDKEHRPVEKFVFEITQPPLLSISSDSLLSHVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 NQYIQDTLHCVKPLLEKNDVEKVVVVILDKEHRPVEKFVFEITQPPLLSISSDSLLSHVE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 QLLRAFILKISVCDAVLDHNPPGCTFTVLVHTREAATRNMEKIQVIKDFPWILADEQDVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 QLLRAFILKISVCDAVLDHNPPGCTFTVLVHTREAATRNMEKIQVIKDFPWILADEQDVH 130 140 150 160 170 180 190 200 210 pF1KE9 MHDPRLIPLKTMTSDILKMQLYVEERAHKGS ::::::::::::::::::::::::::::::: CCDS13 MHDPRLIPLKTMTSDILKMQLYVEERAHKGS 190 200 210 211 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 22:31:43 2016 done: Mon Nov 7 22:31:43 2016 Total Scan time: 1.930 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]