FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6113, 134 aa 1>>>pF1KE6113 134 - 134 aa - 134 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.8215+/-0.000631; mu= 13.9962+/- 0.038 mean_var=60.0462+/-11.966, 0's: 0 Z-trim(110.1): 19 B-trim: 0 in 0/53 Lambda= 0.165513 statistics sampled from 11358 (11372) to 11358 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.745), E-opt: 0.2 (0.349), width: 16 Scan time: 1.550 The best scores are: opt bits E(32554) CCDS12004.1 CYB5A gene_id:1528|Hs108|chr18 ( 134) 897 221.7 1.1e-58 CCDS12005.1 CYB5A gene_id:1528|Hs108|chr18 ( 98) 656 164.1 1.8e-41 CCDS54188.1 CYB5A gene_id:1528|Hs108|chr18 ( 124) 575 144.8 1.4e-35 CCDS10880.2 CYB5B gene_id:80777|Hs108|chr16 ( 150) 457 116.7 5e-27 >>CCDS12004.1 CYB5A gene_id:1528|Hs108|chr18 (134 aa) initn: 897 init1: 897 opt: 897 Z-score: 1167.2 bits: 221.7 E(32554): 1.1e-58 Smith-Waterman score: 897; 100.0% identity (100.0% similar) in 134 aa overlap (1-134:1-134) 10 20 30 40 50 60 pF1KE6 MAEQSDEAVKYYTLEEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MAEQSDEAVKYYTLEEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDAT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 ENFEDVGHSTDAREMSKTFIIGELHPDDRPKLNKPPETLITTIDSSSSWWTNWVIPAISA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 ENFEDVGHSTDAREMSKTFIIGELHPDDRPKLNKPPETLITTIDSSSSWWTNWVIPAISA 70 80 90 100 110 120 130 pF1KE6 VAVALMYRLYMAED :::::::::::::: CCDS12 VAVALMYRLYMAED 130 >>CCDS12005.1 CYB5A gene_id:1528|Hs108|chr18 (98 aa) initn: 656 init1: 656 opt: 656 Z-score: 858.2 bits: 164.1 E(32554): 1.8e-41 Smith-Waterman score: 656; 100.0% identity (100.0% similar) in 97 aa overlap (1-97:1-97) 10 20 30 40 50 60 pF1KE6 MAEQSDEAVKYYTLEEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MAEQSDEAVKYYTLEEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDAT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 ENFEDVGHSTDAREMSKTFIIGELHPDDRPKLNKPPETLITTIDSSSSWWTNWVIPAISA ::::::::::::::::::::::::::::::::::::: CCDS12 ENFEDVGHSTDAREMSKTFIIGELHPDDRPKLNKPPEP 70 80 90 130 pF1KE6 VAVALMYRLYMAED >>CCDS54188.1 CYB5A gene_id:1528|Hs108|chr18 (124 aa) initn: 575 init1: 575 opt: 575 Z-score: 752.2 bits: 144.8 E(32554): 1.4e-35 Smith-Waterman score: 790; 92.5% identity (92.5% similar) in 134 aa overlap (1-134:1-124) 10 20 30 40 50 60 pF1KE6 MAEQSDEAVKYYTLEEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 MAEQSDEAVKYYTLEEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDAT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 ENFEDVGHSTDAREMSKTFIIGELHPDDRPKLNKPPETLITTIDSSSSWWTNWVIPAISA :::::::::::::::::::::::::: :::::::::::::::::::::::: CCDS54 ENFEDVGHSTDAREMSKTFIIGELHP----------ETLITTIDSSSSWWTNWVIPAISA 70 80 90 100 110 130 pF1KE6 VAVALMYRLYMAED :::::::::::::: CCDS54 VAVALMYRLYMAED 120 >>CCDS10880.2 CYB5B gene_id:80777|Hs108|chr16 (150 aa) initn: 395 init1: 368 opt: 457 Z-score: 598.7 bits: 116.7 E(32554): 5e-27 Smith-Waterman score: 457; 50.4% identity (75.9% similar) in 133 aa overlap (3-133:18-146) 10 20 30 40 pF1KE6 MAEQSDEAVKYYTLEEIQKHNHSKSTWLILHHKVYDLTKFLEEHP .. . .: :: :::. :.: : ::..: .:::.:.::.::: CCDS10 MSGSMATAEASGSDGKGQEVETSVTYYRLEEVAKRNSLKELWLVIHGRVYDVTRFLNEHP 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE6 GGEEVLREQAGGDATENFEDVGHSTDAREMSKTFIIGELHPDD-RPKL-NKPPETLITTI :::::: :::: ::.:.:::::::.::::: : . ::..::.: .:. .: : . CCDS10 GGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYIGDIHPSDLKPESGSKDP----SKN 70 80 90 100 110 110 120 130 pF1KE6 DSSSSWWTNWVIPAISAVAVALMYRLYMAED :. .: :. :..: :.:: ....:: : .: CCDS10 DTCKSCWAYWILPIIGAVLLGFLYRYYTSESKSS 120 130 140 150 134 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 09:33:44 2016 done: Tue Nov 8 09:33:45 2016 Total Scan time: 1.550 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]