Result of FASTA (omim) for
pFN21AE4526
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4526, 574 aa
1>>>pF1KE4526 574 - 574 aa - 574 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.9370+/-0.000396; mu= -5.0910+/- 0.025
mean_var=394.1419+/-80.466, 0's: 0 Z-trim(123.0): 24 B-trim: 0 in 0/62
Lambda= 0.064602
statistics sampled from 41996 (42023) to 41996 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.789), E-opt: 0.2 (0.493), width: 16
Scan time: 12.830
The best scores are: opt bits E(85289)
NP_005567 (OMIM: 153456,177650) lysyl oxidase homo ( 574) 4089 395.3 2.9e-109
XP_011519857 (OMIM: 153456,177650) PREDICTED: lysy ( 445) 2636 259.8 1.4e-68
XP_016877668 (OMIM: 153456,177650) PREDICTED: lysy ( 225) 1468 150.6 5.1e-36
NP_002308 (OMIM: 153455,617168) protein-lysine 6-o ( 417) 1211 126.9 1.3e-28
NP_001171573 (OMIM: 153455,617168) protein-lysine ( 187) 1057 112.2 1.5e-24
XP_016860601 (OMIM: 607163) PREDICTED: lysyl oxida ( 392) 758 84.7 6.2e-16
NP_001276094 (OMIM: 607163) lysyl oxidase homolog ( 392) 758 84.7 6.2e-16
NP_001276093 (OMIM: 607163) lysyl oxidase homolog ( 608) 758 84.9 8.5e-16
NP_115992 (OMIM: 607163) lysyl oxidase homolog 3 i ( 753) 758 84.9 9.9e-16
XP_011531436 (OMIM: 607163) PREDICTED: lysyl oxida ( 753) 758 84.9 9.9e-16
NP_115587 (OMIM: 607318) lysyl oxidase homolog 4 p ( 756) 739 83.2 3.4e-15
XP_006718083 (OMIM: 607318) PREDICTED: lysyl oxida ( 757) 739 83.2 3.4e-15
XP_005270273 (OMIM: 607318) PREDICTED: lysyl oxida ( 757) 739 83.2 3.4e-15
NP_002309 (OMIM: 606663) lysyl oxidase homolog 2 p ( 774) 738 83.1 3.7e-15
NP_001304002 (OMIM: 153455,617168) protein-lysine ( 120) 660 75.0 1.5e-13
>>NP_005567 (OMIM: 153456,177650) lysyl oxidase homolog (574 aa)
initn: 4089 init1: 4089 opt: 4089 Z-score: 2082.7 bits: 395.3 E(85289): 2.9e-109
Smith-Waterman score: 4089; 100.0% identity (100.0% similar) in 574 aa overlap (1-574:1-574)
10 20 30 40 50 60
pF1KE4 MALARGSRQLGALVWGACLCVLVHGQQAQPGQGSDPARWRQLIQWENNGQVYSLLNSGSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MALARGSRQLGALVWGACLCVLVHGQQAQPGQGSDPARWRQLIQWENNGQVYSLLNSGSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 YVPAGPQRSESSSRVLLAGAPQAQQRRSHGSPRRRQAPSLPLPGRVGSDTVRGQARHPFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 YVPAGPQRSESSSRVLLAGAPQAQQRRSHGSPRRRQAPSLPLPGRVGSDTVRGQARHPFG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 FGQVPDNWREVAVGDSTGMARARTSVSQQRHGGSASSVSASAFASTYRQQPSYPQQFPYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 FGQVPDNWREVAVGDSTGMARARTSVSQQRHGGSASSVSASAFASTYRQQPSYPQQFPYP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 QAPFVSQYENYDPASRTYDQGFVYYRPAGGGVGAGAAAVASAGVIYPYQPRARYEEYGGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 QAPFVSQYENYDPASRTYDQGFVYYRPAGGGVGAGAAAVASAGVIYPYQPRARYEEYGGG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 EELPEYPPQGFYPAPERPYVPPPPPPPDGLDRRYSHSLYSEGTPGFEQAYPDPGPEAAQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 EELPEYPPQGFYPAPERPYVPPPPPPPDGLDRRYSHSLYSEGTPGFEQAYPDPGPEAAQA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 HGGDPRLGWYPPYANPPPEAYGPPRALEPPYLPVRSSDTPPPGGERNGAQQGRLSVGSVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 HGGDPRLGWYPPYANPPPEAYGPPRALEPPYLPVRSSDTPPPGGERNGAQQGRLSVGSVY
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 RPNQNGRGLPDLVPDPNYVQASTYVQRAHLYSLRCAAEEKCLASTAYAPEATDYDVRVLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RPNQNGRGLPDLVPDPNYVQASTYVQRAHLYSLRCAAEEKCLASTAYAPEATDYDVRVLL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 RFPQRVKNQGTADFLPNRPRHTWEWHSCHQHYHSMDEFSHYDLLDAATGKKVAEGHKASF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RFPQRVKNQGTADFLPNRPRHTWEWHSCHQHYHSMDEFSHYDLLDAATGKKVAEGHKASF
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE4 CLEDSTCDFGNLKRYACTSHTQGLSPGCYDTYNADIDCQWIDITDVQPGNYILKVHVNPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 CLEDSTCDFGNLKRYACTSHTQGLSPGCYDTYNADIDCQWIDITDVQPGNYILKVHVNPK
490 500 510 520 530 540
550 560 570
pF1KE4 YIVLESDFTNNVVRCNIHYTGRYVSATNCKIVQS
::::::::::::::::::::::::::::::::::
NP_005 YIVLESDFTNNVVRCNIHYTGRYVSATNCKIVQS
550 560 570
>>XP_011519857 (OMIM: 153456,177650) PREDICTED: lysyl ox (445 aa)
initn: 2625 init1: 2625 opt: 2636 Z-score: 1352.2 bits: 259.8 E(85289): 1.4e-68
Smith-Waterman score: 2636; 98.7% identity (98.9% similar) in 374 aa overlap (1-374:1-374)
10 20 30 40 50 60
pF1KE4 MALARGSRQLGALVWGACLCVLVHGQQAQPGQGSDPARWRQLIQWENNGQVYSLLNSGSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MALARGSRQLGALVWGACLCVLVHGQQAQPGQGSDPARWRQLIQWENNGQVYSLLNSGSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 YVPAGPQRSESSSRVLLAGAPQAQQRRSHGSPRRRQAPSLPLPGRVGSDTVRGQARHPFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YVPAGPQRSESSSRVLLAGAPQAQQRRSHGSPRRRQAPSLPLPGRVGSDTVRGQARHPFG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 FGQVPDNWREVAVGDSTGMARARTSVSQQRHGGSASSVSASAFASTYRQQPSYPQQFPYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FGQVPDNWREVAVGDSTGMARARTSVSQQRHGGSASSVSASAFASTYRQQPSYPQQFPYP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 QAPFVSQYENYDPASRTYDQGFVYYRPAGGGVGAGAAAVASAGVIYPYQPRARYEEYGGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QAPFVSQYENYDPASRTYDQGFVYYRPAGGGVGAGAAAVASAGVIYPYQPRARYEEYGGG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 EELPEYPPQGFYPAPERPYVPPPPPPPDGLDRRYSHSLYSEGTPGFEQAYPDPGPEAAQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EELPEYPPQGFYPAPERPYVPPPPPPPDGLDRRYSHSLYSEGTPGFEQAYPDPGPEAAQA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 HGGDPRLGWYPPYANPPPEAYGPPRALEPPYLPVRSSDTPPPGGERNGAQQGRLSVGSVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HGGDPRLGWYPPYANPPPEAYGPPRALEPPYLPVRSSDTPPPGGERNGAQQGRLSVGSVY
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 RPNQNGRGLPDLVPDPNYVQASTYVQRAHLYSLRCAAEEKCLASTAYAPEATDYDVRVLL
::::::: : .:
XP_011 RPNQNGRVTPAQTPACPGRKVEGQEQDGQAPGSGTSWGTRDHKDGGSLQTSPGRLTPGLA
370 380 390 400 410 420
>>XP_016877668 (OMIM: 153456,177650) PREDICTED: lysyl ox (225 aa)
initn: 1468 init1: 1468 opt: 1468 Z-score: 767.7 bits: 150.6 E(85289): 5.1e-36
Smith-Waterman score: 1468; 98.6% identity (99.5% similar) in 211 aa overlap (364-574:15-225)
340 350 360 370 380 390
pF1KE4 VRSSDTPPPGGERNGAQQGRLSVGSVYRPNQNGRGLPDLVPDPNYVQASTYVQRAHLYSL
:..: :::::::::::::::::::::::::
XP_016 MSKLFQEVLAAPTPQSSRCLPDLVPDPNYVQASTYVQRAHLYSL
10 20 30 40
400 410 420 430 440 450
pF1KE4 RCAAEEKCLASTAYAPEATDYDVRVLLRFPQRVKNQGTADFLPNRPRHTWEWHSCHQHYH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RCAAEEKCLASTAYAPEATDYDVRVLLRFPQRVKNQGTADFLPNRPRHTWEWHSCHQHYH
50 60 70 80 90 100
460 470 480 490 500 510
pF1KE4 SMDEFSHYDLLDAATGKKVAEGHKASFCLEDSTCDFGNLKRYACTSHTQGLSPGCYDTYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SMDEFSHYDLLDAATGKKVAEGHKASFCLEDSTCDFGNLKRYACTSHTQGLSPGCYDTYN
110 120 130 140 150 160
520 530 540 550 560 570
pF1KE4 ADIDCQWIDITDVQPGNYILKVHVNPKYIVLESDFTNNVVRCNIHYTGRYVSATNCKIVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ADIDCQWIDITDVQPGNYILKVHVNPKYIVLESDFTNNVVRCNIHYTGRYVSATNCKIVQ
170 180 190 200 210 220
pF1KE4 S
:
XP_016 S
>>NP_002308 (OMIM: 153455,617168) protein-lysine 6-oxida (417 aa)
initn: 1343 init1: 1168 opt: 1211 Z-score: 634.8 bits: 126.9 E(85289): 1.3e-28
Smith-Waterman score: 1211; 64.4% identity (80.7% similar) in 270 aa overlap (308-571:149-414)
280 290 300 310 320 330
pF1KE4 LYSEGTPGFEQAYPDPGPEAAQAHGGDPRLGWYPPYAN--PPPEAYGPPRALEPPYLPVR
: : .: :: .. : . . :: : .
NP_002 PTARHWFQAGYSTSRAREAGASRAENQTAPGEVPALSNLRPPSRVDG--MVGDDPYNPYK
120 130 140 150 160 170
340 350 360 370 380 390
pF1KE4 SSDTPPPGGERNGAQQGRLSVGSVYRPNQNG----RGLPDLVPDPNYVQASTYVQRAHLY
:: : . . .. : :. :::. . :::::: :: :.:::::::. .:
NP_002 YSDDNPYYNYYDTYERPR--PGGRYRPGYGTGYFQYGLPDLVADPYYIQASTYVQKMSMY
180 190 200 210 220 230
400 410 420 430 440 450
pF1KE4 SLRCAAEEKCLASTAYAPEATDYDVRVLLRFPQRVKNQGTADFLPNRPRHTWEWHSCHQH
.:::::::.::::::: .. ::: :::::::::::::::.::::.:::..:::::::::
NP_002 NLRCAAEENCLASTAYRADVRDYDHRVLLRFPQRVKNQGTSDFLPSRPRYSWEWHSCHQH
240 250 260 270 280 290
460 470 480 490 500 510
pF1KE4 YHSMDEFSHYDLLDAATGKKVAEGHKASFCLEDSTCDFGNLKRYACTSHTQGLSPGCYDT
::::::::::::::: : ..:::::::::::::..::.: .:.:::.::::::::::::
NP_002 YHSMDEFSHYDLLDANTQRRVAEGHKASFCLEDTSCDYGYHRRFACTAHTQGLSPGCYDT
300 310 320 330 340 350
520 530 540 550 560 570
pF1KE4 YNADIDCQWIDITDVQPGNYILKVHVNPKYIVLESDFTNNVVRCNIHYTGRYVSATNCKI
:.:::::::::::::.:::::::: :::.:.: :::.:::::::.:.:::... :..: :
NP_002 YGADIDCQWIDITDVKPGNYILKVSVNPSYLVPESDYTNNVVRCDIRYTGHHAYASGCTI
360 370 380 390 400 410
pF1KE4 VQS
NP_002 SPY
>>NP_001171573 (OMIM: 153455,617168) protein-lysine 6-ox (187 aa)
initn: 1045 init1: 1045 opt: 1057 Z-score: 561.7 bits: 112.2 E(85289): 1.5e-24
Smith-Waterman score: 1057; 77.5% identity (93.4% similar) in 182 aa overlap (390-571:3-184)
360 370 380 390 400 410
pF1KE4 YRPNQNGRGLPDLVPDPNYVQASTYVQRAHLYSLRCAAEEKCLASTAYAPEATDYDVRVL
.:.:::::::.::::::: .. ::: :::
NP_001 MSMYNLRCAAEENCLASTAYRADVRDYDHRVL
10 20 30
420 430 440 450 460 470
pF1KE4 LRFPQRVKNQGTADFLPNRPRHTWEWHSCHQHYHSMDEFSHYDLLDAATGKKVAEGHKAS
::::::::::::.::::.:::..:::::::::::::::::::::::: : ..::::::::
NP_001 LRFPQRVKNQGTSDFLPSRPRYSWEWHSCHQHYHSMDEFSHYDLLDANTQRRVAEGHKAS
40 50 60 70 80 90
480 490 500 510 520 530
pF1KE4 FCLEDSTCDFGNLKRYACTSHTQGLSPGCYDTYNADIDCQWIDITDVQPGNYILKVHVNP
:::::..::.: .:.:::.:::::::::::::.:::::::::::::.:::::::: :::
NP_001 FCLEDTSCDYGYHRRFACTAHTQGLSPGCYDTYGADIDCQWIDITDVKPGNYILKVSVNP
100 110 120 130 140 150
540 550 560 570
pF1KE4 KYIVLESDFTNNVVRCNIHYTGRYVSATNCKIVQS
.:.: :::.:::::::.:.:::... :..: :
NP_001 SYLVPESDYTNNVVRCDIRYTGHHAYASGCTISPY
160 170 180
>>XP_016860601 (OMIM: 607163) PREDICTED: lysyl oxidase h (392 aa)
initn: 748 init1: 507 opt: 758 Z-score: 407.0 bits: 84.7 E(85289): 6.2e-16
Smith-Waterman score: 758; 54.0% identity (73.8% similar) in 202 aa overlap (371-571:169-368)
350 360 370 380 390 400
pF1KE4 PPGGERNGAQQGRLSVGSVYRPNQNGRGLPDLVPDPNYVQASTYVQRAHLYSLRCAAEEK
::. :: ..:.. :. : :::::.
XP_016 DQCAHHGTHITCKRTGTRFTAGVICSETASDLLLHSALVQETAYIEDRPLHMLYCAAEEN
140 150 160 170 180 190
410 420 430 440 450 460
pF1KE4 CLASTAYAPEATDYDVRVLLRFPQRVKNQGTADFLPNRPRHTWEWHSCHQHYHSMDEFSH
::::.: . . : : :::: ....: : ::: :. ::.: :: :: :::::: :.:
XP_016 CLASSARSANWP-YGHRRLLRFSSQIHNLGRADFRPKAGRHSWVWHECHGHYHSMDIFTH
200 210 220 230 240 250
470 480 490 500 510
pF1KE4 YDLLDAATGKKVAEGHKASFCLEDSTCDFGNLKRYACTSH-TQGLSPGCYDTYNADIDCQ
::.: . .: ::::::::::::::. :. ::: :.. ::.. ::.: : :::::
XP_016 YDIL-TPNGTKVAEGHKASFCLEDTECQEDVSKRYECANFGEQGITVGCWDLYRHDIDCQ
260 270 280 290 300 310
520 530 540 550 560 570
pF1KE4 WIDITDVQPGNYILKVHVNPKYIVLESDFTNNVVRCNIHYTGRYVSATNCKIVQS
:::::::.::::::.: .::.. : :::::::...:: .: :. . . ::.:
XP_016 WIDITDVKPGNYILQVVINPNFEVAESDFTNNAMKCNCKYDGHRIWVHNCHIGDAFSEEA
320 330 340 350 360 370
XP_016 NRRFERYPGQTSNQII
380 390
>>NP_001276094 (OMIM: 607163) lysyl oxidase homolog 3 is (392 aa)
initn: 748 init1: 507 opt: 758 Z-score: 407.0 bits: 84.7 E(85289): 6.2e-16
Smith-Waterman score: 758; 54.0% identity (73.8% similar) in 202 aa overlap (371-571:169-368)
350 360 370 380 390 400
pF1KE4 PPGGERNGAQQGRLSVGSVYRPNQNGRGLPDLVPDPNYVQASTYVQRAHLYSLRCAAEEK
::. :: ..:.. :. : :::::.
NP_001 DQCAHHGTHITCKRTGTRFTAGVICSETASDLLLHSALVQETAYIEDRPLHMLYCAAEEN
140 150 160 170 180 190
410 420 430 440 450 460
pF1KE4 CLASTAYAPEATDYDVRVLLRFPQRVKNQGTADFLPNRPRHTWEWHSCHQHYHSMDEFSH
::::.: . . : : :::: ....: : ::: :. ::.: :: :: :::::: :.:
NP_001 CLASSARSANWP-YGHRRLLRFSSQIHNLGRADFRPKAGRHSWVWHECHGHYHSMDIFTH
200 210 220 230 240 250
470 480 490 500 510
pF1KE4 YDLLDAATGKKVAEGHKASFCLEDSTCDFGNLKRYACTSH-TQGLSPGCYDTYNADIDCQ
::.: . .: ::::::::::::::. :. ::: :.. ::.. ::.: : :::::
NP_001 YDIL-TPNGTKVAEGHKASFCLEDTECQEDVSKRYECANFGEQGITVGCWDLYRHDIDCQ
260 270 280 290 300 310
520 530 540 550 560 570
pF1KE4 WIDITDVQPGNYILKVHVNPKYIVLESDFTNNVVRCNIHYTGRYVSATNCKIVQS
:::::::.::::::.: .::.. : :::::::...:: .: :. . . ::.:
NP_001 WIDITDVKPGNYILQVVINPNFEVAESDFTNNAMKCNCKYDGHRIWVHNCHIGDAFSEEA
320 330 340 350 360 370
NP_001 NRRFERYPGQTSNQII
380 390
>>NP_001276093 (OMIM: 607163) lysyl oxidase homolog 3 is (608 aa)
initn: 777 init1: 507 opt: 758 Z-score: 404.6 bits: 84.9 E(85289): 8.5e-16
Smith-Waterman score: 758; 54.0% identity (73.8% similar) in 202 aa overlap (371-571:385-584)
350 360 370 380 390 400
pF1KE4 PPGGERNGAQQGRLSVGSVYRPNQNGRGLPDLVPDPNYVQASTYVQRAHLYSLRCAAEEK
::. :: ..:.. :. : :::::.
NP_001 DQCAHHGTHITCKRTGTRFTAGVICSETASDLLLHSALVQETAYIEDRPLHMLYCAAEEN
360 370 380 390 400 410
410 420 430 440 450 460
pF1KE4 CLASTAYAPEATDYDVRVLLRFPQRVKNQGTADFLPNRPRHTWEWHSCHQHYHSMDEFSH
::::.: . . : : :::: ....: : ::: :. ::.: :: :: :::::: :.:
NP_001 CLASSARSANWP-YGHRRLLRFSSQIHNLGRADFRPKAGRHSWVWHECHGHYHSMDIFTH
420 430 440 450 460 470
470 480 490 500 510
pF1KE4 YDLLDAATGKKVAEGHKASFCLEDSTCDFGNLKRYACTSH-TQGLSPGCYDTYNADIDCQ
::.: . .: ::::::::::::::. :. ::: :.. ::.. ::.: : :::::
NP_001 YDIL-TPNGTKVAEGHKASFCLEDTECQEDVSKRYECANFGEQGITVGCWDLYRHDIDCQ
480 490 500 510 520 530
520 530 540 550 560 570
pF1KE4 WIDITDVQPGNYILKVHVNPKYIVLESDFTNNVVRCNIHYTGRYVSATNCKIVQS
:::::::.::::::.: .::.. : :::::::...:: .: :. . . ::.:
NP_001 WIDITDVKPGNYILQVVINPNFEVAESDFTNNAMKCNCKYDGHRIWVHNCHIGDAFSEEA
540 550 560 570 580 590
NP_001 NRRFERYPGQTSNQII
600
>>NP_115992 (OMIM: 607163) lysyl oxidase homolog 3 isofo (753 aa)
initn: 748 init1: 507 opt: 758 Z-score: 403.4 bits: 84.9 E(85289): 9.9e-16
Smith-Waterman score: 758; 54.0% identity (73.8% similar) in 202 aa overlap (371-571:530-729)
350 360 370 380 390 400
pF1KE4 PPGGERNGAQQGRLSVGSVYRPNQNGRGLPDLVPDPNYVQASTYVQRAHLYSLRCAAEEK
::. :: ..:.. :. : :::::.
NP_115 DQCAHHGTHITCKRTGTRFTAGVICSETASDLLLHSALVQETAYIEDRPLHMLYCAAEEN
500 510 520 530 540 550
410 420 430 440 450 460
pF1KE4 CLASTAYAPEATDYDVRVLLRFPQRVKNQGTADFLPNRPRHTWEWHSCHQHYHSMDEFSH
::::.: . . : : :::: ....: : ::: :. ::.: :: :: :::::: :.:
NP_115 CLASSARSANWP-YGHRRLLRFSSQIHNLGRADFRPKAGRHSWVWHECHGHYHSMDIFTH
560 570 580 590 600 610
470 480 490 500 510
pF1KE4 YDLLDAATGKKVAEGHKASFCLEDSTCDFGNLKRYACTSH-TQGLSPGCYDTYNADIDCQ
::.: . .: ::::::::::::::. :. ::: :.. ::.. ::.: : :::::
NP_115 YDIL-TPNGTKVAEGHKASFCLEDTECQEDVSKRYECANFGEQGITVGCWDLYRHDIDCQ
620 630 640 650 660 670
520 530 540 550 560 570
pF1KE4 WIDITDVQPGNYILKVHVNPKYIVLESDFTNNVVRCNIHYTGRYVSATNCKIVQS
:::::::.::::::.: .::.. : :::::::...:: .: :. . . ::.:
NP_115 WIDITDVKPGNYILQVVINPNFEVAESDFTNNAMKCNCKYDGHRIWVHNCHIGDAFSEEA
680 690 700 710 720 730
NP_115 NRRFERYPGQTSNQII
740 750
>>XP_011531436 (OMIM: 607163) PREDICTED: lysyl oxidase h (753 aa)
initn: 748 init1: 507 opt: 758 Z-score: 403.4 bits: 84.9 E(85289): 9.9e-16
Smith-Waterman score: 758; 54.0% identity (73.8% similar) in 202 aa overlap (371-571:530-729)
350 360 370 380 390 400
pF1KE4 PPGGERNGAQQGRLSVGSVYRPNQNGRGLPDLVPDPNYVQASTYVQRAHLYSLRCAAEEK
::. :: ..:.. :. : :::::.
XP_011 DQCAHHGTHITCKRTGTRFTAGVICSETASDLLLHSALVQETAYIEDRPLHMLYCAAEEN
500 510 520 530 540 550
410 420 430 440 450 460
pF1KE4 CLASTAYAPEATDYDVRVLLRFPQRVKNQGTADFLPNRPRHTWEWHSCHQHYHSMDEFSH
::::.: . . : : :::: ....: : ::: :. ::.: :: :: :::::: :.:
XP_011 CLASSARSANWP-YGHRRLLRFSSQIHNLGRADFRPKAGRHSWVWHECHGHYHSMDIFTH
560 570 580 590 600 610
470 480 490 500 510
pF1KE4 YDLLDAATGKKVAEGHKASFCLEDSTCDFGNLKRYACTSH-TQGLSPGCYDTYNADIDCQ
::.: . .: ::::::::::::::. :. ::: :.. ::.. ::.: : :::::
XP_011 YDIL-TPNGTKVAEGHKASFCLEDTECQEDVSKRYECANFGEQGITVGCWDLYRHDIDCQ
620 630 640 650 660 670
520 530 540 550 560 570
pF1KE4 WIDITDVQPGNYILKVHVNPKYIVLESDFTNNVVRCNIHYTGRYVSATNCKIVQS
:::::::.::::::.: .::.. : :::::::...:: .: :. . . ::.:
XP_011 WIDITDVKPGNYILQVVINPNFEVAESDFTNNAMKCNCKYDGHRIWVHNCHIGDAFSEEA
680 690 700 710 720 730
XP_011 NRRFERYPGQTSNQII
740 750
574 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 09:10:49 2016 done: Sun Nov 6 09:10:51 2016
Total Scan time: 12.830 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]