FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6717, 738 aa 1>>>pF1KE6717 738 - 738 aa - 738 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3916+/-0.00104; mu= 14.5963+/- 0.062 mean_var=80.4032+/-15.766, 0's: 0 Z-trim(104.4): 21 B-trim: 0 in 0/52 Lambda= 0.143033 statistics sampled from 7855 (7862) to 7855 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.605), E-opt: 0.2 (0.242), width: 16 Scan time: 3.270 The best scores are: opt bits E(32554) CCDS1584.1 COG2 gene_id:22796|Hs108|chr1 ( 738) 4765 993.5 0 CCDS44329.1 COG2 gene_id:22796|Hs108|chr1 ( 737) 4748 990.0 0 >>CCDS1584.1 COG2 gene_id:22796|Hs108|chr1 (738 aa) initn: 4765 init1: 4765 opt: 4765 Z-score: 5311.8 bits: 993.5 E(32554): 0 Smith-Waterman score: 4765; 100.0% identity (100.0% similar) in 738 aa overlap (1-738:1-738) 10 20 30 40 50 60 pF1KE6 MEKSRMNLPKGPDTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 MEKSRMNLPKGPDTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 VELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 VELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 EDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSKETSALEASSPLLTGQILERIATEFNQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 EDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSKETSALEASSPLLTGQILERIATEFNQL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 QFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 QFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKT 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 RDAEALVGQVLVKPYIDEVIIEQFVESHPNGLQVMYNKLLEFVPHHCRLLREVTGGAISS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 RDAEALVGQVLVKPYIDEVIIEQFVESHPNGLQVMYNKLLEFVPHHCRLLREVTGGAISS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 EKGNTVPGYDFLVNSVWPQIVQGLEEKLPSLFNPGNPDAFHEKYTISMDFVRRLERQCGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 EKGNTVPGYDFLVNSVWPQIVQGLEEKLPSLFNPGNPDAFHEKYTISMDFVRRLERQCGS 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 QASVKRLRAHPAYHSFNKKWNLPVYFQIRFREIAGSLEAALTDVLEDAPAESPYCLLASH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 QASVKRLRAHPAYHSFNKKWNLPVYFQIRFREIAGSLEAALTDVLEDAPAESPYCLLASH 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE6 RTWSSLRRCWSDEMFLPLLVHRLWRLTLQILARYSVFVNELSLRPISNESPKEIKKPLVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 RTWSSLRRCWSDEMFLPLLVHRLWRLTLQILARYSVFVNELSLRPISNESPKEIKKPLVT 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE6 GSKEPSITQGNTEDQGSGPSETKPVVSISRTQLVYVVADLDKLQEQLPELLEIIKPKLEM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 GSKEPSITQGNTEDQGSGPSETKPVVSISRTQLVYVVADLDKLQEQLPELLEIIKPKLEM 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE6 IGFKNFSSISAALEDSQSSFSACVPSLSSKIIQDLSDSCFGFLKSALEVPRLYRRTNKEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 IGFKNFSSISAALEDSQSSFSACVPSLSSKIIQDLSDSCFGFLKSALEVPRLYRRTNKEV 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE6 PTTASSYVDSALKPLFQLQSGHKDKLKQAIIQQWLEGTLSESTHKYYETVSDVLNSVKKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 PTTASSYVDSALKPLFQLQSGHKDKLKQAIIQQWLEGTLSESTHKYYETVSDVLNSVKKM 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE6 EESLKRLKQARKTTPANPVGPSGGMSDDDKIRLQLALDVEYLGEQIQKLGLQASDIKSFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 EESLKRLKQARKTTPANPVGPSGGMSDDDKIRLQLALDVEYLGEQIQKLGLQASDIKSFS 670 680 690 700 710 720 730 pF1KE6 ALAELVAAAKDQATAEQP :::::::::::::::::: CCDS15 ALAELVAAAKDQATAEQP 730 >>CCDS44329.1 COG2 gene_id:22796|Hs108|chr1 (737 aa) initn: 3587 init1: 3587 opt: 4748 Z-score: 5292.8 bits: 990.0 E(32554): 0 Smith-Waterman score: 4748; 99.9% identity (99.9% similar) in 738 aa overlap (1-738:1-737) 10 20 30 40 50 60 pF1KE6 MEKSRMNLPKGPDTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 MEKSRMNLPKGPDTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 VELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 VELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 EDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSKETSALEASSPLLTGQILERIATEFNQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 EDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSKETSALEASSPLLTGQILERIATEFNQL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 QFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 QFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKT 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 RDAEALVGQVLVKPYIDEVIIEQFVESHPNGLQVMYNKLLEFVPHHCRLLREVTGGAISS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 RDAEALVGQVLVKPYIDEVIIEQFVESHPNGLQVMYNKLLEFVPHHCRLLREVTGGAISS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 EKGNTVPGYDFLVNSVWPQIVQGLEEKLPSLFNPGNPDAFHEKYTISMDFVRRLERQCGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 EKGNTVPGYDFLVNSVWPQIVQGLEEKLPSLFNPGNPDAFHEKYTISMDFVRRLERQCGS 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 QASVKRLRAHPAYHSFNKKWNLPVYFQIRFREIAGSLEAALTDVLEDAPAESPYCLLASH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 QASVKRLRAHPAYHSFNKKWNLPVYFQIRFREIAGSLEAALTDVLEDAPAESPYCLLASH 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE6 RTWSSLRRCWSDEMFLPLLVHRLWRLTLQILARYSVFVNELSLRPISNESPKEIKKPLVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 RTWSSLRRCWSDEMFLPLLVHRLWRLTLQILARYSVFVNELSLRPISNESPKEIKKPLVT 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE6 GSKEPSITQGNTEDQGSGPSETKPVVSISRTQLVYVVADLDKLQEQLPELLEIIKPKLEM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 GSKEPSITQGNTEDQGSGPSETKPVVSISRTQLVYVVADLDKLQEQLPELLEIIKPKLEM 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE6 IGFKNFSSISAALEDSQSSFSACVPSLSSKIIQDLSDSCFGFLKSALEVPRLYRRTNKEV ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 IGFKNFSSISA-LEDSQSSFSACVPSLSSKIIQDLSDSCFGFLKSALEVPRLYRRTNKEV 550 560 570 580 590 610 620 630 640 650 660 pF1KE6 PTTASSYVDSALKPLFQLQSGHKDKLKQAIIQQWLEGTLSESTHKYYETVSDVLNSVKKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 PTTASSYVDSALKPLFQLQSGHKDKLKQAIIQQWLEGTLSESTHKYYETVSDVLNSVKKM 600 610 620 630 640 650 670 680 690 700 710 720 pF1KE6 EESLKRLKQARKTTPANPVGPSGGMSDDDKIRLQLALDVEYLGEQIQKLGLQASDIKSFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 EESLKRLKQARKTTPANPVGPSGGMSDDDKIRLQLALDVEYLGEQIQKLGLQASDIKSFS 660 670 680 690 700 710 730 pF1KE6 ALAELVAAAKDQATAEQP :::::::::::::::::: CCDS44 ALAELVAAAKDQATAEQP 720 730 738 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 15:40:19 2016 done: Tue Nov 8 15:40:20 2016 Total Scan time: 3.270 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]