FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6212, 238 aa 1>>>pF1KE6212 238 - 238 aa - 238 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2615+/-0.000764; mu= 13.9822+/- 0.046 mean_var=58.7500+/-11.813, 0's: 0 Z-trim(107.2): 28 B-trim: 388 in 2/49 Lambda= 0.167329 statistics sampled from 9414 (9440) to 9414 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.682), E-opt: 0.2 (0.29), width: 16 Scan time: 1.540 The best scores are: opt bits E(32554) CCDS13248.1 PROCR gene_id:10544|Hs108|chr20 ( 238) 1592 392.4 1.4e-109 >>CCDS13248.1 PROCR gene_id:10544|Hs108|chr20 (238 aa) initn: 1592 init1: 1592 opt: 1592 Z-score: 2080.9 bits: 392.4 E(32554): 1.4e-109 Smith-Waterman score: 1592; 99.6% identity (100.0% similar) in 238 aa overlap (1-238:1-238) 10 20 30 40 50 60 pF1KE6 MLTTLLPILLLSGWAFCSQDASDGLQRLHMLQISYFRDPYHVWYQGNASLGGHLTHVLEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MLTTLLPILLLSGWAFCSQDASDGLQRLHMLQISYFRDPYHVWYQGNASLGGHLTHVLEG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 PDTNTTIIQLQPLQEPESWARTQSGLQSYLLQFHGLVRLVHQERTLAFPLTIRCFLGCEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 PDTNTTIIQLQPLQEPESWARTQSGLQSYLLQFHGLVRLVHQERTLAFPLTIRCFLGCEL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 PPEGSRAHVFFEVAVNGSSFVSFRPERALWQADTQVTSGVVTFTLQQLNAYNRTRYELRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 PPEGSRAHVFFEVAVNGSSFVSFRPERALWQADTQVTSGVVTFTLQQLNAYNRTRYELRE 130 140 150 160 170 180 190 200 210 220 230 pF1KE6 FLEDTCVQYVQKHISAENTKGSQTSRSYTSLVLGVLVGGFIIAGVAVGIFLCTGGRRC ::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: CCDS13 FLEDTCVQYVQKHISAENTKGSQTSRSYTSLVLGVLVGSFIIAGVAVGIFLCTGGRRC 190 200 210 220 230 238 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 11:08:04 2016 done: Tue Nov 8 11:08:04 2016 Total Scan time: 1.540 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]