FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3943, 374 aa 1>>>pF1KE3943 374 - 374 aa - 374 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6469+/-0.000767; mu= 15.1858+/- 0.046 mean_var=81.4181+/-16.403, 0's: 0 Z-trim(108.9): 20 B-trim: 0 in 0/51 Lambda= 0.142139 statistics sampled from 10526 (10540) to 10526 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.695), E-opt: 0.2 (0.324), width: 16 Scan time: 3.110 The best scores are: opt bits E(32554) CCDS10831.1 FBXL8 gene_id:55336|Hs108|chr16 ( 374) 2500 522.2 2.8e-148 >>CCDS10831.1 FBXL8 gene_id:55336|Hs108|chr16 (374 aa) initn: 2500 init1: 2500 opt: 2500 Z-score: 2775.5 bits: 522.2 E(32554): 2.8e-148 Smith-Waterman score: 2500; 100.0% identity (100.0% similar) in 374 aa overlap (1-374:1-374) 10 20 30 40 50 60 pF1KE3 MAEPGEGLPEEVLALIFRHLSLRDRAAAARVCRAWAAAATCSAVWHDTKISCECELEGML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MAEPGEGLPEEVLALIFRHLSLRDRAAAARVCRAWAAAATCSAVWHDTKISCECELEGML 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 PPYLSACLDHIHNLRLEFEPSRKPSRRAAIELLMVLAGRAPGLRGLRLECRGEKPLFDAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 PPYLSACLDHIHNLRLEFEPSRKPSRRAAIELLMVLAGRAPGLRGLRLECRGEKPLFDAG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 RDVLEAVHAVCGAASQLRHLDLRRLSFTLDDALVLQAARSCPELHSLFLDNSTLVGSVGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 RDVLEAVHAVCGAASQLRHLDLRRLSFTLDDALVLQAARSCPELHSLFLDNSTLVGSVGP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 GSVLELLEACPRLRALGLHLASLSHAILEALAAPDRAPFALLALRCACPEDARASPLPNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 GSVLELLEACPRLRALGLHLASLSHAILEALAAPDRAPFALLALRCACPEDARASPLPNE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 AWVALRRRHPGLAVELELEPALPAESVTRVLQPAVPVAALRLNLSGDTVGPVRFAAHHYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 AWVALRRRHPGLAVELELEPALPAESVTRVLQPAVPVAALRLNLSGDTVGPVRFAAHHYA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 ATLCALEVRAAASAELNAALEELAARCAALREVHCFCVVSHSVLDAFRAHCPRLRTYTLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 ATLCALEVRAAASAELNAALEELAARCAALREVHCFCVVSHSVLDAFRAHCPRLRTYTLK 310 320 330 340 350 360 370 pF1KE3 LTREPHPWRPTLVA :::::::::::::: CCDS10 LTREPHPWRPTLVA 370 374 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 08:43:41 2016 done: Sun Nov 6 08:43:41 2016 Total Scan time: 3.110 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]