FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE5522, 357 aa
  1>>>pF1KE5522 357 - 357 aa - 357 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.8403+/-0.00112; mu= 13.3161+/- 0.067
 mean_var=69.8833+/-14.050, 0's: 0 Z-trim(103.1): 17  B-trim: 184 in 1/48
 Lambda= 0.153422
 statistics sampled from 7250 (7253) to 7250 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.589), E-opt: 0.2 (0.223), width:  16
 Scan time:  2.400

The best scores are:                                      opt bits E(32554)
CCDS8118.1 FIBP gene_id:9158|Hs108|chr11           ( 357) 2360 531.8 3.4e-151
CCDS8119.1 FIBP gene_id:9158|Hs108|chr11           ( 364) 2336 526.5 1.4e-149


>>CCDS8118.1 FIBP gene_id:9158|Hs108|chr11                (357 aa)
 initn: 2360 init1: 2360 opt: 2360  Z-score: 2827.8  bits: 531.8 E(32554): 3.4e-151
Smith-Waterman score: 2360; 100.0% identity (100.0% similar) in 357 aa overlap (1-357:1-357)

               10        20        30        40        50        60
pF1KE5 MTSELDIFVGNTTLIDEDVYRLWLDGYSVTDAVALRVRSGILEQTGATAAVLQSDTMDHY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 MTSELDIFVGNTTLIDEDVYRLWLDGYSVTDAVALRVRSGILEQTGATAAVLQSDTMDHY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 RTFHMLERLLHAPPKLLHQLIFQIPPSRQALLIERYYAFDEAFVREVLGKKLSKGTKKDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 RTFHMLERLLHAPPKLLHQLIFQIPPSRQALLIERYYAFDEAFVREVLGKKLSKGTKKDL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE5 DDISTKTGITLKSCRRQFDNFKRVFKVVEEMRGSLVDNIQQHFLLSDRLARDYAAIVFFA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 DDISTKTGITLKSCRRQFDNFKRVFKVVEEMRGSLVDNIQQHFLLSDRLARDYAAIVFFA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE5 NNRFETGKKKLQYLSFGDFAFCAELMIQNWTLGAVDSQMDDMDMDLDKEFLQDLKELKVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 NNRFETGKKKLQYLSFGDFAFCAELMIQNWTLGAVDSQMDDMDMDLDKEFLQDLKELKVL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE5 VADKDLLDLHKSLVCTALRGKLGVFSEMEANFKNLSRGLVNVAAKLTHNKDVRDLFVDLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 VADKDLLDLHKSLVCTALRGKLGVFSEMEANFKNLSRGLVNVAAKLTHNKDVRDLFVDLV
              250       260       270       280       290       300

              310       320       330       340       350       
pF1KE5 EKFVEPCRSDHWPLSDVRFFLNQYSASVHSLDGFRHQALWDRYMGTLRGCLLRLYHD
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 EKFVEPCRSDHWPLSDVRFFLNQYSASVHSLDGFRHQALWDRYMGTLRGCLLRLYHD
              310       320       330       340       350       

>>CCDS8119.1 FIBP gene_id:9158|Hs108|chr11                (364 aa)
 initn: 1436 init1: 1414 opt: 2336  Z-score: 2799.0  bits: 526.5 E(32554): 1.4e-149
Smith-Waterman score: 2336; 98.1% identity (98.1% similar) in 364 aa overlap (1-357:1-364)

               10        20        30        40        50        60
pF1KE5 MTSELDIFVGNTTLIDEDVYRLWLDGYSVTDAVALRVRSGILEQTGATAAVLQSDTMDHY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 MTSELDIFVGNTTLIDEDVYRLWLDGYSVTDAVALRVRSGILEQTGATAAVLQSDTMDHY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 RTFHMLERLLHAPPKLLHQLIFQIPPSRQALLIERYYAFDEAFVREVLGKKLSKGTKKDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 RTFHMLERLLHAPPKLLHQLIFQIPPSRQALLIERYYAFDEAFVREVLGKKLSKGTKKDL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE5 DDISTKTGITLKSCRRQFDNFKRVFKVVEEMRGSLVDNIQQHFLLSDRLARDYAAIVFFA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 DDISTKTGITLKSCRRQFDNFKRVFKVVEEMRGSLVDNIQQHFLLSDRLARDYAAIVFFA
              130       140       150       160       170       180

              190       200       210              220       230   
pF1KE5 NNRFETGKKKLQYLSFGDFAFCAELMIQNWTLGAV-------DSQMDDMDMDLDKEFLQD
       :::::::::::::::::::::::::::::::::::       ::::::::::::::::::
CCDS81 NNRFETGKKKLQYLSFGDFAFCAELMIQNWTLGAVGEAPTDPDSQMDDMDMDLDKEFLQD
              190       200       210       220       230       240

           240       250       260       270       280       290   
pF1KE5 LKELKVLVADKDLLDLHKSLVCTALRGKLGVFSEMEANFKNLSRGLVNVAAKLTHNKDVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 LKELKVLVADKDLLDLHKSLVCTALRGKLGVFSEMEANFKNLSRGLVNVAAKLTHNKDVR
              250       260       270       280       290       300

           300       310       320       330       340       350   
pF1KE5 DLFVDLVEKFVEPCRSDHWPLSDVRFFLNQYSASVHSLDGFRHQALWDRYMGTLRGCLLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 DLFVDLVEKFVEPCRSDHWPLSDVRFFLNQYSASVHSLDGFRHQALWDRYMGTLRGCLLR
              310       320       330       340       350       360

           
pF1KE5 LYHD
       ::::
CCDS81 LYHD
           




357 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 01:27:43 2016 done: Tue Nov  8 01:27:43 2016
 Total Scan time:  2.400 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]