Result of FASTA (omim) for
pFN21AE1053
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1053, 376 aa
1>>>pF1KE1053 376 - 376 aa - 376 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.3287+/-0.00039; mu= 5.8346+/- 0.024
mean_var=295.9027+/-61.257, 0's: 0 Z-trim(122.5): 2001 B-trim: 152 in 1/53
Lambda= 0.074559
statistics sampled from 38506 (40729) to 38506 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.785), E-opt: 0.2 (0.478), width: 16
Scan time: 8.930
The best scores are: opt bits E(85289)
NP_612474 (OMIM: 165280) zinc finger protein GLI4 ( 376) 2714 305.0 1.8e-82
XP_016868071 (OMIM: 194510) PREDICTED: zinc finger ( 410) 1009 121.6 3.2e-27
XP_006716174 (OMIM: 194510) PREDICTED: zinc finger ( 410) 1009 121.6 3.2e-27
NP_001265221 (OMIM: 194510) zinc finger protein 3 ( 410) 1009 121.6 3.2e-27
XP_016868072 (OMIM: 194510) PREDICTED: zinc finger ( 410) 1009 121.6 3.2e-27
NP_001265220 (OMIM: 194510) zinc finger protein 3 ( 410) 1009 121.6 3.2e-27
NP_001265216 (OMIM: 194510) zinc finger protein 3 ( 446) 1009 121.7 3.3e-27
NP_001265213 (OMIM: 194510) zinc finger protein 3 ( 446) 1009 121.7 3.3e-27
NP_001305064 (OMIM: 194510) zinc finger protein 3 ( 446) 1009 121.7 3.3e-27
NP_116313 (OMIM: 194510) zinc finger protein 3 iso ( 446) 1009 121.7 3.3e-27
NP_001265219 (OMIM: 194510) zinc finger protein 3 ( 446) 1009 121.7 3.3e-27
NP_001305065 (OMIM: 194510) zinc finger protein 3 ( 453) 1009 121.7 3.4e-27
NP_001276331 (OMIM: 604077) zinc finger protein 13 ( 616) 993 120.2 1.3e-26
XP_016882731 (OMIM: 604077) PREDICTED: zinc finger ( 621) 993 120.2 1.3e-26
XP_016882730 (OMIM: 604077) PREDICTED: zinc finger ( 628) 993 120.2 1.4e-26
NP_001276330 (OMIM: 604077) zinc finger protein 13 ( 658) 993 120.2 1.4e-26
XP_016882729 (OMIM: 604077) PREDICTED: zinc finger ( 658) 993 120.2 1.4e-26
XP_005259268 (OMIM: 604077) PREDICTED: zinc finger ( 670) 993 120.2 1.4e-26
XP_006723425 (OMIM: 604077) PREDICTED: zinc finger ( 670) 993 120.2 1.4e-26
NP_003427 (OMIM: 604077) zinc finger protein 135 i ( 670) 993 120.2 1.4e-26
XP_006723426 (OMIM: 604077) PREDICTED: zinc finger ( 670) 993 120.2 1.4e-26
NP_009065 (OMIM: 604077) zinc finger protein 135 i ( 682) 993 120.2 1.4e-26
XP_016869365 (OMIM: 194526) PREDICTED: zinc finger ( 499) 972 117.8 5.6e-26
XP_011515622 (OMIM: 194526) PREDICTED: zinc finger ( 499) 972 117.8 5.6e-26
XP_016882740 (OMIM: 606740) PREDICTED: zinc finger ( 349) 969 117.3 5.6e-26
XP_016882741 (OMIM: 606740) PREDICTED: zinc finger ( 349) 969 117.3 5.6e-26
XP_016882745 (OMIM: 606740) PREDICTED: zinc finger ( 349) 969 117.3 5.6e-26
XP_016882744 (OMIM: 606740) PREDICTED: zinc finger ( 349) 969 117.3 5.6e-26
NP_001275689 (OMIM: 606740) zinc finger protein 18 ( 349) 969 117.3 5.6e-26
XP_016882739 (OMIM: 606740) PREDICTED: zinc finger ( 349) 969 117.3 5.6e-26
NP_001275691 (OMIM: 606740) zinc finger protein 18 ( 349) 969 117.3 5.6e-26
NP_001275690 (OMIM: 606740) zinc finger protein 18 ( 349) 969 117.3 5.6e-26
XP_016882743 (OMIM: 606740) PREDICTED: zinc finger ( 349) 969 117.3 5.6e-26
XP_016882742 (OMIM: 606740) PREDICTED: zinc finger ( 349) 969 117.3 5.6e-26
NP_001273699 (OMIM: 194526) zinc finger protein 34 ( 520) 972 117.8 5.8e-26
XP_011515620 (OMIM: 194526) PREDICTED: zinc finger ( 539) 972 117.8 5.9e-26
XP_011515617 (OMIM: 194526) PREDICTED: zinc finger ( 539) 972 117.8 5.9e-26
XP_011515618 (OMIM: 194526) PREDICTED: zinc finger ( 539) 972 117.8 5.9e-26
NP_001273698 (OMIM: 194526) zinc finger protein 34 ( 539) 972 117.8 5.9e-26
XP_016869364 (OMIM: 194526) PREDICTED: zinc finger ( 539) 972 117.8 5.9e-26
XP_016869363 (OMIM: 194526) PREDICTED: zinc finger ( 560) 972 117.8 6e-26
NP_085057 (OMIM: 194526) zinc finger protein 34 is ( 560) 972 117.8 6e-26
XP_016869362 (OMIM: 194526) PREDICTED: zinc finger ( 560) 972 117.8 6e-26
XP_011515616 (OMIM: 194526) PREDICTED: zinc finger ( 560) 972 117.8 6e-26
XP_016869361 (OMIM: 194526) PREDICTED: zinc finger ( 560) 972 117.8 6e-26
NP_001278562 (OMIM: 606740) zinc finger protein 18 ( 665) 969 117.6 8.4e-26
NP_001265438 (OMIM: 606740) zinc finger protein 18 ( 665) 969 117.6 8.4e-26
NP_001265437 (OMIM: 606740) zinc finger protein 18 ( 667) 969 117.6 8.4e-26
NP_001275688 (OMIM: 606740) zinc finger protein 18 ( 691) 969 117.6 8.6e-26
NP_037388 (OMIM: 606740) zinc finger protein 180 i ( 692) 969 117.6 8.6e-26
>>NP_612474 (OMIM: 165280) zinc finger protein GLI4 [Hom (376 aa)
initn: 2714 init1: 2714 opt: 2714 Z-score: 1601.4 bits: 305.0 E(85289): 1.8e-82
Smith-Waterman score: 2714; 100.0% identity (100.0% similar) in 376 aa overlap (1-376:1-376)
10 20 30 40 50 60
pF1KE1 MAALGDIQESPSVPSPVSLSSPGTPGTQHHEPQLHLHGHQHGSPGSSPKVLSQPSDLDLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_612 MAALGDIQESPSVPSPVSLSSPGTPGTQHHEPQLHLHGHQHGSPGSSPKVLSQPSDLDLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 DVEEVEIGRDTFWPDSEPKPEQAPRSPGSQAPDEGAGGALRSLLRSLPRRARCSAGFGPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_612 DVEEVEIGRDTFWPDSEPKPEQAPRSPGSQAPDEGAGGALRSLLRSLPRRARCSAGFGPE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 SSAERPAGQPPGAVPCAQPRGAWRVTLVQQAAAGPEGAPERAAELGVNFGRSRQGSARGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_612 SSAERPAGQPPGAVPCAQPRGAWRVTLVQQAAAGPEGAPERAAELGVNFGRSRQGSARGA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 KPHRCEACGKSFKYNSLLLKHQRIHTGEKPYACHECGKRFRGWSGFIQHHRIHTGEKPYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_612 KPHRCEACGKSFKYNSLLLKHQRIHTGEKPYACHECGKRFRGWSGFIQHHRIHTGEKPYE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 CGQCGRAFSHSSHFTQHLRIHNGEKPYKCGECGQAFSQSSNLVRHQRLHTGEKPYACSQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_612 CGQCGRAFSHSSHFTQHLRIHNGEKPYKCGECGQAFSQSSNLVRHQRLHTGEKPYACSQC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 GKAFIWSSVLIEHQRIHTGEKPYECSDCGKAFRGRSHFFRHLRTHTGEKPFACGACGKAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_612 GKAFIWSSVLIEHQRIHTGEKPYECSDCGKAFRGRSHFFRHLRTHTGEKPFACGACGKAF
310 320 330 340 350 360
370
pF1KE1 GQSSQLIQHQRVHYRE
::::::::::::::::
NP_612 GQSSQLIQHQRVHYRE
370
>>XP_016868071 (OMIM: 194510) PREDICTED: zinc finger pro (410 aa)
initn: 4339 init1: 965 opt: 1009 Z-score: 609.8 bits: 121.6 E(85289): 3.2e-27
Smith-Waterman score: 1009; 47.6% identity (69.6% similar) in 332 aa overlap (53-376:33-357)
30 40 50 60 70 80
pF1KE1 GTPGTQHHEPQLHLHGHQHGSPGSSPKVLSQPSDLDL-QDVEEVEIGRDTFWPDSEPKPE
.:.. :: .:: . : ..: : : . :
XP_016 AAALLKAKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYG-NVFSLDRETRTE
10 20 30 40 50 60
90 100 110 120 130 140
pF1KE1 QAPRSPGSQAPDEGAGGALRS-LLRSLPRRARCSAGFGPESSAERPAGQPPGAVPCAQPR
. . . : . :.: . . ... . . . .. : : .:: :. :: .
XP_016 NDQEI----SEDTRSHGVLLGRFQKDISQGLKFKEAYEREVSLKRPLGNSPGERLNRKMP
70 80 90 100 110
150 160 170 180 190
pF1KE1 GAWRVTLVQQAAAGPEGA-PERAAELGVNFGR-----SRQGSARGAKPHRCEACGKSFKY
.::. .. . :.: :. ..: .: :.: : .::.:. :.:::.
XP_016 DFGQVTVEEKLT--PRGERSEKYNDFGNSFTVNSNLISHQRLPVGDRPHKCDECSKSFNR
120 130 140 150 160 170
200 210 220 230 240 250
pF1KE1 NSLLLKHQRIHTGEKPYACHECGKRFRGWSGFIQHHRIHTGEKPYECGQCGRAFSHSSHF
.: :..::::::::::: :.:::: : : .:::.:::::::::::..::..:: :: .
XP_016 TSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTGEKPYECSDCGKTFSCSSAL
180 190 200 210 220 230
260 270 280 290 300 310
pF1KE1 TQHLRIHNGEKPYKCGECGQAFSQSSNLVRHQRLHTGEKPYACSQCGKAFIWSSVLIEHQ
: :::.:::::.:.:::..:: ::.:..:::.:::::::::..::::: ::.::.::
XP_016 ILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHHQ
240 250 260 270 280 290
320 330 340 350 360 370
pF1KE1 RIHTGEKPYECSDCGKAFRGRSHFFRHLRTHTGEKPFACGACGKAFGQSSQLIQHQRVHY
:::::::::::..::::: ::...: : ::::::. : :: : :: ::::::.:
XP_016 RIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHT
300 310 320 330 340 350
pF1KE1 RE
:
XP_016 GENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSLRVTTELNIREST
360 370 380 390 400 410
>>XP_006716174 (OMIM: 194510) PREDICTED: zinc finger pro (410 aa)
initn: 4339 init1: 965 opt: 1009 Z-score: 609.8 bits: 121.6 E(85289): 3.2e-27
Smith-Waterman score: 1009; 47.6% identity (69.6% similar) in 332 aa overlap (53-376:33-357)
30 40 50 60 70 80
pF1KE1 GTPGTQHHEPQLHLHGHQHGSPGSSPKVLSQPSDLDL-QDVEEVEIGRDTFWPDSEPKPE
.:.. :: .:: . : ..: : : . :
XP_006 AAALLKAKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYG-NVFSLDRETRTE
10 20 30 40 50 60
90 100 110 120 130 140
pF1KE1 QAPRSPGSQAPDEGAGGALRS-LLRSLPRRARCSAGFGPESSAERPAGQPPGAVPCAQPR
. . . : . :.: . . ... . . . .. : : .:: :. :: .
XP_006 NDQEI----SEDTRSHGVLLGRFQKDISQGLKFKEAYEREVSLKRPLGNSPGERLNRKMP
70 80 90 100 110
150 160 170 180 190
pF1KE1 GAWRVTLVQQAAAGPEGA-PERAAELGVNFGR-----SRQGSARGAKPHRCEACGKSFKY
.::. .. . :.: :. ..: .: :.: : .::.:. :.:::.
XP_006 DFGQVTVEEKLT--PRGERSEKYNDFGNSFTVNSNLISHQRLPVGDRPHKCDECSKSFNR
120 130 140 150 160 170
200 210 220 230 240 250
pF1KE1 NSLLLKHQRIHTGEKPYACHECGKRFRGWSGFIQHHRIHTGEKPYECGQCGRAFSHSSHF
.: :..::::::::::: :.:::: : : .:::.:::::::::::..::..:: :: .
XP_006 TSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTGEKPYECSDCGKTFSCSSAL
180 190 200 210 220 230
260 270 280 290 300 310
pF1KE1 TQHLRIHNGEKPYKCGECGQAFSQSSNLVRHQRLHTGEKPYACSQCGKAFIWSSVLIEHQ
: :::.:::::.:.:::..:: ::.:..:::.:::::::::..::::: ::.::.::
XP_006 ILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHHQ
240 250 260 270 280 290
320 330 340 350 360 370
pF1KE1 RIHTGEKPYECSDCGKAFRGRSHFFRHLRTHTGEKPFACGACGKAFGQSSQLIQHQRVHY
:::::::::::..::::: ::...: : ::::::. : :: : :: ::::::.:
XP_006 RIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHT
300 310 320 330 340 350
pF1KE1 RE
:
XP_006 GENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSLRVTTELNIREST
360 370 380 390 400 410
>>NP_001265221 (OMIM: 194510) zinc finger protein 3 isof (410 aa)
initn: 4339 init1: 965 opt: 1009 Z-score: 609.8 bits: 121.6 E(85289): 3.2e-27
Smith-Waterman score: 1009; 47.6% identity (69.6% similar) in 332 aa overlap (53-376:33-357)
30 40 50 60 70 80
pF1KE1 GTPGTQHHEPQLHLHGHQHGSPGSSPKVLSQPSDLDL-QDVEEVEIGRDTFWPDSEPKPE
.:.. :: .:: . : ..: : : . :
NP_001 AAALLKAKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYG-NVFSLDRETRTE
10 20 30 40 50 60
90 100 110 120 130 140
pF1KE1 QAPRSPGSQAPDEGAGGALRS-LLRSLPRRARCSAGFGPESSAERPAGQPPGAVPCAQPR
. . . : . :.: . . ... . . . .. : : .:: :. :: .
NP_001 NDQEI----SEDTRSHGVLLGRFQKDISQGLKFKEAYEREVSLKRPLGNSPGERLNRKMP
70 80 90 100 110
150 160 170 180 190
pF1KE1 GAWRVTLVQQAAAGPEGA-PERAAELGVNFGR-----SRQGSARGAKPHRCEACGKSFKY
.::. .. . :.: :. ..: .: :.: : .::.:. :.:::.
NP_001 DFGQVTVEEKLT--PRGERSEKYNDFGNSFTVNSNLISHQRLPVGDRPHKCDECSKSFNR
120 130 140 150 160 170
200 210 220 230 240 250
pF1KE1 NSLLLKHQRIHTGEKPYACHECGKRFRGWSGFIQHHRIHTGEKPYECGQCGRAFSHSSHF
.: :..::::::::::: :.:::: : : .:::.:::::::::::..::..:: :: .
NP_001 TSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTGEKPYECSDCGKTFSCSSAL
180 190 200 210 220 230
260 270 280 290 300 310
pF1KE1 TQHLRIHNGEKPYKCGECGQAFSQSSNLVRHQRLHTGEKPYACSQCGKAFIWSSVLIEHQ
: :::.:::::.:.:::..:: ::.:..:::.:::::::::..::::: ::.::.::
NP_001 ILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHHQ
240 250 260 270 280 290
320 330 340 350 360 370
pF1KE1 RIHTGEKPYECSDCGKAFRGRSHFFRHLRTHTGEKPFACGACGKAFGQSSQLIQHQRVHY
:::::::::::..::::: ::...: : ::::::. : :: : :: ::::::.:
NP_001 RIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHT
300 310 320 330 340 350
pF1KE1 RE
:
NP_001 GENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSLRVTTELNIREST
360 370 380 390 400 410
>>XP_016868072 (OMIM: 194510) PREDICTED: zinc finger pro (410 aa)
initn: 4339 init1: 965 opt: 1009 Z-score: 609.8 bits: 121.6 E(85289): 3.2e-27
Smith-Waterman score: 1009; 47.6% identity (69.6% similar) in 332 aa overlap (53-376:33-357)
30 40 50 60 70 80
pF1KE1 GTPGTQHHEPQLHLHGHQHGSPGSSPKVLSQPSDLDL-QDVEEVEIGRDTFWPDSEPKPE
.:.. :: .:: . : ..: : : . :
XP_016 AAALLKAKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYG-NVFSLDRETRTE
10 20 30 40 50 60
90 100 110 120 130 140
pF1KE1 QAPRSPGSQAPDEGAGGALRS-LLRSLPRRARCSAGFGPESSAERPAGQPPGAVPCAQPR
. . . : . :.: . . ... . . . .. : : .:: :. :: .
XP_016 NDQEI----SEDTRSHGVLLGRFQKDISQGLKFKEAYEREVSLKRPLGNSPGERLNRKMP
70 80 90 100 110
150 160 170 180 190
pF1KE1 GAWRVTLVQQAAAGPEGA-PERAAELGVNFGR-----SRQGSARGAKPHRCEACGKSFKY
.::. .. . :.: :. ..: .: :.: : .::.:. :.:::.
XP_016 DFGQVTVEEKLT--PRGERSEKYNDFGNSFTVNSNLISHQRLPVGDRPHKCDECSKSFNR
120 130 140 150 160 170
200 210 220 230 240 250
pF1KE1 NSLLLKHQRIHTGEKPYACHECGKRFRGWSGFIQHHRIHTGEKPYECGQCGRAFSHSSHF
.: :..::::::::::: :.:::: : : .:::.:::::::::::..::..:: :: .
XP_016 TSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTGEKPYECSDCGKTFSCSSAL
180 190 200 210 220 230
260 270 280 290 300 310
pF1KE1 TQHLRIHNGEKPYKCGECGQAFSQSSNLVRHQRLHTGEKPYACSQCGKAFIWSSVLIEHQ
: :::.:::::.:.:::..:: ::.:..:::.:::::::::..::::: ::.::.::
XP_016 ILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHHQ
240 250 260 270 280 290
320 330 340 350 360 370
pF1KE1 RIHTGEKPYECSDCGKAFRGRSHFFRHLRTHTGEKPFACGACGKAFGQSSQLIQHQRVHY
:::::::::::..::::: ::...: : ::::::. : :: : :: ::::::.:
XP_016 RIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHT
300 310 320 330 340 350
pF1KE1 RE
:
XP_016 GENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSLRVTTELNIREST
360 370 380 390 400 410
>>NP_001265220 (OMIM: 194510) zinc finger protein 3 isof (410 aa)
initn: 4339 init1: 965 opt: 1009 Z-score: 609.8 bits: 121.6 E(85289): 3.2e-27
Smith-Waterman score: 1009; 47.6% identity (69.6% similar) in 332 aa overlap (53-376:33-357)
30 40 50 60 70 80
pF1KE1 GTPGTQHHEPQLHLHGHQHGSPGSSPKVLSQPSDLDL-QDVEEVEIGRDTFWPDSEPKPE
.:.. :: .:: . : ..: : : . :
NP_001 AAALLKAKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYG-NVFSLDRETRTE
10 20 30 40 50 60
90 100 110 120 130 140
pF1KE1 QAPRSPGSQAPDEGAGGALRS-LLRSLPRRARCSAGFGPESSAERPAGQPPGAVPCAQPR
. . . : . :.: . . ... . . . .. : : .:: :. :: .
NP_001 NDQEI----SEDTRSHGVLLGRFQKDISQGLKFKEAYEREVSLKRPLGNSPGERLNRKMP
70 80 90 100 110
150 160 170 180 190
pF1KE1 GAWRVTLVQQAAAGPEGA-PERAAELGVNFGR-----SRQGSARGAKPHRCEACGKSFKY
.::. .. . :.: :. ..: .: :.: : .::.:. :.:::.
NP_001 DFGQVTVEEKLT--PRGERSEKYNDFGNSFTVNSNLISHQRLPVGDRPHKCDECSKSFNR
120 130 140 150 160 170
200 210 220 230 240 250
pF1KE1 NSLLLKHQRIHTGEKPYACHECGKRFRGWSGFIQHHRIHTGEKPYECGQCGRAFSHSSHF
.: :..::::::::::: :.:::: : : .:::.:::::::::::..::..:: :: .
NP_001 TSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTGEKPYECSDCGKTFSCSSAL
180 190 200 210 220 230
260 270 280 290 300 310
pF1KE1 TQHLRIHNGEKPYKCGECGQAFSQSSNLVRHQRLHTGEKPYACSQCGKAFIWSSVLIEHQ
: :::.:::::.:.:::..:: ::.:..:::.:::::::::..::::: ::.::.::
NP_001 ILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHHQ
240 250 260 270 280 290
320 330 340 350 360 370
pF1KE1 RIHTGEKPYECSDCGKAFRGRSHFFRHLRTHTGEKPFACGACGKAFGQSSQLIQHQRVHY
:::::::::::..::::: ::...: : ::::::. : :: : :: ::::::.:
NP_001 RIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHT
300 310 320 330 340 350
pF1KE1 RE
:
NP_001 GENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSLRVTTELNIREST
360 370 380 390 400 410
>>NP_001265216 (OMIM: 194510) zinc finger protein 3 isof (446 aa)
initn: 4339 init1: 965 opt: 1009 Z-score: 609.4 bits: 121.7 E(85289): 3.3e-27
Smith-Waterman score: 1009; 47.6% identity (69.6% similar) in 332 aa overlap (53-376:69-393)
30 40 50 60 70 80
pF1KE1 GTPGTQHHEPQLHLHGHQHGSPGSSPKVLSQPSDLDL-QDVEEVEIGRDTFWPDSEPKPE
.:.. :: .:: . : ..: : : . :
NP_001 AAALLKAKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYG-NVFSLDRETRTE
40 50 60 70 80 90
90 100 110 120 130 140
pF1KE1 QAPRSPGSQAPDEGAGGALRS-LLRSLPRRARCSAGFGPESSAERPAGQPPGAVPCAQPR
. . . : . :.: . . ... . . . .. : : .:: :. :: .
NP_001 NDQEI----SEDTRSHGVLLGRFQKDISQGLKFKEAYEREVSLKRPLGNSPGERLNRKMP
100 110 120 130 140 150
150 160 170 180 190
pF1KE1 GAWRVTLVQQAAAGPEGA-PERAAELGVNFGR-----SRQGSARGAKPHRCEACGKSFKY
.::. .. . :.: :. ..: .: :.: : .::.:. :.:::.
NP_001 DFGQVTVEEKLT--PRGERSEKYNDFGNSFTVNSNLISHQRLPVGDRPHKCDECSKSFNR
160 170 180 190 200 210
200 210 220 230 240 250
pF1KE1 NSLLLKHQRIHTGEKPYACHECGKRFRGWSGFIQHHRIHTGEKPYECGQCGRAFSHSSHF
.: :..::::::::::: :.:::: : : .:::.:::::::::::..::..:: :: .
NP_001 TSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTGEKPYECSDCGKTFSCSSAL
220 230 240 250 260 270
260 270 280 290 300 310
pF1KE1 TQHLRIHNGEKPYKCGECGQAFSQSSNLVRHQRLHTGEKPYACSQCGKAFIWSSVLIEHQ
: :::.:::::.:.:::..:: ::.:..:::.:::::::::..::::: ::.::.::
NP_001 ILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHHQ
280 290 300 310 320 330
320 330 340 350 360 370
pF1KE1 RIHTGEKPYECSDCGKAFRGRSHFFRHLRTHTGEKPFACGACGKAFGQSSQLIQHQRVHY
:::::::::::..::::: ::...: : ::::::. : :: : :: ::::::.:
NP_001 RIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHT
340 350 360 370 380 390
pF1KE1 RE
:
NP_001 GENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSLRVTTELNIREST
400 410 420 430 440
>>NP_001265213 (OMIM: 194510) zinc finger protein 3 isof (446 aa)
initn: 4339 init1: 965 opt: 1009 Z-score: 609.4 bits: 121.7 E(85289): 3.3e-27
Smith-Waterman score: 1009; 47.6% identity (69.6% similar) in 332 aa overlap (53-376:69-393)
30 40 50 60 70 80
pF1KE1 GTPGTQHHEPQLHLHGHQHGSPGSSPKVLSQPSDLDL-QDVEEVEIGRDTFWPDSEPKPE
.:.. :: .:: . : ..: : : . :
NP_001 AAALLKAKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYG-NVFSLDRETRTE
40 50 60 70 80 90
90 100 110 120 130 140
pF1KE1 QAPRSPGSQAPDEGAGGALRS-LLRSLPRRARCSAGFGPESSAERPAGQPPGAVPCAQPR
. . . : . :.: . . ... . . . .. : : .:: :. :: .
NP_001 NDQEI----SEDTRSHGVLLGRFQKDISQGLKFKEAYEREVSLKRPLGNSPGERLNRKMP
100 110 120 130 140 150
150 160 170 180 190
pF1KE1 GAWRVTLVQQAAAGPEGA-PERAAELGVNFGR-----SRQGSARGAKPHRCEACGKSFKY
.::. .. . :.: :. ..: .: :.: : .::.:. :.:::.
NP_001 DFGQVTVEEKLT--PRGERSEKYNDFGNSFTVNSNLISHQRLPVGDRPHKCDECSKSFNR
160 170 180 190 200 210
200 210 220 230 240 250
pF1KE1 NSLLLKHQRIHTGEKPYACHECGKRFRGWSGFIQHHRIHTGEKPYECGQCGRAFSHSSHF
.: :..::::::::::: :.:::: : : .:::.:::::::::::..::..:: :: .
NP_001 TSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTGEKPYECSDCGKTFSCSSAL
220 230 240 250 260 270
260 270 280 290 300 310
pF1KE1 TQHLRIHNGEKPYKCGECGQAFSQSSNLVRHQRLHTGEKPYACSQCGKAFIWSSVLIEHQ
: :::.:::::.:.:::..:: ::.:..:::.:::::::::..::::: ::.::.::
NP_001 ILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHHQ
280 290 300 310 320 330
320 330 340 350 360 370
pF1KE1 RIHTGEKPYECSDCGKAFRGRSHFFRHLRTHTGEKPFACGACGKAFGQSSQLIQHQRVHY
:::::::::::..::::: ::...: : ::::::. : :: : :: ::::::.:
NP_001 RIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHT
340 350 360 370 380 390
pF1KE1 RE
:
NP_001 GENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSLRVTTELNIREST
400 410 420 430 440
>>NP_001305064 (OMIM: 194510) zinc finger protein 3 isof (446 aa)
initn: 4339 init1: 965 opt: 1009 Z-score: 609.4 bits: 121.7 E(85289): 3.3e-27
Smith-Waterman score: 1009; 47.6% identity (69.6% similar) in 332 aa overlap (53-376:69-393)
30 40 50 60 70 80
pF1KE1 GTPGTQHHEPQLHLHGHQHGSPGSSPKVLSQPSDLDL-QDVEEVEIGRDTFWPDSEPKPE
.:.. :: .:: . : ..: : : . :
NP_001 AAALLKAKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYG-NVFSLDRETRTE
40 50 60 70 80 90
90 100 110 120 130 140
pF1KE1 QAPRSPGSQAPDEGAGGALRS-LLRSLPRRARCSAGFGPESSAERPAGQPPGAVPCAQPR
. . . : . :.: . . ... . . . .. : : .:: :. :: .
NP_001 NDQEI----SEDTRSHGVLLGRFQKDISQGLKFKEAYEREVSLKRPLGNSPGERLNRKMP
100 110 120 130 140 150
150 160 170 180 190
pF1KE1 GAWRVTLVQQAAAGPEGA-PERAAELGVNFGR-----SRQGSARGAKPHRCEACGKSFKY
.::. .. . :.: :. ..: .: :.: : .::.:. :.:::.
NP_001 DFGQVTVEEKLT--PRGERSEKYNDFGNSFTVNSNLISHQRLPVGDRPHKCDECSKSFNR
160 170 180 190 200 210
200 210 220 230 240 250
pF1KE1 NSLLLKHQRIHTGEKPYACHECGKRFRGWSGFIQHHRIHTGEKPYECGQCGRAFSHSSHF
.: :..::::::::::: :.:::: : : .:::.:::::::::::..::..:: :: .
NP_001 TSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTGEKPYECSDCGKTFSCSSAL
220 230 240 250 260 270
260 270 280 290 300 310
pF1KE1 TQHLRIHNGEKPYKCGECGQAFSQSSNLVRHQRLHTGEKPYACSQCGKAFIWSSVLIEHQ
: :::.:::::.:.:::..:: ::.:..:::.:::::::::..::::: ::.::.::
NP_001 ILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHHQ
280 290 300 310 320 330
320 330 340 350 360 370
pF1KE1 RIHTGEKPYECSDCGKAFRGRSHFFRHLRTHTGEKPFACGACGKAFGQSSQLIQHQRVHY
:::::::::::..::::: ::...: : ::::::. : :: : :: ::::::.:
NP_001 RIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHT
340 350 360 370 380 390
pF1KE1 RE
:
NP_001 GENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSLRVTTELNIREST
400 410 420 430 440
>>NP_116313 (OMIM: 194510) zinc finger protein 3 isoform (446 aa)
initn: 4339 init1: 965 opt: 1009 Z-score: 609.4 bits: 121.7 E(85289): 3.3e-27
Smith-Waterman score: 1009; 47.6% identity (69.6% similar) in 332 aa overlap (53-376:69-393)
30 40 50 60 70 80
pF1KE1 GTPGTQHHEPQLHLHGHQHGSPGSSPKVLSQPSDLDL-QDVEEVEIGRDTFWPDSEPKPE
.:.. :: .:: . : ..: : : . :
NP_116 AAALLKAKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYG-NVFSLDRETRTE
40 50 60 70 80 90
90 100 110 120 130 140
pF1KE1 QAPRSPGSQAPDEGAGGALRS-LLRSLPRRARCSAGFGPESSAERPAGQPPGAVPCAQPR
. . . : . :.: . . ... . . . .. : : .:: :. :: .
NP_116 NDQEI----SEDTRSHGVLLGRFQKDISQGLKFKEAYEREVSLKRPLGNSPGERLNRKMP
100 110 120 130 140 150
150 160 170 180 190
pF1KE1 GAWRVTLVQQAAAGPEGA-PERAAELGVNFGR-----SRQGSARGAKPHRCEACGKSFKY
.::. .. . :.: :. ..: .: :.: : .::.:. :.:::.
NP_116 DFGQVTVEEKLT--PRGERSEKYNDFGNSFTVNSNLISHQRLPVGDRPHKCDECSKSFNR
160 170 180 190 200 210
200 210 220 230 240 250
pF1KE1 NSLLLKHQRIHTGEKPYACHECGKRFRGWSGFIQHHRIHTGEKPYECGQCGRAFSHSSHF
.: :..::::::::::: :.:::: : : .:::.:::::::::::..::..:: :: .
NP_116 TSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTGEKPYECSDCGKTFSCSSAL
220 230 240 250 260 270
260 270 280 290 300 310
pF1KE1 TQHLRIHNGEKPYKCGECGQAFSQSSNLVRHQRLHTGEKPYACSQCGKAFIWSSVLIEHQ
: :::.:::::.:.:::..:: ::.:..:::.:::::::::..::::: ::.::.::
NP_116 ILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHHQ
280 290 300 310 320 330
320 330 340 350 360 370
pF1KE1 RIHTGEKPYECSDCGKAFRGRSHFFRHLRTHTGEKPFACGACGKAFGQSSQLIQHQRVHY
:::::::::::..::::: ::...: : ::::::. : :: : :: ::::::.:
NP_116 RIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHT
340 350 360 370 380 390
pF1KE1 RE
:
NP_116 GENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSLRVTTELNIREST
400 410 420 430 440
376 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 01:28:18 2016 done: Mon Nov 7 01:28:20 2016
Total Scan time: 8.930 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]