Result of FASTA (omim) for pFN21AE4549
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE4549, 651 aa
  1>>>pF1KE4549 651 - 651 aa - 651 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.2829+/-0.000421; mu= 19.1120+/- 0.026
 mean_var=64.0130+/-12.759, 0's: 0 Z-trim(110.1): 24  B-trim: 0 in 0/55
 Lambda= 0.160302
 statistics sampled from 18401 (18421) to 18401 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.578), E-opt: 0.2 (0.216), width:  16
 Scan time: 10.180

The best scores are:                                      opt bits E(85289)
NP_000172 (OMIM: 253220,611499) beta-glucuronidase ( 651) 4465 1042.0       0
NP_001280033 (OMIM: 253220,611499) beta-glucuronid ( 461) 3102 726.7 4.4e-209
XP_011514416 (OMIM: 253220,611499) PREDICTED: beta ( 427) 2802 657.3 3.2e-188
XP_011514415 (OMIM: 253220,611499) PREDICTED: beta ( 484) 2802 657.3 3.5e-188
NP_001280034 (OMIM: 253220,611499) beta-glucuronid ( 432) 2793 655.2 1.4e-187
NP_001271219 (OMIM: 253220,611499) beta-glucuronid ( 505) 2377 559.1 1.4e-158
XP_005250354 (OMIM: 253220,611499) PREDICTED: beta ( 600) 2096 494.1  6e-139
XP_016867582 (OMIM: 253220,611499) PREDICTED: beta ( 376) 2050 483.4 6.4e-136
XP_016867581 (OMIM: 253220,611499) PREDICTED: beta ( 410) 2050 483.4 6.9e-136
XP_016867580 (OMIM: 253220,611499) PREDICTED: beta ( 433) 2050 483.4 7.2e-136
XP_016863693 (OMIM: 248510,609489) PREDICTED: beta ( 663)  147 43.4  0.0032
XP_016863692 (OMIM: 248510,609489) PREDICTED: beta ( 758)  147 43.4  0.0035
NP_005899 (OMIM: 248510,609489) beta-mannosidase p ( 879)  147 43.5   0.004


>>NP_000172 (OMIM: 253220,611499) beta-glucuronidase iso  (651 aa)
 initn: 4465 init1: 4465 opt: 4465  Z-score: 5576.0  bits: 1042.0 E(85289):    0
Smith-Waterman score: 4465; 100.0% identity (100.0% similar) in 651 aa overlap (1-651:1-651)

               10        20        30        40        50        60
pF1KE4 MARGSAVAWAALGPLLWGCALGLQGGMLYPQESPSRECKELDGLWSFRADFSDNRRRGFE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MARGSAVAWAALGPLLWGCALGLQGGMLYPQESPSRECKELDGLWSFRADFSDNRRRGFE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE4 EQWYRRPLWESGPTVDMPVPSSFNDISQDWRLRHFVGWVWYEREVILPERWTQDLRTRVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 EQWYRRPLWESGPTVDMPVPSSFNDISQDWRLRHFVGWVWYEREVILPERWTQDLRTRVV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE4 LRIGSAHSYAIVWVNGVDTLEHEGGYLPFEADISNLVQVGPLPSRLRITIAINNTLTPTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LRIGSAHSYAIVWVNGVDTLEHEGGYLPFEADISNLVQVGPLPSRLRITIAINNTLTPTT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE4 LPPGTIQYLTDTSKYPKGYFVQNTYFDFFNYAGLQRSVLLYTTPTTYIDDITVTTSVEQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LPPGTIQYLTDTSKYPKGYFVQNTYFDFFNYAGLQRSVLLYTTPTTYIDDITVTTSVEQD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE4 SGLVNYQISVKGSNLFKLEVRLLDAENKVVANGTGTQGQLKVPGVSLWWPYLMHERPAYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SGLVNYQISVKGSNLFKLEVRLLDAENKVVANGTGTQGQLKVPGVSLWWPYLMHERPAYL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE4 YSLEVQLTAQTSLGPVSDFYTLPVGIRTVAVTKSQFLINGKPFYFHGVNKHEDADIRGKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 YSLEVQLTAQTSLGPVSDFYTLPVGIRTVAVTKSQFLINGKPFYFHGVNKHEDADIRGKG
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE4 FDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVVIDECPGVGLALPQFFNN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 FDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVVIDECPGVGLALPQFFNN
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE4 VSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPASHLESAGYYLKMVIAHTKSLDPSRPVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 VSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPASHLESAGYYLKMVIAHTKSLDPSRPVT
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE4 FVSNSNYAADKGAPYVDVICLNSYYSWYHDYGHLELIQLQLATQFENWYKKYQKPIIQSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 FVSNSNYAADKGAPYVDVICLNSYYSWYHDYGHLELIQLQLATQFENWYKKYQKPIIQSE
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KE4 YGAETIAGFHQDPPLMFTEEYQKSLLEQYHLGLDQKRRKYVVGELIWNFADFMTEQSPTR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 YGAETIAGFHQDPPLMFTEEYQKSLLEQYHLGLDQKRRKYVVGELIWNFADFMTEQSPTR
              550       560       570       580       590       600

              610       620       630       640       650 
pF1KE4 VLGNKKGIFTRQRQPKSAAFLLRERYWKIANETRYPHSVAKSQCLENSLFT
       :::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 VLGNKKGIFTRQRQPKSAAFLLRERYWKIANETRYPHSVAKSQCLENSLFT
              610       620       630       640       650 

>>NP_001280033 (OMIM: 253220,611499) beta-glucuronidase   (461 aa)
 initn: 3102 init1: 3102 opt: 3102  Z-score: 3874.7  bits: 726.7 E(85289): 4.4e-209
Smith-Waterman score: 3102; 99.8% identity (99.8% similar) in 459 aa overlap (193-651:3-461)

            170       180       190       200       210       220  
pF1KE4 PSRLRITIAINNTLTPTTLPPGTIQYLTDTSKYPKGYFVQNTYFDFFNYAGLQRSVLLYT
                                     : ::::::::::::::::::::::::::::
NP_001                             MPSWYPKGYFVQNTYFDFFNYAGLQRSVLLYT
                                           10        20        30  

            230       240       250       260       270       280  
pF1KE4 TPTTYIDDITVTTSVEQDSGLVNYQISVKGSNLFKLEVRLLDAENKVVANGTGTQGQLKV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPTTYIDDITVTTSVEQDSGLVNYQISVKGSNLFKLEVRLLDAENKVVANGTGTQGQLKV
             40        50        60        70        80        90  

            290       300       310       320       330       340  
pF1KE4 PGVSLWWPYLMHERPAYLYSLEVQLTAQTSLGPVSDFYTLPVGIRTVAVTKSQFLINGKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGVSLWWPYLMHERPAYLYSLEVQLTAQTSLGPVSDFYTLPVGIRTVAVTKSQFLINGKP
            100       110       120       130       140       150  

            350       360       370       380       390       400  
pF1KE4 FYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIV
            160       170       180       190       200       210  

            410       420       430       440       450       460  
pF1KE4 VIDECPGVGLALPQFFNNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPASHLESAGYY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VIDECPGVGLALPQFFNNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPASHLESAGYY
            220       230       240       250       260       270  

            470       480       490       500       510       520  
pF1KE4 LKMVIAHTKSLDPSRPVTFVSNSNYAADKGAPYVDVICLNSYYSWYHDYGHLELIQLQLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKMVIAHTKSLDPSRPVTFVSNSNYAADKGAPYVDVICLNSYYSWYHDYGHLELIQLQLA
            280       290       300       310       320       330  

            530       540       550       560       570       580  
pF1KE4 TQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQKSLLEQYHLGLDQKRRKYVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQKSLLEQYHLGLDQKRRKYVV
            340       350       360       370       380       390  

            590       600       610       620       630       640  
pF1KE4 GELIWNFADFMTEQSPTRVLGNKKGIFTRQRQPKSAAFLLRERYWKIANETRYPHSVAKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GELIWNFADFMTEQSPTRVLGNKKGIFTRQRQPKSAAFLLRERYWKIANETRYPHSVAKS
            400       410       420       430       440       450  

            650 
pF1KE4 QCLENSLFT
       :::::::::
NP_001 QCLENSLFT
            460 

>>XP_011514416 (OMIM: 253220,611499) PREDICTED: beta-glu  (427 aa)
 initn: 2802 init1: 2802 opt: 2802  Z-score: 3500.2  bits: 657.3 E(85289): 3.2e-188
Smith-Waterman score: 2802; 98.6% identity (99.3% similar) in 418 aa overlap (234-651:10-427)

           210       220       230       240       250       260   
pF1KE4 TYFDFFNYAGLQRSVLLYTTPTTYIDDITVTTSVEQDSGLVNYQISVKGSNLFKLEVRLL
                                     . .: . :::::::::::::::::::::::
XP_011                      MTSPSPPAWSKTVVRASGLVNYQISVKGSNLFKLEVRLL
                                    10        20        30         

           270       280       290       300       310       320   
pF1KE4 DAENKVVANGTGTQGQLKVPGVSLWWPYLMHERPAYLYSLEVQLTAQTSLGPVSDFYTLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DAENKVVANGTGTQGQLKVPGVSLWWPYLMHERPAYLYSLEVQLTAQTSLGPVSDFYTLP
      40        50        60        70        80        90         

           330       340       350       360       370       380   
pF1KE4 VGIRTVAVTKSQFLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VGIRTVAVTKSQFLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRT
     100       110       120       130       140       150         

           390       400       410       420       430       440   
pF1KE4 SHYPYAEEVMQMCDRYGIVVIDECPGVGLALPQFFNNVSLHHHMQVMEEVVRRDKNHPAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SHYPYAEEVMQMCDRYGIVVIDECPGVGLALPQFFNNVSLHHHMQVMEEVVRRDKNHPAV
     160       170       180       190       200       210         

           450       460       470       480       490       500   
pF1KE4 VMWSVANEPASHLESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYAADKGAPYVDVICLNS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VMWSVANEPASHLESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYAADKGAPYVDVICLNS
     220       230       240       250       260       270         

           510       520       530       540       550       560   
pF1KE4 YYSWYHDYGHLELIQLQLATQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YYSWYHDYGHLELIQLQLATQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQK
     280       290       300       310       320       330         

           570       580       590       600       610       620   
pF1KE4 SLLEQYHLGLDQKRRKYVVGELIWNFADFMTEQSPTRVLGNKKGIFTRQRQPKSAAFLLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLLEQYHLGLDQKRRKYVVGELIWNFADFMTEQSPTRVLGNKKGIFTRQRQPKSAAFLLR
     340       350       360       370       380       390         

           630       640       650 
pF1KE4 ERYWKIANETRYPHSVAKSQCLENSLFT
       ::::::::::::::::::::::::::::
XP_011 ERYWKIANETRYPHSVAKSQCLENSLFT
     400       410       420       

>>XP_011514415 (OMIM: 253220,611499) PREDICTED: beta-glu  (484 aa)
 initn: 2802 init1: 2802 opt: 2802  Z-score: 3499.4  bits: 657.3 E(85289): 3.5e-188
Smith-Waterman score: 2802; 98.6% identity (99.3% similar) in 418 aa overlap (234-651:67-484)

           210       220       230       240       250       260   
pF1KE4 TYFDFFNYAGLQRSVLLYTTPTTYIDDITVTTSVEQDSGLVNYQISVKGSNLFKLEVRLL
                                     . .: . :::::::::::::::::::::::
XP_011 FSTTLDCSGLYFCTRHPPPTSMTSPSPPAWSKTVVRASGLVNYQISVKGSNLFKLEVRLL
         40        50        60        70        80        90      

           270       280       290       300       310       320   
pF1KE4 DAENKVVANGTGTQGQLKVPGVSLWWPYLMHERPAYLYSLEVQLTAQTSLGPVSDFYTLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DAENKVVANGTGTQGQLKVPGVSLWWPYLMHERPAYLYSLEVQLTAQTSLGPVSDFYTLP
        100       110       120       130       140       150      

           330       340       350       360       370       380   
pF1KE4 VGIRTVAVTKSQFLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VGIRTVAVTKSQFLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRT
        160       170       180       190       200       210      

           390       400       410       420       430       440   
pF1KE4 SHYPYAEEVMQMCDRYGIVVIDECPGVGLALPQFFNNVSLHHHMQVMEEVVRRDKNHPAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SHYPYAEEVMQMCDRYGIVVIDECPGVGLALPQFFNNVSLHHHMQVMEEVVRRDKNHPAV
        220       230       240       250       260       270      

           450       460       470       480       490       500   
pF1KE4 VMWSVANEPASHLESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYAADKGAPYVDVICLNS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VMWSVANEPASHLESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYAADKGAPYVDVICLNS
        280       290       300       310       320       330      

           510       520       530       540       550       560   
pF1KE4 YYSWYHDYGHLELIQLQLATQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YYSWYHDYGHLELIQLQLATQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQK
        340       350       360       370       380       390      

           570       580       590       600       610       620   
pF1KE4 SLLEQYHLGLDQKRRKYVVGELIWNFADFMTEQSPTRVLGNKKGIFTRQRQPKSAAFLLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLLEQYHLGLDQKRRKYVVGELIWNFADFMTEQSPTRVLGNKKGIFTRQRQPKSAAFLLR
        400       410       420       430       440       450      

           630       640       650 
pF1KE4 ERYWKIANETRYPHSVAKSQCLENSLFT
       ::::::::::::::::::::::::::::
XP_011 ERYWKIANETRYPHSVAKSQCLENSLFT
        460       470       480    

>>NP_001280034 (OMIM: 253220,611499) beta-glucuronidase   (432 aa)
 initn: 2793 init1: 2793 opt: 2793  Z-score: 3488.9  bits: 655.2 E(85289): 1.4e-187
Smith-Waterman score: 2793; 100.0% identity (100.0% similar) in 410 aa overlap (242-651:23-432)

             220       230       240       250       260       270 
pF1KE4 AGLQRSVLLYTTPTTYIDDITVTTSVEQDSGLVNYQISVKGSNLFKLEVRLLDAENKVVA
                                     ::::::::::::::::::::::::::::::
NP_001         MDPGPAHKSGAEDWQCPFLCHRGLVNYQISVKGSNLFKLEVRLLDAENKVVA
                       10        20        30        40        50  

             280       290       300       310       320       330 
pF1KE4 NGTGTQGQLKVPGVSLWWPYLMHERPAYLYSLEVQLTAQTSLGPVSDFYTLPVGIRTVAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NGTGTQGQLKVPGVSLWWPYLMHERPAYLYSLEVQLTAQTSLGPVSDFYTLPVGIRTVAV
             60        70        80        90       100       110  

             340       350       360       370       380       390 
pF1KE4 TKSQFLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYAEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TKSQFLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYAEE
            120       130       140       150       160       170  

             400       410       420       430       440       450 
pF1KE4 VMQMCDRYGIVVIDECPGVGLALPQFFNNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VMQMCDRYGIVVIDECPGVGLALPQFFNNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANE
            180       190       200       210       220       230  

             460       470       480       490       500       510 
pF1KE4 PASHLESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYAADKGAPYVDVICLNSYYSWYHDY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PASHLESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYAADKGAPYVDVICLNSYYSWYHDY
            240       250       260       270       280       290  

             520       530       540       550       560       570 
pF1KE4 GHLELIQLQLATQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQKSLLEQYHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GHLELIQLQLATQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQKSLLEQYHL
            300       310       320       330       340       350  

             580       590       600       610       620       630 
pF1KE4 GLDQKRRKYVVGELIWNFADFMTEQSPTRVLGNKKGIFTRQRQPKSAAFLLRERYWKIAN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLDQKRRKYVVGELIWNFADFMTEQSPTRVLGNKKGIFTRQRQPKSAAFLLRERYWKIAN
            360       370       380       390       400       410  

             640       650 
pF1KE4 ETRYPHSVAKSQCLENSLFT
       ::::::::::::::::::::
NP_001 ETRYPHSVAKSQCLENSLFT
            420       430  

>>NP_001271219 (OMIM: 253220,611499) beta-glucuronidase   (505 aa)
 initn: 2377 init1: 2377 opt: 2377  Z-score: 2967.9  bits: 559.1 E(85289): 1.4e-158
Smith-Waterman score: 3209; 77.6% identity (77.6% similar) in 651 aa overlap (1-651:1-505)

               10        20        30        40        50        60
pF1KE4 MARGSAVAWAALGPLLWGCALGLQGGMLYPQESPSRECKELDGLWSFRADFSDNRRRGFE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MARGSAVAWAALGPLLWGCALGLQGGMLYPQESPSRECKELDGLWSFRADFSDNRRRGFE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE4 EQWYRRPLWESGPTVDMPVPSSFNDISQDWRLRHFVGWVWYEREVILPERWTQDLRTRVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EQWYRRPLWESGPTVDMPVPSSFNDISQDWRLRHFVGWVWYEREVILPERWTQDLRTRVV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE4 LRIGSAHSYAIVWVNGVDTLEHEGGYLPFEADISNLVQVGPLPSRLRITIAINNTLTPTT
       :::::::::::::::::::::::::::::::::::::::                     
NP_001 LRIGSAHSYAIVWVNGVDTLEHEGGYLPFEADISNLVQV---------------------
              130       140       150                              

              190       200       210       220       230       240
pF1KE4 LPPGTIQYLTDTSKYPKGYFVQNTYFDFFNYAGLQRSVLLYTTPTTYIDDITVTTSVEQD
                                                                   
NP_001 ------------------------------------------------------------
                                                                   

              250       260       270       280       290       300
pF1KE4 SGLVNYQISVKGSNLFKLEVRLLDAENKVVANGTGTQGQLKVPGVSLWWPYLMHERPAYL
                                                                   
NP_001 ------------------------------------------------------------
                                                                   

              310       320       330       340       350       360
pF1KE4 YSLEVQLTAQTSLGPVSDFYTLPVGIRTVAVTKSQFLINGKPFYFHGVNKHEDADIRGKG
            :::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 -----QLTAQTSLGPVSDFYTLPVGIRTVAVTKSQFLINGKPFYFHGVNKHEDADIRGKG
          160       170       180       190       200       210    

              370       380       390       400       410       420
pF1KE4 FDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVVIDECPGVGLALPQFFNN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVVIDECPGVGLALPQFFNN
          220       230       240       250       260       270    

              430       440       450       460       470       480
pF1KE4 VSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPASHLESAGYYLKMVIAHTKSLDPSRPVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPASHLESAGYYLKMVIAHTKSLDPSRPVT
          280       290       300       310       320       330    

              490       500       510       520       530       540
pF1KE4 FVSNSNYAADKGAPYVDVICLNSYYSWYHDYGHLELIQLQLATQFENWYKKYQKPIIQSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FVSNSNYAADKGAPYVDVICLNSYYSWYHDYGHLELIQLQLATQFENWYKKYQKPIIQSE
          340       350       360       370       380       390    

              550       560       570       580       590       600
pF1KE4 YGAETIAGFHQDPPLMFTEEYQKSLLEQYHLGLDQKRRKYVVGELIWNFADFMTEQSPTR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YGAETIAGFHQDPPLMFTEEYQKSLLEQYHLGLDQKRRKYVVGELIWNFADFMTEQSPTR
          400       410       420       430       440       450    

              610       620       630       640       650 
pF1KE4 VLGNKKGIFTRQRQPKSAAFLLRERYWKIANETRYPHSVAKSQCLENSLFT
       :::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLGNKKGIFTRQRQPKSAAFLLRERYWKIANETRYPHSVAKSQCLENSLFT
          460       470       480       490       500     

>>XP_005250354 (OMIM: 253220,611499) PREDICTED: beta-glu  (600 aa)
 initn: 2096 init1: 2096 opt: 2096  Z-score: 2615.6  bits: 494.1 E(85289): 6e-139
Smith-Waterman score: 4018; 92.2% identity (92.2% similar) in 651 aa overlap (1-651:1-600)

               10        20        30        40        50        60
pF1KE4 MARGSAVAWAALGPLLWGCALGLQGGMLYPQESPSRECKELDGLWSFRADFSDNRRRGFE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MARGSAVAWAALGPLLWGCALGLQGGMLYPQESPSRECKELDGLWSFRADFSDNRRRGFE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE4 EQWYRRPLWESGPTVDMPVPSSFNDISQDWRLRHFVGWVWYEREVILPERWTQDLRTRVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EQWYRRPLWESGPTVDMPVPSSFNDISQDWRLRHFVGWVWYEREVILPERWTQDLRTRVV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE4 LRIGSAHSYAIVWVNGVDTLEHEGGYLPFEADISNLVQVGPLPSRLRITIAINNTLTPTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LRIGSAHSYAIVWVNGVDTLEHEGGYLPFEADISNLVQVGPLPSRLRITIAINNTLTPTT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE4 LPPGTIQYLTDTSKYPKGYFVQNTYFDFFNYAGLQRSVLLYTTPTTYIDDITVTTSVEQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LPPGTIQYLTDTSKYPKGYFVQNTYFDFFNYAGLQRSVLLYTTPTTYIDDITVTTSVEQD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE4 SGLVNYQISVKGSNLFKLEVRLLDAENKVVANGTGTQGQLKVPGVSLWWPYLMHERPAYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SGLVNYQISVKGSNLFKLEVRLLDAENKVVANGTGTQGQLKVPGVSLWWPYLMHERPAYL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE4 YSLEVQLTAQTSLGPVSDFYTLPVGIRTVAVTKSQFLINGKPFYFHGVNKHEDADIRGKG
       ::::                                                   :::::
XP_005 YSLE---------------------------------------------------IRGKG
                                                                   

              370       380       390       400       410       420
pF1KE4 FDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVVIDECPGVGLALPQFFNN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVVIDECPGVGLALPQFFNN
     310       320       330       340       350       360         

              430       440       450       460       470       480
pF1KE4 VSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPASHLESAGYYLKMVIAHTKSLDPSRPVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPASHLESAGYYLKMVIAHTKSLDPSRPVT
     370       380       390       400       410       420         

              490       500       510       520       530       540
pF1KE4 FVSNSNYAADKGAPYVDVICLNSYYSWYHDYGHLELIQLQLATQFENWYKKYQKPIIQSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FVSNSNYAADKGAPYVDVICLNSYYSWYHDYGHLELIQLQLATQFENWYKKYQKPIIQSE
     430       440       450       460       470       480         

              550       560       570       580       590       600
pF1KE4 YGAETIAGFHQDPPLMFTEEYQKSLLEQYHLGLDQKRRKYVVGELIWNFADFMTEQSPTR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YGAETIAGFHQDPPLMFTEEYQKSLLEQYHLGLDQKRRKYVVGELIWNFADFMTEQSPTR
     490       500       510       520       530       540         

              610       620       630       640       650 
pF1KE4 VLGNKKGIFTRQRQPKSAAFLLRERYWKIANETRYPHSVAKSQCLENSLFT
       :::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VLGNKKGIFTRQRQPKSAAFLLRERYWKIANETRYPHSVAKSQCLENSLFT
     550       560       570       580       590       600

>>XP_016867582 (OMIM: 253220,611499) PREDICTED: beta-glu  (376 aa)
 initn: 2041 init1: 2041 opt: 2050  Z-score: 2561.1  bits: 483.4 E(85289): 6.4e-136
Smith-Waterman score: 2355; 86.4% identity (87.1% similar) in 418 aa overlap (234-651:10-376)

           210       220       230       240       250       260   
pF1KE4 TYFDFFNYAGLQRSVLLYTTPTTYIDDITVTTSVEQDSGLVNYQISVKGSNLFKLEVRLL
                                     . .: . :::::::::::::::::::::::
XP_016                      MTSPSPPAWSKTVVRASGLVNYQISVKGSNLFKLEVRLL
                                    10        20        30         

           270       280       290       300       310       320   
pF1KE4 DAENKVVANGTGTQGQLKVPGVSLWWPYLMHERPAYLYSLEVQLTAQTSLGPVSDFYTLP
       :::::::::::::::::::::::::::::::::::::::::                   
XP_016 DAENKVVANGTGTQGQLKVPGVSLWWPYLMHERPAYLYSLE-------------------
      40        50        60        70        80                   

           330       340       350       360       370       380   
pF1KE4 VGIRTVAVTKSQFLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRT
                                       ::::::::::::::::::::::::::::
XP_016 --------------------------------IRGKGFDWPLLVKDFNLLRWLGANAFRT
                                               90       100        

           390       400       410       420       430       440   
pF1KE4 SHYPYAEEVMQMCDRYGIVVIDECPGVGLALPQFFNNVSLHHHMQVMEEVVRRDKNHPAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SHYPYAEEVMQMCDRYGIVVIDECPGVGLALPQFFNNVSLHHHMQVMEEVVRRDKNHPAV
      110       120       130       140       150       160        

           450       460       470       480       490       500   
pF1KE4 VMWSVANEPASHLESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYAADKGAPYVDVICLNS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VMWSVANEPASHLESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYAADKGAPYVDVICLNS
      170       180       190       200       210       220        

           510       520       530       540       550       560   
pF1KE4 YYSWYHDYGHLELIQLQLATQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YYSWYHDYGHLELIQLQLATQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQK
      230       240       250       260       270       280        

           570       580       590       600       610       620   
pF1KE4 SLLEQYHLGLDQKRRKYVVGELIWNFADFMTEQSPTRVLGNKKGIFTRQRQPKSAAFLLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLLEQYHLGLDQKRRKYVVGELIWNFADFMTEQSPTRVLGNKKGIFTRQRQPKSAAFLLR
      290       300       310       320       330       340        

           630       640       650 
pF1KE4 ERYWKIANETRYPHSVAKSQCLENSLFT
       ::::::::::::::::::::::::::::
XP_016 ERYWKIANETRYPHSVAKSQCLENSLFT
      350       360       370      

>>XP_016867581 (OMIM: 253220,611499) PREDICTED: beta-glu  (410 aa)
 initn: 2041 init1: 2041 opt: 2050  Z-score: 2560.6  bits: 483.4 E(85289): 6.9e-136
Smith-Waterman score: 2655; 88.7% identity (88.7% similar) in 459 aa overlap (193-651:3-410)

            170       180       190       200       210       220  
pF1KE4 PSRLRITIAINNTLTPTTLPPGTIQYLTDTSKYPKGYFVQNTYFDFFNYAGLQRSVLLYT
                                     : ::::::::::::::::::::::::::::
XP_016                             MPSWYPKGYFVQNTYFDFFNYAGLQRSVLLYT
                                           10        20        30  

            230       240       250       260       270       280  
pF1KE4 TPTTYIDDITVTTSVEQDSGLVNYQISVKGSNLFKLEVRLLDAENKVVANGTGTQGQLKV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TPTTYIDDITVTTSVEQDSGLVNYQISVKGSNLFKLEVRLLDAENKVVANGTGTQGQLKV
             40        50        60        70        80        90  

            290       300       310       320       330       340  
pF1KE4 PGVSLWWPYLMHERPAYLYSLEVQLTAQTSLGPVSDFYTLPVGIRTVAVTKSQFLINGKP
       ::::::::::::::::::::::                                      
XP_016 PGVSLWWPYLMHERPAYLYSLE--------------------------------------
            100       110                                          

            350       360       370       380       390       400  
pF1KE4 FYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIV
                    :::::::::::::::::::::::::::::::::::::::::::::::
XP_016 -------------IRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIV
                       120       130       140       150       160 

            410       420       430       440       450       460  
pF1KE4 VIDECPGVGLALPQFFNNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPASHLESAGYY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VIDECPGVGLALPQFFNNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPASHLESAGYY
             170       180       190       200       210       220 

            470       480       490       500       510       520  
pF1KE4 LKMVIAHTKSLDPSRPVTFVSNSNYAADKGAPYVDVICLNSYYSWYHDYGHLELIQLQLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKMVIAHTKSLDPSRPVTFVSNSNYAADKGAPYVDVICLNSYYSWYHDYGHLELIQLQLA
             230       240       250       260       270       280 

            530       540       550       560       570       580  
pF1KE4 TQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQKSLLEQYHLGLDQKRRKYVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQKSLLEQYHLGLDQKRRKYVV
             290       300       310       320       330       340 

            590       600       610       620       630       640  
pF1KE4 GELIWNFADFMTEQSPTRVLGNKKGIFTRQRQPKSAAFLLRERYWKIANETRYPHSVAKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GELIWNFADFMTEQSPTRVLGNKKGIFTRQRQPKSAAFLLRERYWKIANETRYPHSVAKS
             350       360       370       380       390       400 

            650 
pF1KE4 QCLENSLFT
       :::::::::
XP_016 QCLENSLFT
             410

>>XP_016867580 (OMIM: 253220,611499) PREDICTED: beta-glu  (433 aa)
 initn: 2041 init1: 2041 opt: 2050  Z-score: 2560.2  bits: 483.4 E(85289): 7.2e-136
Smith-Waterman score: 2355; 86.4% identity (87.1% similar) in 418 aa overlap (234-651:67-433)

           210       220       230       240       250       260   
pF1KE4 TYFDFFNYAGLQRSVLLYTTPTTYIDDITVTTSVEQDSGLVNYQISVKGSNLFKLEVRLL
                                     . .: . :::::::::::::::::::::::
XP_016 FSTTLDCSGLYFCTRHPPPTSMTSPSPPAWSKTVVRASGLVNYQISVKGSNLFKLEVRLL
         40        50        60        70        80        90      

           270       280       290       300       310       320   
pF1KE4 DAENKVVANGTGTQGQLKVPGVSLWWPYLMHERPAYLYSLEVQLTAQTSLGPVSDFYTLP
       :::::::::::::::::::::::::::::::::::::::::                   
XP_016 DAENKVVANGTGTQGQLKVPGVSLWWPYLMHERPAYLYSLE-------------------
        100       110       120       130                          

           330       340       350       360       370       380   
pF1KE4 VGIRTVAVTKSQFLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRT
                                       ::::::::::::::::::::::::::::
XP_016 --------------------------------IRGKGFDWPLLVKDFNLLRWLGANAFRT
                                       140       150       160     

           390       400       410       420       430       440   
pF1KE4 SHYPYAEEVMQMCDRYGIVVIDECPGVGLALPQFFNNVSLHHHMQVMEEVVRRDKNHPAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SHYPYAEEVMQMCDRYGIVVIDECPGVGLALPQFFNNVSLHHHMQVMEEVVRRDKNHPAV
         170       180       190       200       210       220     

           450       460       470       480       490       500   
pF1KE4 VMWSVANEPASHLESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYAADKGAPYVDVICLNS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VMWSVANEPASHLESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYAADKGAPYVDVICLNS
         230       240       250       260       270       280     

           510       520       530       540       550       560   
pF1KE4 YYSWYHDYGHLELIQLQLATQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YYSWYHDYGHLELIQLQLATQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQK
         290       300       310       320       330       340     

           570       580       590       600       610       620   
pF1KE4 SLLEQYHLGLDQKRRKYVVGELIWNFADFMTEQSPTRVLGNKKGIFTRQRQPKSAAFLLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLLEQYHLGLDQKRRKYVVGELIWNFADFMTEQSPTRVLGNKKGIFTRQRQPKSAAFLLR
         350       360       370       380       390       400     

           630       640       650 
pF1KE4 ERYWKIANETRYPHSVAKSQCLENSLFT
       ::::::::::::::::::::::::::::
XP_016 ERYWKIANETRYPHSVAKSQCLENSLFT
         410       420       430   




651 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 00:02:32 2016 done: Sun Nov  6 00:02:33 2016
 Total Scan time: 10.180 Total Display time:  0.130

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com