FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4549, 651 aa 1>>>pF1KE4549 651 - 651 aa - 651 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5545+/-0.000996; mu= 17.3867+/- 0.060 mean_var=61.6013+/-12.613, 0's: 0 Z-trim(103.4): 17 B-trim: 0 in 0/49 Lambda= 0.163410 statistics sampled from 7410 (7414) to 7410 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.593), E-opt: 0.2 (0.228), width: 16 Scan time: 3.440 The best scores are: opt bits E(32554) CCDS5530.1 GUSB gene_id:2990|Hs108|chr7 ( 651) 4465 1061.7 0 CCDS64665.1 GUSB gene_id:2990|Hs108|chr7 ( 505) 2377 569.4 4.1e-162 >>CCDS5530.1 GUSB gene_id:2990|Hs108|chr7 (651 aa) initn: 4465 init1: 4465 opt: 4465 Z-score: 5682.4 bits: 1061.7 E(32554): 0 Smith-Waterman score: 4465; 100.0% identity (100.0% similar) in 651 aa overlap (1-651:1-651) 10 20 30 40 50 60 pF1KE4 MARGSAVAWAALGPLLWGCALGLQGGMLYPQESPSRECKELDGLWSFRADFSDNRRRGFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 MARGSAVAWAALGPLLWGCALGLQGGMLYPQESPSRECKELDGLWSFRADFSDNRRRGFE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 EQWYRRPLWESGPTVDMPVPSSFNDISQDWRLRHFVGWVWYEREVILPERWTQDLRTRVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 EQWYRRPLWESGPTVDMPVPSSFNDISQDWRLRHFVGWVWYEREVILPERWTQDLRTRVV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 LRIGSAHSYAIVWVNGVDTLEHEGGYLPFEADISNLVQVGPLPSRLRITIAINNTLTPTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 LRIGSAHSYAIVWVNGVDTLEHEGGYLPFEADISNLVQVGPLPSRLRITIAINNTLTPTT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 LPPGTIQYLTDTSKYPKGYFVQNTYFDFFNYAGLQRSVLLYTTPTTYIDDITVTTSVEQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 LPPGTIQYLTDTSKYPKGYFVQNTYFDFFNYAGLQRSVLLYTTPTTYIDDITVTTSVEQD 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 SGLVNYQISVKGSNLFKLEVRLLDAENKVVANGTGTQGQLKVPGVSLWWPYLMHERPAYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 SGLVNYQISVKGSNLFKLEVRLLDAENKVVANGTGTQGQLKVPGVSLWWPYLMHERPAYL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 YSLEVQLTAQTSLGPVSDFYTLPVGIRTVAVTKSQFLINGKPFYFHGVNKHEDADIRGKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 YSLEVQLTAQTSLGPVSDFYTLPVGIRTVAVTKSQFLINGKPFYFHGVNKHEDADIRGKG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 FDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVVIDECPGVGLALPQFFNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 FDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVVIDECPGVGLALPQFFNN 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 VSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPASHLESAGYYLKMVIAHTKSLDPSRPVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 VSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPASHLESAGYYLKMVIAHTKSLDPSRPVT 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE4 FVSNSNYAADKGAPYVDVICLNSYYSWYHDYGHLELIQLQLATQFENWYKKYQKPIIQSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 FVSNSNYAADKGAPYVDVICLNSYYSWYHDYGHLELIQLQLATQFENWYKKYQKPIIQSE 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE4 YGAETIAGFHQDPPLMFTEEYQKSLLEQYHLGLDQKRRKYVVGELIWNFADFMTEQSPTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 YGAETIAGFHQDPPLMFTEEYQKSLLEQYHLGLDQKRRKYVVGELIWNFADFMTEQSPTR 550 560 570 580 590 600 610 620 630 640 650 pF1KE4 VLGNKKGIFTRQRQPKSAAFLLRERYWKIANETRYPHSVAKSQCLENSLFT ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 VLGNKKGIFTRQRQPKSAAFLLRERYWKIANETRYPHSVAKSQCLENSLFT 610 620 630 640 650 >>CCDS64665.1 GUSB gene_id:2990|Hs108|chr7 (505 aa) initn: 2377 init1: 2377 opt: 2377 Z-score: 3023.9 bits: 569.4 E(32554): 4.1e-162 Smith-Waterman score: 3209; 77.6% identity (77.6% similar) in 651 aa overlap (1-651:1-505) 10 20 30 40 50 60 pF1KE4 MARGSAVAWAALGPLLWGCALGLQGGMLYPQESPSRECKELDGLWSFRADFSDNRRRGFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 MARGSAVAWAALGPLLWGCALGLQGGMLYPQESPSRECKELDGLWSFRADFSDNRRRGFE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 EQWYRRPLWESGPTVDMPVPSSFNDISQDWRLRHFVGWVWYEREVILPERWTQDLRTRVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 EQWYRRPLWESGPTVDMPVPSSFNDISQDWRLRHFVGWVWYEREVILPERWTQDLRTRVV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 LRIGSAHSYAIVWVNGVDTLEHEGGYLPFEADISNLVQVGPLPSRLRITIAINNTLTPTT ::::::::::::::::::::::::::::::::::::::: CCDS64 LRIGSAHSYAIVWVNGVDTLEHEGGYLPFEADISNLVQV--------------------- 130 140 150 190 200 210 220 230 240 pF1KE4 LPPGTIQYLTDTSKYPKGYFVQNTYFDFFNYAGLQRSVLLYTTPTTYIDDITVTTSVEQD CCDS64 ------------------------------------------------------------ 250 260 270 280 290 300 pF1KE4 SGLVNYQISVKGSNLFKLEVRLLDAENKVVANGTGTQGQLKVPGVSLWWPYLMHERPAYL CCDS64 ------------------------------------------------------------ 310 320 330 340 350 360 pF1KE4 YSLEVQLTAQTSLGPVSDFYTLPVGIRTVAVTKSQFLINGKPFYFHGVNKHEDADIRGKG ::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 -----QLTAQTSLGPVSDFYTLPVGIRTVAVTKSQFLINGKPFYFHGVNKHEDADIRGKG 160 170 180 190 200 210 370 380 390 400 410 420 pF1KE4 FDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVVIDECPGVGLALPQFFNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 FDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVVIDECPGVGLALPQFFNN 220 230 240 250 260 270 430 440 450 460 470 480 pF1KE4 VSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPASHLESAGYYLKMVIAHTKSLDPSRPVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 VSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPASHLESAGYYLKMVIAHTKSLDPSRPVT 280 290 300 310 320 330 490 500 510 520 530 540 pF1KE4 FVSNSNYAADKGAPYVDVICLNSYYSWYHDYGHLELIQLQLATQFENWYKKYQKPIIQSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 FVSNSNYAADKGAPYVDVICLNSYYSWYHDYGHLELIQLQLATQFENWYKKYQKPIIQSE 340 350 360 370 380 390 550 560 570 580 590 600 pF1KE4 YGAETIAGFHQDPPLMFTEEYQKSLLEQYHLGLDQKRRKYVVGELIWNFADFMTEQSPTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 YGAETIAGFHQDPPLMFTEEYQKSLLEQYHLGLDQKRRKYVVGELIWNFADFMTEQSPTR 400 410 420 430 440 450 610 620 630 640 650 pF1KE4 VLGNKKGIFTRQRQPKSAAFLLRERYWKIANETRYPHSVAKSQCLENSLFT ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 VLGNKKGIFTRQRQPKSAAFLLRERYWKIANETRYPHSVAKSQCLENSLFT 460 470 480 490 500 651 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 00:02:31 2016 done: Sun Nov 6 00:02:31 2016 Total Scan time: 3.440 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]