FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB5844, 484 aa 1>>>pF1KB5844 484 - 484 aa - 484 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.4435+/-0.000782; mu= 10.1630+/- 0.048 mean_var=147.5180+/-29.646, 0's: 0 Z-trim(113.6): 3 B-trim: 67 in 1/52 Lambda= 0.105597 statistics sampled from 14227 (14229) to 14227 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.758), E-opt: 0.2 (0.437), width: 16 Scan time: 3.520 The best scores are: opt bits E(32554) CCDS7537.1 SUFU gene_id:51684|Hs108|chr10 ( 484) 3348 521.4 8.7e-148 CCDS53571.1 SUFU gene_id:51684|Hs108|chr10 ( 433) 3009 469.7 2.8e-132 >>CCDS7537.1 SUFU gene_id:51684|Hs108|chr10 (484 aa) initn: 3348 init1: 3348 opt: 3348 Z-score: 2766.7 bits: 521.4 E(32554): 8.7e-148 Smith-Waterman score: 3348; 100.0% identity (100.0% similar) in 484 aa overlap (1-484:1-484) 10 20 30 40 50 60 pF1KB5 MAELRPSGAPGPTAPPAPGPTAPPAFASLFPPGLHAIYGECRRLYPDQPNPLQVTAIVKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 MAELRPSGAPGPTAPPAPGPTAPPAFASLFPPGLHAIYGECRRLYPDQPNPLQVTAIVKY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 WLGGPDPLDYVSMYRNVGSPSANIPEHWHYISFGLSDLYGDNRVHEFTGTDGPSGFGFEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 WLGGPDPLDYVSMYRNVGSPSANIPEHWHYISFGLSDLYGDNRVHEFTGTDGPSGFGFEL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB5 TFRLKRETGESAPPTWPAELMQGLARYVFQSENTFCSGDHVSWHSPLDNSESRIQHMLLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 TFRLKRETGESAPPTWPAELMQGLARYVFQSENTFCSGDHVSWHSPLDNSESRIQHMLLT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB5 EDPQMQPVQTPFGVVTFLQIVGVCTEELHSAQQWNGQGILELLRTVPIAGGPWLITDMRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 EDPQMQPVQTPFGVVTFLQIVGVCTEELHSAQQWNGQGILELLRTVPIAGGPWLITDMRR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB5 GETIFEIDPHLQERVDKGIETDGSNLSGVSAKCAWDDLSRPPEDDEDSRSICIGTQPRRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 GETIFEIDPHLQERVDKGIETDGSNLSGVSAKCAWDDLSRPPEDDEDSRSICIGTQPRRL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB5 SGKDTEQIRETLRRGLEINSKPVLPPINPQRQNGLAHDRAPSRKDSLESDSSTAIIPHEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 SGKDTEQIRETLRRGLEINSKPVLPPINPQRQNGLAHDRAPSRKDSLESDSSTAIIPHEL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB5 IRTRQLESVHLKFNQESGALIPLCLRGRLLHGRHFTYKSITGDMAITFVSTGVEGAFATE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 IRTRQLESVHLKFNQESGALIPLCLRGRLLHGRHFTYKSITGDMAITFVSTGVEGAFATE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB5 EHPYAAHGPWLQILLTEEFVEKMLEDLEDLTSPEEFKLPKEYSWPEKKLKVSILPDVVFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 EHPYAAHGPWLQILLTEEFVEKMLEDLEDLTSPEEFKLPKEYSWPEKKLKVSILPDVVFD 430 440 450 460 470 480 pF1KB5 SPLH :::: CCDS75 SPLH >>CCDS53571.1 SUFU gene_id:51684|Hs108|chr10 (433 aa) initn: 3107 init1: 3009 opt: 3009 Z-score: 2488.3 bits: 469.7 E(32554): 2.8e-132 Smith-Waterman score: 3009; 99.8% identity (100.0% similar) in 433 aa overlap (1-433:1-433) 10 20 30 40 50 60 pF1KB5 MAELRPSGAPGPTAPPAPGPTAPPAFASLFPPGLHAIYGECRRLYPDQPNPLQVTAIVKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 MAELRPSGAPGPTAPPAPGPTAPPAFASLFPPGLHAIYGECRRLYPDQPNPLQVTAIVKY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 WLGGPDPLDYVSMYRNVGSPSANIPEHWHYISFGLSDLYGDNRVHEFTGTDGPSGFGFEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 WLGGPDPLDYVSMYRNVGSPSANIPEHWHYISFGLSDLYGDNRVHEFTGTDGPSGFGFEL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB5 TFRLKRETGESAPPTWPAELMQGLARYVFQSENTFCSGDHVSWHSPLDNSESRIQHMLLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 TFRLKRETGESAPPTWPAELMQGLARYVFQSENTFCSGDHVSWHSPLDNSESRIQHMLLT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB5 EDPQMQPVQTPFGVVTFLQIVGVCTEELHSAQQWNGQGILELLRTVPIAGGPWLITDMRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 EDPQMQPVQTPFGVVTFLQIVGVCTEELHSAQQWNGQGILELLRTVPIAGGPWLITDMRR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB5 GETIFEIDPHLQERVDKGIETDGSNLSGVSAKCAWDDLSRPPEDDEDSRSICIGTQPRRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 GETIFEIDPHLQERVDKGIETDGSNLSGVSAKCAWDDLSRPPEDDEDSRSICIGTQPRRL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB5 SGKDTEQIRETLRRGLEINSKPVLPPINPQRQNGLAHDRAPSRKDSLESDSSTAIIPHEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 SGKDTEQIRETLRRGLEINSKPVLPPINPQRQNGLAHDRAPSRKDSLESDSSTAIIPHEL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB5 IRTRQLESVHLKFNQESGALIPLCLRGRLLHGRHFTYKSITGDMAITFVSTGVEGAFATE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 IRTRQLESVHLKFNQESGALIPLCLRGRLLHGRHFTYKSITGDMAITFVSTGVEGAFATE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB5 EHPYAAHGPWLQILLTEEFVEKMLEDLEDLTSPEEFKLPKEYSWPEKKLKVSILPDVVFD ::::::::::::. CCDS53 EHPYAAHGPWLQL 430 484 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 01:33:54 2016 done: Mon Nov 7 01:33:55 2016 Total Scan time: 3.520 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]