FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1523, 370 aa 1>>>pF1KE1523 370 - 370 aa - 370 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4918+/-0.000878; mu= 15.6463+/- 0.053 mean_var=64.0446+/-12.937, 0's: 0 Z-trim(105.2): 19 B-trim: 0 in 0/51 Lambda= 0.160263 statistics sampled from 8312 (8319) to 8312 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.63), E-opt: 0.2 (0.256), width: 16 Scan time: 2.490 The best scores are: opt bits E(32554) CCDS5533.1 TPST1 gene_id:8460|Hs108|chr7 ( 370) 2484 583.1 1.3e-166 CCDS13839.1 TPST2 gene_id:8459|Hs108|chr22 ( 377) 1625 384.5 8.4e-107 >>CCDS5533.1 TPST1 gene_id:8460|Hs108|chr7 (370 aa) initn: 2484 init1: 2484 opt: 2484 Z-score: 3104.4 bits: 583.1 E(32554): 1.3e-166 Smith-Waterman score: 2484; 100.0% identity (100.0% similar) in 370 aa overlap (1-370:1-370) 10 20 30 40 50 60 pF1KE1 MVGKLKQNLLLACLVISSVTVFYLGQHAMECHHRIEERSQPVKLESTRTTVRTGLDLKAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 MVGKLKQNLLLACLVISSVTVFYLGQHAMECHHRIEERSQPVKLESTRTTVRTGLDLKAN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 KTFAYHKDMPLIFIGGVPRSGTTLMRAMLDAHPDIRCGEETRVIPRILALKQMWSRSSKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 KTFAYHKDMPLIFIGGVPRSGTTLMRAMLDAHPDIRCGEETRVIPRILALKQMWSRSSKE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 KIRLDEAGVTDEVLDSAMQAFLLEIIVKHGEPAPYLCNKDPFALKSLTYLSRLFPNAKFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 KIRLDEAGVTDEVLDSAMQAFLLEIIVKHGEPAPYLCNKDPFALKSLTYLSRLFPNAKFL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 LMVRDGRASVHSMISRKVTIAGFDLNSYRDCLTKWNRAIETMYNQCMEVGYKKCMLVHYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 LMVRDGRASVHSMISRKVTIAGFDLNSYRDCLTKWNRAIETMYNQCMEVGYKKCMLVHYE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 QLVLHPERWMRTLLKFLQIPWNHSVLHHEEMIGKAGGVSLSKVERSTDQVIKPVNVGALS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 QLVLHPERWMRTLLKFLQIPWNHSVLHHEEMIGKAGGVSLSKVERSTDQVIKPVNVGALS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 KWVGKIPPDVLQDMAVIAPMLAKLGYDPYANPPNYGKPDPKIIENTRRVYKGEFQLPDFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 KWVGKIPPDVLQDMAVIAPMLAKLGYDPYANPPNYGKPDPKIIENTRRVYKGEFQLPDFL 310 320 330 340 350 360 370 pF1KE1 KEKPQTEQVE :::::::::: CCDS55 KEKPQTEQVE 370 >>CCDS13839.1 TPST2 gene_id:8459|Hs108|chr22 (377 aa) initn: 1635 init1: 1597 opt: 1625 Z-score: 2030.9 bits: 384.5 E(32554): 8.4e-107 Smith-Waterman score: 1625; 65.9% identity (84.6% similar) in 369 aa overlap (5-368:5-367) 10 20 30 40 50 pF1KE1 MVGKLKQNLLLACLVISSVTVFYLGQHAMECHHRIEERSQPVKLESTRTTVRTGLD---- ... :: : .. : . :::...:: :. . :.: : ..: . CCDS13 MRLSVRRVLLAAGCALVLVLAVQLGQQVLEC------RAVLAGLRSPRGAMRPEQEELVM 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 LKANKT-FAYHKDMPLIFIGGVPRSGTTLMRAMLDAHPDIRCGEETRVIPRILALKQMWS . .:.. . : : :::::.:::::::::::::::::::..:::::::.:::.::..: :: CCDS13 VGTNHVEYRYGKAMPLIFVGGVPRSGTTLMRAMLDAHPEVRCGEETRIIPRVLAMRQAWS 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 RSSKEKIRLDEAGVTDEVLDSAMQAFLLEIIVKHGEPAPYLCNKDPFALKSLTYLSRLFP .:..::.:::::::::::::.:::::.::.:.:::::: :::::::.::: .::::::: CCDS13 KSGREKLRLDEAGVTDEVLDAAMQAFILEVIAKHGEPARVLCNKDPFTLKSSVYLSRLFP 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE1 NAKFLLMVRDGRASVHSMISRKVTIAGFDLNSYRDCLTKWNRAIETMYNQCMEVGYKKCM :.:::::::::::::::::.::::::::::.::::::::::.:::.:: :::::: .::. CCDS13 NSKFLLMVRDGRASVHSMITRKVTIAGFDLSSYRDCLTKWNKAIEVMYAQCMEVGKEKCL 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE1 LVHYEQLVLHPERWMRTLLKFLQIPWNHSVLHHEEMIGKAGGVSLSKVERSTDQVIKPVN :.::::::::.: .. .: :: : :. .:::::..::: :::::::.:::::::::::: CCDS13 PVYYEQLVLHPRRSLKLILDFLGIAWSDAVLHHEDLIGKPGGVSLSKIERSTDQVIKPVN 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE1 VGALSKWVGKIPPDVLQDMAVIAPMLAKLGYDPYANPPNYGKPDPKIIENTRRVYKGEFQ . :::::.:.:: ::..::: ::::::.:::::::::::::.::: .:.::.:: ::... CCDS13 LEALSKWTGHIPGDVVRDMAQIAPMLAQLGYDPYANPPNYGNPDPFVINNTQRVLKGDYK 300 310 320 330 340 350 360 370 pF1KE1 LPDFLKEKPQTEQVE : :: :..: CCDS13 TPANLKGYFQVNQNSTSSHLGSS 360 370 370 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 01:34:44 2016 done: Mon Nov 7 01:34:44 2016 Total Scan time: 2.490 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]